RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 CLEC10AQ8IUN9 316 aa17.78■□□□□ 0.44
MAP1LC3B-201ENST00000268607 COG1Q8WTW3 980 aa17.78■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CPVLQ9H3G5 476 aa17.78■□□□□ 0.44
MAP1LC3B-201ENST00000268607 ABHD10Q9NUJ1 306 aa17.78■□□□□ 0.44
MAP1LC3B-201ENST00000268607 FLT1P17948 1338 aa17.78■□□□□ 0.44
MAP1LC3B-201ENST00000268607 MYO1AQ9UBC5 1043 aa17.78■□□□□ 0.44
MAP1LC3B-201ENST00000268607 A0A087X0B3 334 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PSMD14O00487 310 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 LDHCP07864 332 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 TSPY3P0CV98 308 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 TSPY8P0CW00 308 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CRKP46108 304 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 SHROOM1Q2M3G4 852 aaPredicted RBP17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 DALRD3Q5D0E6 543 aaKnown RBP17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CDKAL1Q5VV42 579 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 APOBEC3HQ6NTF7 200 aaKnown RBP17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CDC42EP5Q6NZY7 148 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 GBP6Q6ZN66 633 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 PNMA1Q8ND90 353 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 SPATA20Q8TB22 786 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 RASGRP4Q8TDF6 673 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CAPZA3Q96KX2 299 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 NUP88Q99567 741 aaPredicted RBP17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 AGPSO00116 658 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 GOLGA8HP0CJ92 632 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 INPP5BP32019 993 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 MAP9Q49MG5 647 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 RPAINQ86UA6 219 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 STAMQ92783 540 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CTAGE1Q96RT6 745 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 SGIP1Q9BQI5 828 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 CRACR2AQ9BSW2 395 aa17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 TDRD3Q9H7E2 651 aaKnown RBP17.77■□□□□ 0.44
MAP1LC3B-201ENST00000268607 MYBL2P10244 700 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 SCG2P13521 617 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 FECHP22830 423 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 IRAK1P51617 712 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 CUL4BQ13620 913 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 TRAPPC11Q7Z392 1133 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 FAM76AQ8TAV0 307 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 CCDC51Q96ER9 411 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 HINFPQ9BQA5 517 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 TFR2Q9UP52 801 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 CLRN2A0PK11 232 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 SHOX2O60902 331 aaPredicted RBP17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 EIF6P56537 245 aaKnown RBP17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 PPP2R5AQ15172 486 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 CYP26C1Q6V0L0 522 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 ZNF444Q8N0Y2 327 aaPredicted RBP17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 CEP131Q9UPN4 1083 aa17.76■□□□□ 0.43
MAP1LC3B-201ENST00000268607 ATP1A1P05023 1023 aaKnown RBP17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 MCM7P33993 719 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 PTGDRQ13258 359 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 KANK3Q6NY19 840 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 BCAS4Q8TDM0 211 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 TEKT1Q969V4 418 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 CHP1Q99653 195 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 MYH8P13535 1937 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 GOLGA6CA6NDK9 693 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 MYO1FO00160 1098 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 GOLGA6DP0CG33 693 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 PPP4CP60510 307 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 RBM26Q5T8P6 1007 aaKnown RBP17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 GIMAP7Q8NHV1 300 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 SYMPKQ92797 1274 aaKnown RBP17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 PRMT6Q96LA8 375 aaPredicted RBP17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 VPS16Q9H269 839 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 GOLGA6AQ9NYA3 693 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 CAPN7Q9Y6W3 813 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 N4BP3O15049 544 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 PRELPP51888 382 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 TTC38Q5R3I4 469 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 STRIP1Q5VSL9 837 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 SNED1Q8TER0 1413 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 TNFRSF25Q93038 417 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 SELENOOQ9BVL4 669 aa17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 REXO2Q9Y3B8 237 aaKnown RBP17.75■□□□□ 0.43
MAP1LC3B-201ENST00000268607 NFKBIEO00221 500 aa17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 SETQ01105 290 aaPredicted RBP17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 TTC19Q6DKK2 380 aaPredicted RBP17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 TYW1BQ6NUM6 668 aa17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 PRPF38AQ8NAV1 312 aaKnown RBP17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 SAMM50Q9Y512 469 aa17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 ITIH6Q6UXX5 1313 aa17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 MCM3P25205 808 aa17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 KRT9P35527 623 aa17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 KRT31Q15323 416 aa17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 PFKFB3Q16875 520 aaPredicted RBP17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 SLC35G1Q2M3R5 365 aa17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 EGFL6Q8IUX8 553 aa17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 AMOTL1Q8IY63 956 aa17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 CD248Q9HCU0 757 aa17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 SAR1BQ9Y6B6 198 aa17.74■□□□□ 0.43
MAP1LC3B-201ENST00000268607 GAKO14976 1311 aa17.73■□□□□ 0.43
MAP1LC3B-201ENST00000268607 EGFRP00533 1210 aa17.73■□□□□ 0.43
MAP1LC3B-201ENST00000268607 DPYDQ12882 1025 aa17.73■□□□□ 0.43
MAP1LC3B-201ENST00000268607 POTEDQ86YR6 584 aa17.73■□□□□ 0.43
MAP1LC3B-201ENST00000268607 ZSCAN29Q8IWY8 852 aaPredicted RBP17.73■□□□□ 0.43
MAP1LC3B-201ENST00000268607 RTKN2Q8IZC4 609 aa17.73■□□□□ 0.43
MAP1LC3B-201ENST00000268607 BCCIPQ9P287 314 aaKnown RBP eCLIP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms