RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 SMYD4Q8IYR2 804 aaPredicted RBP13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 DDX25Q9UHL0 483 aaKnown RBP13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 TLK1Q9UKI8 766 aa13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 WDR7Q9Y4E6 1490 aa13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 E7EWF7 191 aa13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 MAP3K7O43318 606 aa13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 DARS2Q6PI48 645 aaKnown RBP13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 ATAD2BQ9ULI0 1458 aa13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 H2AFZP0C0S5 128 aa13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 KCNA4P22459 653 aa13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 H2AFVQ71UI9 128 aa13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 LLPHQ9BRT6 129 aaKnown RBP13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 CCDC90BQ9GZT6 254 aa13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 NT5C3AQ9H0P0 336 aa13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 SEPT9Q9UHD8 586 aaPredicted RBP13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 NCAPD3P42695 1498 aa13.52□□□□□ -0.25
ARFGEF1-201ENST00000262215 H0Y3Z8 333 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 SPICE1Q8N0Z3 855 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 EPRSP07814 1512 aaKnown RBP13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 CLIC2O15247 247 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 HEXIM1O94992 359 aaKnown RBP13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 SLC7A5Q01650 507 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 ABI1Q8IZP0 508 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 SMYD3Q9H7B4 428 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 DAAM1Q9Y4D1 1078 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 KITP10721 976 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 EPHB1P54762 984 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 PKP1Q13835 747 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 GNPTABQ3T906 1256 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 ZBTB33Q86T24 672 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 WDR48Q8TAF3 677 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 OTULINQ96BN8 352 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 BTG4Q9NY30 223 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 SCOCQ9UIL1 159 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 MYO1FO00160 1098 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 FTCDO95954 541 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 MYL7Q01449 175 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 ZNF654Q8IZM8 581 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 EIF2AQ9BY44 585 aaKnown RBP13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 CPSF3Q9UKF6 684 aaKnown RBP13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 USP17L12C9JPN9 530 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 USP17L21D6R901 530 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 SKOR1P84550 965 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 SLC35F6Q8N357 371 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 DEPDC1BQ8WUY9 529 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 CSRNP1Q96S65 589 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 NXF1Q9UBU9 619 aaKnown RBP13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 PPIP5K2O43314 1243 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 ESRRBO95718 433 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 MAPK4P31152 587 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 LRRC23Q53EV4 343 aaPredicted RBP13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 SGO2Q562F6 1265 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 FAM180AQ6UWF9 173 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 N4BP2L2Q92802 583 aaPredicted RBP13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 GLT8D2Q9H1C3 349 aa13.51□□□□□ -0.25
ARFGEF1-201ENST00000262215 ME3Q16798 604 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 C16orf87Q6PH81 154 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 CSADQ9Y600 493 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 STK24Q9Y6E0 443 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 RNMTO43148 476 aaKnown RBP13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 CTNND1O60716 968 aaKnown RBP13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 HADHAP40939 763 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 SUPT20HQ8NEM7 779 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 GOLGA5Q8TBA6 731 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 ZBTB40Q9NUA8 1239 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 RNASELQ05823 741 aaKnown RBP13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 CDO1Q16878 200 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 EXOC3L4Q17RC7 722 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 TYW5A2RUC4 315 aaKnown RBP13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 PDE8AO60658 829 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 CD58P19256 250 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 PPARAQ07869 468 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 SCARA5Q6ZMJ2 495 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 PLA2G4DQ86XP0 818 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 SLC24A3Q9HC58 644 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 KIAA1468Q9P260 1216 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 PNMA2Q9UL42 364 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 E2F6O75461 281 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 MT-ND3P03897 115 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 KRT1P04264 644 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 CASP14P31944 242 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 SLMAPQ14BN4 828 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 NRBP1Q9UHY1 535 aa13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 ZBTB12Q9Y330 459 aaPredicted RBP13.5□□□□□ -0.25
ARFGEF1-201ENST00000262215 KRT14P02533 472 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 RPN1P04843 607 aaKnown RBP13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 ADD1P35611 737 aaKnown RBP13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 ARHGEF18Q6ZSZ5 1173 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 KCTD6Q8NC69 237 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 SUCLG2Q96I99 432 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 POLIQ9UNA4 740 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 ZSCAN9O15535 394 aaPredicted RBP13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 GSPT1P15170 499 aaKnown RBP13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 POLR2BP30876 1174 aaKnown RBP13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 ATG16L1Q676U5 607 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 BLIDQ8IZY5 108 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 PI4K2BQ8TCG2 481 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 NEUROG2Q9H2A3 272 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 KDM3AQ9Y4C1 1321 aa13.49□□□□□ -0.25
ARFGEF1-201ENST00000262215 HNRNPDLO14979 420 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms