RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 PLIN2Q99541 437 aa21.07■□□□□ 0.96
SNX4-201ENST00000251775 NCAPGQ9BPX3 1015 aa21.07■□□□□ 0.96
SNX4-201ENST00000251775 SPZ1Q9BXG8 430 aa21.07■□□□□ 0.96
SNX4-201ENST00000251775 ZNF287Q9HBT7 754 aa21.07■□□□□ 0.96
SNX4-201ENST00000251775 FAM184BQ9ULE4 1060 aa21.07■□□□□ 0.96
SNX4-201ENST00000251775 TRIM49BA6NDI0 452 aa21.06■□□□□ 0.96
SNX4-201ENST00000251775 H7C1D1 291 aa21.06■□□□□ 0.96
SNX4-201ENST00000251775 MFSD14BQ5SR56 506 aa21.06■□□□□ 0.96
SNX4-201ENST00000251775 USP17L2Q6R6M4 530 aa21.06■□□□□ 0.96
SNX4-201ENST00000251775 LRRC15Q8TF66 581 aa21.06■□□□□ 0.96
SNX4-201ENST00000251775 ZMYND12Q9H0C1 365 aa21.06■□□□□ 0.96
SNX4-201ENST00000251775 ADRA2BP18089 450 aa21.06■□□□□ 0.96
SNX4-201ENST00000251775 MEA1Q16626 185 aa21.06■□□□□ 0.96
SNX4-201ENST00000251775 SWT1Q5T5J6 900 aaKnown RBP21.06■□□□□ 0.96
SNX4-201ENST00000251775 MCTP2Q6DN12 878 aa21.06■□□□□ 0.96
SNX4-201ENST00000251775 GJD4Q96KN9 370 aaPredicted RBP21.06■□□□□ 0.96
SNX4-201ENST00000251775 POLLQ9UGP5 575 aa21.06■□□□□ 0.96
SNX4-201ENST00000251775 TSR1Q2NL82 804 aaKnown RBP21.05■□□□□ 0.96
SNX4-201ENST00000251775 CEP95Q96GE4 821 aa21.05■□□□□ 0.96
SNX4-201ENST00000251775 RBM17Q96I25 401 aaKnown RBP21.05■□□□□ 0.96
SNX4-201ENST00000251775 HINFPQ9BQA5 517 aa21.05■□□□□ 0.96
SNX4-201ENST00000251775 CAPS2Q9BXY5 557 aa21.05■□□□□ 0.96
SNX4-201ENST00000251775 ANO9A1A5B4 782 aa21.05■□□□□ 0.96
SNX4-201ENST00000251775 EIF3HO15372 352 aaKnown RBP eCLIP21.05■□□□□ 0.96
SNX4-201ENST00000251775 UBA7P41226 1012 aa21.05■□□□□ 0.96
SNX4-201ENST00000251775 NAPAP54920 295 aa21.05■□□□□ 0.96
SNX4-201ENST00000251775 RASSF8Q8NHQ8 419 aa21.05■□□□□ 0.96
SNX4-201ENST00000251775 BCAS4Q8TDM0 211 aa21.05■□□□□ 0.96
SNX4-201ENST00000251775 CCSER1Q9C0I3 900 aa21.05■□□□□ 0.96
SNX4-201ENST00000251775 DUSP10Q9Y6W6 482 aa21.05■□□□□ 0.96
SNX4-201ENST00000251775 KLRC4O43908 158 aa21.04■□□□□ 0.96
SNX4-201ENST00000251775 TBC1D16Q8TBP0 767 aa21.04■□□□□ 0.96
SNX4-201ENST00000251775 RRP36Q96EU6 259 aaKnown RBP21.04■□□□□ 0.96
SNX4-201ENST00000251775 PURBQ96QR8 312 aaKnown RBP21.04■□□□□ 0.96
SNX4-201ENST00000251775 RABEP2Q9H5N1 569 aa21.04■□□□□ 0.96
SNX4-201ENST00000251775 IDEP14735 1019 aa21.04■□□□□ 0.96
SNX4-201ENST00000251775 PMS1P54277 932 aaKnown RBP21.04■□□□□ 0.96
SNX4-201ENST00000251775 ADSSL1Q8N142 457 aa21.04■□□□□ 0.96
SNX4-201ENST00000251775 FAM163AQ96GL9 167 aaPredicted RBP21.04■□□□□ 0.96
SNX4-201ENST00000251775 SH3GL2Q99962 352 aa21.04■□□□□ 0.96
SNX4-201ENST00000251775 FOCADQ5VW36 1801 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 LAD1O00515 517 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 PLCG2P16885 1265 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 PRPHP41219 470 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 EZH2Q15910 746 aaKnown RBP21.03■□□□□ 0.96
SNX4-201ENST00000251775 SND1Q7KZF4 910 aaKnown RBP eCLIP21.03■□□□□ 0.96
SNX4-201ENST00000251775 CEP89Q96ST8 783 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 MYCBPQ99417 103 aaPredicted RBP21.03■□□□□ 0.96
SNX4-201ENST00000251775 TTYH3Q9C0H2 523 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 VAT1LQ9HCJ6 419 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 JADE2Q9NQC1 790 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 KBTBD4Q9NVX7 518 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 GAKO14976 1311 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 SMCO2A6NFE2 343 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 PES1O00541 588 aaKnown RBP21.03■□□□□ 0.96
SNX4-201ENST00000251775 CYLC1P35663 651 aaPredicted RBP21.03■□□□□ 0.96
SNX4-201ENST00000251775 GBP6Q6ZN66 633 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 HDAC7Q8WUI4 952 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 AGPAT5Q9NUQ2 364 aa21.03■□□□□ 0.96
SNX4-201ENST00000251775 GNGT1P63211 74 aa21.02■□□□□ 0.96
SNX4-201ENST00000251775 LETM2Q2VYF4 491 aa21.02■□□□□ 0.96
SNX4-201ENST00000251775 CREG2Q8IUH2 290 aa21.02■□□□□ 0.96
SNX4-201ENST00000251775 MMGT1Q8N4V1 131 aa21.02■□□□□ 0.96
SNX4-201ENST00000251775 NHEJ1Q9H9Q4 299 aaPredicted RBP21.02■□□□□ 0.96
SNX4-201ENST00000251775 LOC102724159A0A0B4J2E5 919 aa21.02■□□□□ 0.95
SNX4-201ENST00000251775 BBOX1O75936 387 aa21.02■□□□□ 0.95
SNX4-201ENST00000251775 EEF1GP26641 437 aaKnown RBP21.02■□□□□ 0.95
SNX4-201ENST00000251775 KCNB1Q14721 858 aa21.02■□□□□ 0.95
SNX4-201ENST00000251775 PWP2Q15269 919 aaKnown RBP21.02■□□□□ 0.95
SNX4-201ENST00000251775 IQCEQ6IPM2 695 aa21.02■□□□□ 0.95
SNX4-201ENST00000251775 KRT25Q7Z3Z0 450 aa21.02■□□□□ 0.95
SNX4-201ENST00000251775 PIGSQ96S52 555 aa21.02■□□□□ 0.95
SNX4-201ENST00000251775 DMGDHQ9UI17 866 aaKnown RBP21.02■□□□□ 0.95
SNX4-201ENST00000251775 MACROD2A1Z1Q3 448 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 RASSF10A6NK89 507 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 GOLGA8KD6RF30 607 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 NONOQ15233 471 aaKnown RBP eCLIP21.01■□□□□ 0.95
SNX4-201ENST00000251775 KCNV1Q6PIU1 500 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 UBA5Q9GZZ9 404 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 SHTN1A0MZ66 631 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 USP17L5A8MUK1 530 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 CCNT1O60563 726 aaKnown RBP21.01■□□□□ 0.95
SNX4-201ENST00000251775 OR52Z1P0C646 297 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 HNRNPH1P31943 449 aaKnown RBP21.01■□□□□ 0.95
SNX4-201ENST00000251775 NOVP48745 357 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 DDR1Q08345 913 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 FBXW10Q5XX13 1052 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 LRRC1Q9BTT6 524 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 C6orf50Q9HD87 102 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 SPATA31A6Q5VVP1 1343 aa21.01■□□□□ 0.95
SNX4-201ENST00000251775 C6orf229H3BNL8 230 aa21■□□□□ 0.95
SNX4-201ENST00000251775 SRGNP10124 158 aa21■□□□□ 0.95
SNX4-201ENST00000251775 TXNRD1Q16881 649 aa21■□□□□ 0.95
SNX4-201ENST00000251775 TTC19Q6DKK2 380 aaPredicted RBP21■□□□□ 0.95
SNX4-201ENST00000251775 CCDC70Q6NSX1 233 aa21■□□□□ 0.95
SNX4-201ENST00000251775 SNX12Q9UMY4 172 aa21■□□□□ 0.95
SNX4-201ENST00000251775 DAGLAQ9Y4D2 1042 aa21■□□□□ 0.95
SNX4-201ENST00000251775 LTBP1Q14766 1721 aa21■□□□□ 0.95
SNX4-201ENST00000251775 RHOBTB3O94955 611 aa21■□□□□ 0.95
SNX4-201ENST00000251775 PLCG1P19174 1290 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms