RNA–Protein interactions for RNA: ENST00000250823.4

VCY1B-201, Transcript of variable charge Y-linked 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCY1B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCY1B-201ENST00000250823 TIMP1P01033 207 aa22.24■■□□□ 1.15
VCY1B-201ENST00000250823 TXNP10599 105 aaKnown RBP22.24■■□□□ 1.15
VCY1B-201ENST00000250823 HSD17B4P51659 736 aa22.24■■□□□ 1.15
VCY1B-201ENST00000250823 FPGSQ05932 587 aa22.24■■□□□ 1.15
VCY1B-201ENST00000250823 ITGA7Q13683 1181 aa22.24■■□□□ 1.15
VCY1B-201ENST00000250823 NECTIN1Q15223 517 aa22.24■■□□□ 1.15
VCY1B-201ENST00000250823 ARHGEF16Q5VV41 709 aa22.24■■□□□ 1.15
VCY1B-201ENST00000250823 CREB3L3Q68CJ9 461 aa22.24■■□□□ 1.15
VCY1B-201ENST00000250823 HOMER1Q86YM7 354 aa22.24■■□□□ 1.15
VCY1B-201ENST00000250823 FAM126BQ8IXS8 530 aa22.24■■□□□ 1.15
VCY1B-201ENST00000250823 TBC1D5Q92609 795 aa22.24■■□□□ 1.15
VCY1B-201ENST00000250823 CCDC136Q96JN2 1154 aa22.24■■□□□ 1.15
VCY1B-201ENST00000250823 TAAR1Q96RJ0 339 aa22.24■■□□□ 1.15
VCY1B-201ENST00000250823 LZTS2Q9BRK4 669 aa22.24■■□□□ 1.15
VCY1B-201ENST00000250823 GPHNQ9NQX3 736 aaPredicted RBP22.24■■□□□ 1.15
VCY1B-201ENST00000250823 PNMA6FA0A0J9YX94 578 aa22.23■■□□□ 1.15
VCY1B-201ENST00000250823 CCDC69A6NI79 296 aa22.23■■□□□ 1.15
VCY1B-201ENST00000250823 CDC45O75419 566 aa22.23■■□□□ 1.15
VCY1B-201ENST00000250823 CALM1P0DP23 149 aa22.23■■□□□ 1.15
VCY1B-201ENST00000250823 CALM2P0DP24 149 aa22.23■■□□□ 1.15
VCY1B-201ENST00000250823 CALM3P0DP25 149 aa22.23■■□□□ 1.15
VCY1B-201ENST00000250823 SMARCA1P28370 1054 aa22.23■■□□□ 1.15
VCY1B-201ENST00000250823 GNAQP50148 359 aa22.23■■□□□ 1.15
VCY1B-201ENST00000250823 ZNF654Q8IZM8 581 aa22.23■■□□□ 1.15
VCY1B-201ENST00000250823 PIGSQ96S52 555 aa22.23■■□□□ 1.15
VCY1B-201ENST00000250823 LY9Q9HBG7 655 aa22.23■■□□□ 1.15
VCY1B-201ENST00000250823 SENP2Q9HC62 589 aa22.23■■□□□ 1.15
VCY1B-201ENST00000250823 LIFRP42702 1097 aa22.22■■□□□ 1.15
VCY1B-201ENST00000250823 NFXL1Q6ZNB6 911 aa22.22■■□□□ 1.15
VCY1B-201ENST00000250823 COL20A1Q9P218 1284 aa22.22■■□□□ 1.15
VCY1B-201ENST00000250823 MYH6P13533 1939 aa22.21■■□□□ 1.15
VCY1B-201ENST00000250823 SH2B2O14492 632 aaPredicted RBP22.21■■□□□ 1.15
VCY1B-201ENST00000250823 EIF3JO75822 258 aaKnown RBP22.21■■□□□ 1.15
VCY1B-201ENST00000250823 CD4P01730 458 aa22.21■■□□□ 1.15
VCY1B-201ENST00000250823 ITGB8P26012 769 aa22.21■■□□□ 1.15
VCY1B-201ENST00000250823 SHHQ15465 462 aa22.21■■□□□ 1.15
VCY1B-201ENST00000250823 TMEM63BQ5T3F8 832 aa22.21■■□□□ 1.15
VCY1B-201ENST00000250823 MFSD5Q6N075 450 aa22.21■■□□□ 1.15
VCY1B-201ENST00000250823 TMEM199Q8N511 208 aa22.21■■□□□ 1.15
VCY1B-201ENST00000250823 MTG1Q9BT17 334 aaPredicted RBP22.21■■□□□ 1.15
VCY1B-201ENST00000250823 SPZ1Q9BXG8 430 aa22.21■■□□□ 1.15
VCY1B-201ENST00000250823 PXMP2Q9NR77 195 aa22.21■■□□□ 1.15
VCY1B-201ENST00000250823 A6NJR5 290 aa22.2■■□□□ 1.14
VCY1B-201ENST00000250823 GCOM1H8Y6P7 765 aaPredicted RBP22.2■■□□□ 1.14
VCY1B-201ENST00000250823 CYTH3O43739 400 aa22.2■■□□□ 1.14
VCY1B-201ENST00000250823 PPP1R11O60927 126 aaPredicted RBP22.2■■□□□ 1.14
VCY1B-201ENST00000250823 NR3C2P08235 984 aa22.2■■□□□ 1.14
VCY1B-201ENST00000250823 POLR2MP0CAP2 368 aa22.2■■□□□ 1.14
VCY1B-201ENST00000250823 PURAQ00577 322 aaKnown RBP22.2■■□□□ 1.14
VCY1B-201ENST00000250823 PPIGQ13427 754 aaKnown RBP eCLIP22.2■■□□□ 1.14
VCY1B-201ENST00000250823 OPLAHO14841 1288 aa22.19■■□□□ 1.14
VCY1B-201ENST00000250823 GH1P01241 217 aa22.19■■□□□ 1.14
VCY1B-201ENST00000250823 MYL3P08590 195 aa22.19■■□□□ 1.14
VCY1B-201ENST00000250823 SUPT20HL2P0C7V6 817 aa22.19■■□□□ 1.14
VCY1B-201ENST00000250823 EIF2AK2P19525 551 aaKnown RBP22.19■■□□□ 1.14
VCY1B-201ENST00000250823 FAM109BQ6ICB4 259 aaPredicted RBP22.19■■□□□ 1.14
VCY1B-201ENST00000250823 CCDC62Q6P9F0 684 aa22.19■■□□□ 1.14
VCY1B-201ENST00000250823 KCNV1Q6PIU1 500 aa22.19■■□□□ 1.14
VCY1B-201ENST00000250823 SEPT14Q6ZU15 432 aa22.19■■□□□ 1.14
VCY1B-201ENST00000250823 RRP36Q96EU6 259 aaKnown RBP22.19■■□□□ 1.14
VCY1B-201ENST00000250823 SEC63Q9UGP8 760 aaKnown RBP22.19■■□□□ 1.14
VCY1B-201ENST00000250823 LAMA3Q16787 3333 aa22.19■■□□□ 1.14
VCY1B-201ENST00000250823 NEFLP07196 543 aa22.18■■□□□ 1.14
VCY1B-201ENST00000250823 PTGS1P23219 599 aa22.18■■□□□ 1.14
VCY1B-201ENST00000250823 KRT32Q14532 448 aa22.18■■□□□ 1.14
VCY1B-201ENST00000250823 SLC35G1Q2M3R5 365 aa22.18■■□□□ 1.14
VCY1B-201ENST00000250823 C9orf50Q5SZB4 431 aa22.18■■□□□ 1.14
VCY1B-201ENST00000250823 DEFB123Q8N688 67 aa22.18■■□□□ 1.14
VCY1B-201ENST00000250823 PDCD2LQ9BRP1 358 aa22.18■■□□□ 1.14
VCY1B-201ENST00000250823 SLC12A7Q9Y666 1083 aa22.18■■□□□ 1.14
VCY1B-201ENST00000250823 GRIN2DO15399 1336 aa22.17■■□□□ 1.14
VCY1B-201ENST00000250823 SYNE3Q6ZMZ3 975 aa22.17■■□□□ 1.14
VCY1B-201ENST00000250823 RNPC3Q96LT9 517 aaKnown RBP22.17■■□□□ 1.14
VCY1B-201ENST00000250823 NEK1Q96PY6 1258 aa22.17■■□□□ 1.14
VCY1B-201ENST00000250823 MRVI1Q9Y6F6 885 aa22.17■■□□□ 1.14
VCY1B-201ENST00000250823 ARIH2O95376 493 aa22.16■■□□□ 1.14
VCY1B-201ENST00000250823 PSMC6P62333 389 aa22.16■■□□□ 1.14
VCY1B-201ENST00000250823 SMAD3P84022 425 aaKnown RBP22.16■■□□□ 1.14
VCY1B-201ENST00000250823 PTPN11Q06124 597 aaPredicted RBP22.16■■□□□ 1.14
VCY1B-201ENST00000250823 TSGA10IPQ3SY00 556 aa22.16■■□□□ 1.14
VCY1B-201ENST00000250823 SGMS1Q86VZ5 419 aa22.16■■□□□ 1.14
VCY1B-201ENST00000250823 SKAP1Q86WV1 359 aa22.16■■□□□ 1.14
VCY1B-201ENST00000250823 COPS5Q92905 334 aa22.16■■□□□ 1.14
VCY1B-201ENST00000250823 PPP1R12CQ9BZL4 782 aa22.16■■□□□ 1.14
VCY1B-201ENST00000250823 ALDH8A1Q9H2A2 487 aaPredicted RBP22.16■■□□□ 1.14
VCY1B-201ENST00000250823 HIPK3Q9H422 1215 aa22.16■■□□□ 1.14
VCY1B-201ENST00000250823 SZT2Q5T011 3432 aa22.16■■□□□ 1.14
VCY1B-201ENST00000250823 B4GALT4O60513 344 aa22.15■■□□□ 1.14
VCY1B-201ENST00000250823 HMGB1P09429 215 aaKnown RBP22.15■■□□□ 1.14
VCY1B-201ENST00000250823 CCND2P30279 289 aa22.15■■□□□ 1.14
VCY1B-201ENST00000250823 HOXA13P31271 388 aaPredicted RBP22.15■■□□□ 1.14
VCY1B-201ENST00000250823 PGM5Q15124 567 aa22.15■■□□□ 1.14
VCY1B-201ENST00000250823 NFRKBQ6P4R8 1299 aa22.15■■□□□ 1.14
VCY1B-201ENST00000250823 PSRC1Q6PGN9 363 aaPredicted RBP22.15■■□□□ 1.14
VCY1B-201ENST00000250823 CUL5Q93034 780 aa22.15■■□□□ 1.14
VCY1B-201ENST00000250823 EMID1Q96A84 441 aaPredicted RBP22.15■■□□□ 1.14
VCY1B-201ENST00000250823 MYL10Q9BUA6 226 aa22.15■■□□□ 1.14
VCY1B-201ENST00000250823 DDX41Q9UJV9 622 aaKnown RBP22.15■■□□□ 1.14
VCY1B-201ENST00000250823 STAM2O75886 525 aa22.14■■□□□ 1.13
VCY1B-201ENST00000250823 MYCLP12524 364 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms