RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 MAPKAPK5Q8IW41 473 aa19.24■□□□□ 0.67
USB1-201ENST00000219281 GSPT2Q8IYD1 628 aaKnown RBP19.24■□□□□ 0.67
USB1-201ENST00000219281 KIAA0895Q8NCT3 520 aa19.24■□□□□ 0.67
USB1-201ENST00000219281 WDR66Q8TBY9 1149 aa19.24■□□□□ 0.67
USB1-201ENST00000219281 SMCR8Q8TEV9 937 aaPredicted RBP19.24■□□□□ 0.67
USB1-201ENST00000219281 SECISBP2LQ93073 1101 aaKnown RBP19.24■□□□□ 0.67
USB1-201ENST00000219281 CCDC42Q96M95 316 aa19.24■□□□□ 0.67
USB1-201ENST00000219281 ERGIC2Q96RQ1 377 aa19.24■□□□□ 0.67
USB1-201ENST00000219281 LZTS2Q9BRK4 669 aa19.24■□□□□ 0.67
USB1-201ENST00000219281 MMTAG2Q9BU76 263 aaKnown RBP19.24■□□□□ 0.67
USB1-201ENST00000219281 SEMA6BQ9H3T3 888 aa19.24■□□□□ 0.67
USB1-201ENST00000219281 ROBO3Q96MS0 1386 aa19.24■□□□□ 0.67
USB1-201ENST00000219281 ANO9A1A5B4 782 aa19.23■□□□□ 0.67
USB1-201ENST00000219281 NT5C2P49902 561 aa19.23■□□□□ 0.67
USB1-201ENST00000219281 AMPD3Q01432 767 aa19.23■□□□□ 0.67
USB1-201ENST00000219281 C2orf54Q08AI8 447 aa19.23■□□□□ 0.67
USB1-201ENST00000219281 CNNM4Q6P4Q7 775 aa19.23■□□□□ 0.67
USB1-201ENST00000219281 NEK8Q86SG6 692 aa19.23■□□□□ 0.67
USB1-201ENST00000219281 C6orf50Q9HD87 102 aa19.23■□□□□ 0.67
USB1-201ENST00000219281 A0A0U1RQG5 324 aaPredicted RBP19.23■□□□□ 0.67
USB1-201ENST00000219281 BAG3O95817 575 aa19.23■□□□□ 0.67
USB1-201ENST00000219281 AARSP49588 968 aaKnown RBP eCLIP19.23■□□□□ 0.67
USB1-201ENST00000219281 SPA17Q15506 151 aa19.23■□□□□ 0.67
USB1-201ENST00000219281 CCDC96Q2M329 555 aa19.23■□□□□ 0.67
USB1-201ENST00000219281 FIGNQ5HY92 759 aa19.23■□□□□ 0.67
USB1-201ENST00000219281 VAT1LQ9HCJ6 419 aa19.23■□□□□ 0.67
USB1-201ENST00000219281 MAST2Q6P0Q8 1798 aa19.23■□□□□ 0.67
USB1-201ENST00000219281 POLRMTO00411 1230 aaKnown RBP19.22■□□□□ 0.67
USB1-201ENST00000219281 PPP1R2P41236 205 aa19.22■□□□□ 0.67
USB1-201ENST00000219281 CDK17Q00537 523 aa19.22■□□□□ 0.67
USB1-201ENST00000219281 TBCKQ8TEA7 893 aa19.22■□□□□ 0.67
USB1-201ENST00000219281 ZFP91Q96JP5 570 aaPredicted RBP19.22■□□□□ 0.67
USB1-201ENST00000219281 SPZ1Q9BXG8 430 aa19.22■□□□□ 0.67
USB1-201ENST00000219281 IVLP07476 585 aa19.22■□□□□ 0.67
USB1-201ENST00000219281 MYBL2P10244 700 aa19.22■□□□□ 0.67
USB1-201ENST00000219281 FOXR1Q6PIV2 292 aa19.22■□□□□ 0.67
USB1-201ENST00000219281 USP17L2Q6R6M4 530 aa19.22■□□□□ 0.67
USB1-201ENST00000219281 COG1Q8WTW3 980 aa19.22■□□□□ 0.67
USB1-201ENST00000219281 CALML4Q96GE6 196 aa19.22■□□□□ 0.67
USB1-201ENST00000219281 TSGA10Q9BZW7 698 aa19.22■□□□□ 0.67
USB1-201ENST00000219281 CD209Q9NNX6 404 aa19.22■□□□□ 0.67
USB1-201ENST00000219281 BIN2Q9UBW5 565 aaPredicted RBP19.22■□□□□ 0.67
USB1-201ENST00000219281 CCDC88AQ3V6T2 1871 aa19.22■□□□□ 0.67
USB1-201ENST00000219281 RPS6KA5O75582 802 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 GNA11P29992 359 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 TXKP42681 527 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 SOGA3Q5TF21 947 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 CCNI2Q6ZMN8 369 aaPredicted RBP19.21■□□□□ 0.67
USB1-201ENST00000219281 ZNF804AQ7Z570 1209 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 C2CD5Q86YS7 1000 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 RIN2Q8WYP3 895 aaPredicted RBP19.21■□□□□ 0.67
USB1-201ENST00000219281 RRP36Q96EU6 259 aaKnown RBP19.21■□□□□ 0.67
USB1-201ENST00000219281 HINFPQ9BQA5 517 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 TSPYL1Q9H0U9 437 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 MYO1CO00159 1063 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 EPHB6O15197 1021 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 UFL1O94874 794 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 HOXA10P31260 410 aaPredicted RBP19.21■□□□□ 0.67
USB1-201ENST00000219281 VWA3BQ502W6 1294 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 CENPPQ6IPU0 288 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 SV2BQ7L1I2 683 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 GPIHBP1Q8IV16 184 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 GOLGA6L1Q8N7Z2 621 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 AFAP1L1Q8TED9 768 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 RBM17Q96I25 401 aaKnown RBP19.21■□□□□ 0.67
USB1-201ENST00000219281 MLXIPQ9HAP2 919 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 FAM207AQ9NSI2 230 aaPredicted RBP19.21■□□□□ 0.67
USB1-201ENST00000219281 ARHGAP20Q9P2F6 1191 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 PCDHA13Q9Y5I0 950 aa19.21■□□□□ 0.67
USB1-201ENST00000219281 PRPF6O94906 941 aaKnown RBP19.2■□□□□ 0.66
USB1-201ENST00000219281 GSTO1P78417 241 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 SRLQ86TD4 932 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 DRC1Q96MC2 740 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 PIGSQ96S52 555 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 EYA3Q99504 573 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 IFIH1Q9BYX4 1025 aaKnown RBP19.2■□□□□ 0.66
USB1-201ENST00000219281 TMEM260Q9NX78 707 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 POLLQ9UGP5 575 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 SEC63Q9UGP8 760 aaKnown RBP19.2■□□□□ 0.66
USB1-201ENST00000219281 PLAGL2Q9UPG8 496 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 CAPN6Q9Y6Q1 641 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 ZC3H4Q9UPT8 1303 aaKnown RBP19.2■□□□□ 0.66
USB1-201ENST00000219281 KLRG2A4D1S0 409 aaPredicted RBP19.2■□□□□ 0.66
USB1-201ENST00000219281 TRIM66O15016 1216 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 USO1O60763 962 aaKnown RBP19.2■□□□□ 0.66
USB1-201ENST00000219281 TACC1O75410 805 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 BBOX1O75936 387 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 CDK8P49336 464 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 PPP4CP60510 307 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 GRB10Q13322 594 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 COBLL1Q53SF7 1204 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 LRRC31Q6UY01 552 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 TRIM58Q8NG06 486 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 SELENOOQ9BVL4 669 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 NDST4Q9H3R1 872 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 SNX12Q9UMY4 172 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 SIK3Q9Y2K2 1263 aa19.2■□□□□ 0.66
USB1-201ENST00000219281 RRP15Q9Y3B9 282 aaKnown RBP19.2■□□□□ 0.66
USB1-201ENST00000219281 JRKLQ9Y4A0 524 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms