RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 CCDC34Q96HJ3 373 aa22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.23■■□□□ 1.15
TNFRSF1A-201ENST00000162749 FXR2P51116 673 aaKnown RBP eCLIP22.22■■□□□ 1.15
TNFRSF1A-201ENST00000162749 SPATA20Q8TB22 786 aa22.22■■□□□ 1.15
TNFRSF1A-201ENST00000162749 HAS1Q92839 578 aa22.22■■□□□ 1.15
TNFRSF1A-201ENST00000162749 CDCA5Q96FF9 252 aa22.22■■□□□ 1.15
TNFRSF1A-201ENST00000162749 PAGE5Q96GU1 130 aa22.22■■□□□ 1.15
TNFRSF1A-201ENST00000162749 MBOAT7Q96N66 472 aa22.22■■□□□ 1.15
TNFRSF1A-201ENST00000162749 IQCA1LA6NCM1 817 aa22.22■■□□□ 1.15
TNFRSF1A-201ENST00000162749 GCOM1H8Y6P7 765 aaPredicted RBP22.22■■□□□ 1.15
TNFRSF1A-201ENST00000162749 OFD1O75665 1012 aa22.22■■□□□ 1.15
TNFRSF1A-201ENST00000162749 POLR2MP0CAP2 368 aa22.22■■□□□ 1.15
TNFRSF1A-201ENST00000162749 ISM2Q6H9L7 571 aa22.22■■□□□ 1.15
TNFRSF1A-201ENST00000162749 AFMP43652 599 aa22.21■■□□□ 1.15
TNFRSF1A-201ENST00000162749 SARSP49591 514 aaKnown RBP22.21■■□□□ 1.15
TNFRSF1A-201ENST00000162749 EAPPQ56P03 285 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-201ENST00000162749 NAALADL2Q58DX5 795 aa22.21■■□□□ 1.15
TNFRSF1A-201ENST00000162749 FCHSD1Q86WN1 690 aa22.21■■□□□ 1.15
TNFRSF1A-201ENST00000162749 CPXCR1Q8N123 301 aa22.21■■□□□ 1.15
TNFRSF1A-201ENST00000162749 WNK4Q96J92 1243 aa22.21■■□□□ 1.15
TNFRSF1A-201ENST00000162749 TTC12Q9H892 705 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1A-201ENST00000162749 CSADQ9Y600 493 aa22.21■■□□□ 1.15
TNFRSF1A-201ENST00000162749 STAT6P42226 847 aa22.2■■□□□ 1.14
TNFRSF1A-201ENST00000162749 PLCB2Q00722 1185 aa22.2■■□□□ 1.14
TNFRSF1A-201ENST00000162749 MTRQ99707 1265 aa22.2■■□□□ 1.14
TNFRSF1A-201ENST00000162749 NAT10Q9H0A0 1025 aaKnown RBP22.2■■□□□ 1.14
TNFRSF1A-201ENST00000162749 RAVER2Q9HCJ3 691 aaKnown RBP22.2■■□□□ 1.14
TNFRSF1A-201ENST00000162749 KCNMB3Q9NPA1 279 aa22.2■■□□□ 1.14
TNFRSF1A-201ENST00000162749 POTEMA6NI47 508 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 VWA5AO00534 786 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 IREB2P48200 963 aaKnown RBP22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 TMEM266Q2M3C6 531 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 CABP7Q86V35 215 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 RASSF8Q8NHQ8 419 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 CNKSR2Q8WXI2 1034 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 SMARCE1Q969G3 411 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 GJA10Q969M2 543 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 ATG4CQ96DT6 458 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 FAM86B1E9PN63 330 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 FAM86B2P0C5J1 330 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 BMP6P22004 513 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 CASP1P29466 404 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 PDIA5Q14554 519 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 DHX40Q8IX18 779 aaKnown RBP22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 RBM46Q8TBY0 533 aaKnown RBP22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 STAMQ92783 540 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 LENG9Q96B70 501 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 MMTAG2Q9BU76 263 aaKnown RBP22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 LRWD1Q9UFC0 647 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 LOC285556D6RIA3 1793 aa22.19■■□□□ 1.14
TNFRSF1A-201ENST00000162749 NFIBO00712 420 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 FDX1P10109 184 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 CIITAP33076 1130 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 NF2P35240 595 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 DPYDQ12882 1025 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 SH3D19Q5HYK7 790 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 RRAGBQ5VZM2 374 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 LRRC15Q8TF66 581 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 CLEC4DQ8WXI8 215 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 ZNF830Q96NB3 372 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 RAB34Q9BZG1 259 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 TMOD4Q9NZQ9 345 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 MAN1B1Q9UKM7 699 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 CYP3A4P08684 503 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 ALAS1P13196 640 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 PRR16Q569H4 304 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 BPIFA3Q9BQP9 254 aa22.18■■□□□ 1.14
TNFRSF1A-201ENST00000162749 ZBED4O75132 1171 aa22.17■■□□□ 1.14
TNFRSF1A-201ENST00000162749 HSD17B4P51659 736 aa22.17■■□□□ 1.14
TNFRSF1A-201ENST00000162749 Q4G0T1 1027 aa22.17■■□□□ 1.14
TNFRSF1A-201ENST00000162749 MOB2Q70IA6 237 aa22.17■■□□□ 1.14
TNFRSF1A-201ENST00000162749 PNMA8AQ86V59 439 aaPredicted RBP22.17■■□□□ 1.14
TNFRSF1A-201ENST00000162749 PLIN2Q99541 437 aa22.17■■□□□ 1.14
TNFRSF1A-201ENST00000162749 PCDHA12Q9UN75 941 aa22.17■■□□□ 1.14
TNFRSF1A-201ENST00000162749 PLCG1P19174 1290 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 CATSPERGQ6ZRH7 1159 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 ETNPPLQ8TBG4 499 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 HOMER2Q9NSB8 354 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 ADAMTS5Q9UNA0 930 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 MARCH6O60337 910 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 SMC2O95347 1197 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 DSG3P32926 999 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 GHRHRQ02643 423 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 MORC3Q14149 939 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 COG2Q14746 738 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 ANKRD13AQ8IZ07 590 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 AOPEPQ8N6M6 819 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 TRIML1Q8N9V2 468 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 REPS2Q8NFH8 660 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 CLMNQ96JQ2 1002 aa22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 CTDP1Q9Y5B0 961 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF1A-201ENST00000162749 BECN2A8MW95 431 aa22.15■■□□□ 1.14
TNFRSF1A-201ENST00000162749 MUM1L1Q5H9M0 696 aa22.15■■□□□ 1.14
TNFRSF1A-201ENST00000162749 CYP2W1Q8TAV3 490 aa22.15■■□□□ 1.14
TNFRSF1A-201ENST00000162749 UIMC1Q96RL1 719 aa22.15■■□□□ 1.14
TNFRSF1A-201ENST00000162749 ELP3Q9H9T3 547 aa22.15■■□□□ 1.14
TNFRSF1A-201ENST00000162749 GOLGA6L19H0YKK7 550 aa22.15■■□□□ 1.14
TNFRSF1A-201ENST00000162749 SLFN12Q8IYM2 578 aa22.15■■□□□ 1.14
TNFRSF1A-201ENST00000162749 GSDMAQ96QA5 445 aa22.15■■□□□ 1.14
TNFRSF1A-201ENST00000162749 BLZF1Q9H2G9 400 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms