RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 FOSP01100 380 aaPredicted RBP24.96■■□□□ 1.59
HOXC8-201ENST00000040584 KRI1Q8N9T8 703 aaKnown RBP24.96■■□□□ 1.59
HOXC8-201ENST00000040584 CLIC6Q96NY7 704 aa24.96■■□□□ 1.59
HOXC8-201ENST00000040584 FBXO2Q9UK22 296 aaPredicted RBP24.96■■□□□ 1.59
HOXC8-201ENST00000040584 BTBD19C9JJ37 291 aa24.95■■□□□ 1.58
HOXC8-201ENST00000040584 TOMM70O94826 608 aa24.95■■□□□ 1.58
HOXC8-201ENST00000040584 PTPREP23469 700 aa24.95■■□□□ 1.58
HOXC8-201ENST00000040584 ATP2C1P98194 919 aaPredicted RBP24.95■■□□□ 1.58
HOXC8-201ENST00000040584 MCF2L2Q86YR7 1114 aa24.95■■□□□ 1.58
HOXC8-201ENST00000040584 RASAL3Q86YV0 1011 aa24.95■■□□□ 1.58
HOXC8-201ENST00000040584 CCAR1Q8IX12 1150 aaKnown RBP24.95■■□□□ 1.58
HOXC8-201ENST00000040584 MB21D1Q8N884 522 aa24.95■■□□□ 1.58
HOXC8-201ENST00000040584 C4orf32Q8N8J7 132 aa24.95■■□□□ 1.58
HOXC8-201ENST00000040584 HSD17B4P51659 736 aa24.94■■□□□ 1.58
HOXC8-201ENST00000040584 GRIN1Q05586 938 aa24.94■■□□□ 1.58
HOXC8-201ENST00000040584 PAGR1Q9BTK6 254 aa24.94■■□□□ 1.58
HOXC8-201ENST00000040584 GOLPH3LQ9H4A5 285 aa24.94■■□□□ 1.58
HOXC8-201ENST00000040584 SRPRBQ9Y5M8 271 aaKnown RBP24.94■■□□□ 1.58
HOXC8-201ENST00000040584 MYH7BA7E2Y1 1941 aa24.94■■□□□ 1.58
HOXC8-201ENST00000040584 CUTAO60888 179 aa24.94■■□□□ 1.58
HOXC8-201ENST00000040584 TDP2O95551 362 aa24.94■■□□□ 1.58
HOXC8-201ENST00000040584 RGMBQ6NW40 437 aa24.94■■□□□ 1.58
HOXC8-201ENST00000040584 TMEM60Q9H2L4 133 aa24.94■■□□□ 1.58
HOXC8-201ENST00000040584 PDHXO00330 501 aa24.93■■□□□ 1.58
HOXC8-201ENST00000040584 CYP2C8P10632 490 aa24.93■■□□□ 1.58
HOXC8-201ENST00000040584 CMA1P23946 247 aa24.93■■□□□ 1.58
HOXC8-201ENST00000040584 CAMK4Q16566 473 aa24.93■■□□□ 1.58
HOXC8-201ENST00000040584 FSIP1Q8NA03 581 aa24.93■■□□□ 1.58
HOXC8-201ENST00000040584 MRPS27Q92552 414 aaKnown RBP24.93■■□□□ 1.58
HOXC8-201ENST00000040584 TLL2Q9Y6L7 1015 aa24.93■■□□□ 1.58
HOXC8-201ENST00000040584 A0A0G2JMZ2 1700 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 SREBF1P36956 1147 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 ARHGAP4P98171 946 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 HSP90AA2PQ14568 343 aaPredicted RBP24.92■■□□□ 1.58
HOXC8-201ENST00000040584 CRYGNQ8WXF5 182 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 COL20A1Q9P218 1284 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 NR1I2O75469 434 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 CNMDO75829 334 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 RPS6P62753 249 aaKnown RBP24.92■■□□□ 1.58
HOXC8-201ENST00000040584 GHRHRQ02643 423 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 NOLC1Q14978 699 aaKnown RBP eCLIP24.92■■□□□ 1.58
HOXC8-201ENST00000040584 SHC4Q6S5L8 630 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 NSMFQ6X4W1 530 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 PTPN18Q99952 460 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 TXNRD2Q9NNW7 524 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 RBPJLQ9UBG7 517 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 PNMA3Q9UL41 463 aa24.92■■□□□ 1.58
HOXC8-201ENST00000040584 ABT1Q9ULW3 272 aaKnown RBP24.92■■□□□ 1.58
HOXC8-201ENST00000040584 SLC37A4O43826 429 aa24.91■■□□□ 1.58
HOXC8-201ENST00000040584 NEMFO60524 1076 aa24.91■■□□□ 1.58
HOXC8-201ENST00000040584 YY1P25490 414 aa24.91■■□□□ 1.58
HOXC8-201ENST00000040584 USP11P51784 963 aa24.91■■□□□ 1.58
HOXC8-201ENST00000040584 PLCB2Q00722 1185 aa24.91■■□□□ 1.58
HOXC8-201ENST00000040584 ORC2Q13416 577 aaPredicted RBP24.91■■□□□ 1.58
HOXC8-201ENST00000040584 TKFCQ3LXA3 575 aa24.91■■□□□ 1.58
HOXC8-201ENST00000040584 SLC30A10Q6XR72 485 aa24.91■■□□□ 1.58
HOXC8-201ENST00000040584 RNF207Q6ZRF8 634 aa24.91■■□□□ 1.58
HOXC8-201ENST00000040584 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.91■■□□□ 1.58
HOXC8-201ENST00000040584 ANKRD23Q86SG2 305 aa24.91■■□□□ 1.58
HOXC8-201ENST00000040584 ZNF579Q8NAF0 562 aaKnown RBP24.91■■□□□ 1.58
HOXC8-201ENST00000040584 ENGASEQ8NFI3 743 aa24.91■■□□□ 1.58
HOXC8-201ENST00000040584 SYTL5Q8TDW5 730 aaPredicted RBP24.91■■□□□ 1.58
HOXC8-201ENST00000040584 FERMT2Q96AC1 680 aa24.91■■□□□ 1.58
HOXC8-201ENST00000040584 SPATC1LQ9H0A9 340 aa24.91■■□□□ 1.58
HOXC8-201ENST00000040584 A0A1B0GVL5 298 aa24.9■■□□□ 1.58
HOXC8-201ENST00000040584 FAM160A1Q05DH4 1040 aa24.9■■□□□ 1.58
HOXC8-201ENST00000040584 SNW1Q13573 536 aaKnown RBP24.9■■□□□ 1.58
HOXC8-201ENST00000040584 IL17AQ16552 155 aa24.9■■□□□ 1.58
HOXC8-201ENST00000040584 SPECC1Q5M775 1068 aa24.9■■□□□ 1.58
HOXC8-201ENST00000040584 PPP4R3AQ6IN85 833 aa24.9■■□□□ 1.58
HOXC8-201ENST00000040584 CCDC73Q6ZRK6 1079 aa24.9■■□□□ 1.58
HOXC8-201ENST00000040584 POTEDQ86YR6 584 aa24.9■■□□□ 1.58
HOXC8-201ENST00000040584 SPTLC3Q9NUV7 552 aa24.9■■□□□ 1.58
HOXC8-201ENST00000040584 SLC45A1Q9Y2W3 748 aa24.9■■□□□ 1.58
HOXC8-201ENST00000040584 TMEM88BA6NKF7 163 aa24.89■■□□□ 1.58
HOXC8-201ENST00000040584 UBXN2AP68543 259 aa24.89■■□□□ 1.58
HOXC8-201ENST00000040584 ANO6Q4KMQ2 910 aa24.89■■□□□ 1.58
HOXC8-201ENST00000040584 RESP18Q5W5W9 173 aa24.89■■□□□ 1.58
HOXC8-201ENST00000040584 ARL6IP4Q66PJ3 421 aaKnown RBP24.89■■□□□ 1.58
HOXC8-201ENST00000040584 RIOX2Q8IUF8 465 aa24.89■■□□□ 1.58
HOXC8-201ENST00000040584 CSRNP2Q9H175 543 aa24.89■■□□□ 1.58
HOXC8-201ENST00000040584 ACAD9Q9H845 621 aa24.89■■□□□ 1.58
HOXC8-201ENST00000040584 MAP3K20Q9NYL2 800 aaKnown RBP24.89■■□□□ 1.58
HOXC8-201ENST00000040584 FAM237AA0A1B0GTK4 181 aa24.89■■□□□ 1.57
HOXC8-201ENST00000040584 VWA3AA6NCI4 1184 aa24.89■■□□□ 1.57
HOXC8-201ENST00000040584 BAATQ14032 418 aaPredicted RBP24.89■■□□□ 1.57
HOXC8-201ENST00000040584 ZNF784Q8NCA9 323 aaPredicted RBP24.89■■□□□ 1.57
HOXC8-201ENST00000040584 PRIMPOLQ96LW4 560 aa24.89■■□□□ 1.57
HOXC8-201ENST00000040584 CBX8Q9HC52 389 aa24.89■■□□□ 1.57
HOXC8-201ENST00000040584 DDX25Q9UHL0 483 aaKnown RBP24.89■■□□□ 1.57
HOXC8-201ENST00000040584 RABGAP1Q9Y3P9 1069 aa24.89■■□□□ 1.57
HOXC8-201ENST00000040584 LAD1O00515 517 aa24.88■■□□□ 1.57
HOXC8-201ENST00000040584 DYNC1I1O14576 645 aa24.88■■□□□ 1.57
HOXC8-201ENST00000040584 NDUFA8P51970 172 aa24.88■■□□□ 1.57
HOXC8-201ENST00000040584 Q3C1V9 767 aa24.88■■□□□ 1.57
HOXC8-201ENST00000040584 CKAP2LQ8IYA6 745 aa24.88■■□□□ 1.57
HOXC8-201ENST00000040584 FMR1NBQ8N0W7 255 aaPredicted RBP24.88■■□□□ 1.57
HOXC8-201ENST00000040584 SAMD3Q8N6K7 520 aa24.88■■□□□ 1.57
HOXC8-201ENST00000040584 SMCR8Q8TEV9 937 aaPredicted RBP24.88■■□□□ 1.57
HOXC8-201ENST00000040584 MOV10L1Q9BXT6 1211 aaKnown RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms