RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 BBXQ8WY36 941 aaPredicted RBP6.96□□□□□ -1.3
UBE4A-203ENST00000545354 DIEXFQ68CQ4 756 aaKnown RBP6.95□□□□□ -1.3
UBE4A-203ENST00000545354 HAX1O00165 279 aa6.95□□□□□ -1.3
UBE4A-203ENST00000545354 ZNF592Q92610 1267 aa6.95□□□□□ -1.3
UBE4A-203ENST00000545354 CC2D2BQ6DHV5 1058 aa6.94□□□□□ -1.3
UBE4A-203ENST00000545354 FARP1Q9Y4F1 1045 aaPredicted RBP6.94□□□□□ -1.3
UBE4A-203ENST00000545354 SUPT16HQ9Y5B9 1047 aaKnown RBP6.94□□□□□ -1.3
UBE4A-203ENST00000545354 AXDND1Q5T1B0 1012 aaPredicted RBP6.94□□□□□ -1.3
UBE4A-203ENST00000545354 PPM1GO15355 546 aaPredicted RBP6.93□□□□□ -1.3
UBE4A-203ENST00000545354 CALD1Q05682 793 aaKnown RBP6.93□□□□□ -1.3
UBE4A-203ENST00000545354 HSP90AA2PQ14568 343 aaPredicted RBP6.93□□□□□ -1.3
UBE4A-203ENST00000545354 RBM19Q9Y4C8 960 aaKnown RBP6.93□□□□□ -1.3
UBE4A-203ENST00000545354 ANP32AP39687 249 aaKnown RBP6.92□□□□□ -1.3
UBE4A-203ENST00000545354 CNPY4Q8N129 248 aa6.92□□□□□ -1.3
UBE4A-203ENST00000545354 CENPJQ9HC77 1338 aaPredicted RBP6.92□□□□□ -1.3
UBE4A-203ENST00000545354 C19orf67A6NJJ6 358 aa6.91□□□□□ -1.3
UBE4A-203ENST00000545354 SECISBP2LQ93073 1101 aaKnown RBP6.91□□□□□ -1.3
UBE4A-203ENST00000545354 ZNF622Q969S3 477 aaKnown RBP eCLIP6.91□□□□□ -1.37e-8■■■□□ 16.9
UBE4A-203ENST00000545354 PHF14O94880 888 aa6.91□□□□□ -1.3
UBE4A-203ENST00000545354 EVX2Q03828 476 aa6.9□□□□□ -1.3
UBE4A-203ENST00000545354 TRIM44Q96DX7 344 aaPredicted RBP6.9□□□□□ -1.3
UBE4A-203ENST00000545354 MNX1P50219 401 aaPredicted RBP6.89□□□□□ -1.31
UBE4A-203ENST00000545354 CHMP4BQ9H444 224 aaKnown RBP6.89□□□□□ -1.31
UBE4A-203ENST00000545354 NACADO15069 1562 aa6.88□□□□□ -1.31
UBE4A-203ENST00000545354 IRX6P78412 446 aaPredicted RBP6.88□□□□□ -1.31
UBE4A-203ENST00000545354 DNAJC2Q99543 621 aaKnown RBP6.88□□□□□ -1.31
UBE4A-203ENST00000545354 USP35Q9P2H5 1018 aa6.88□□□□□ -1.31
UBE4A-203ENST00000545354 BICRAQ9NZM4 1560 aa6.87□□□□□ -1.31
UBE4A-203ENST00000545354 WWC1Q8IX03 1113 aa6.87□□□□□ -1.31
UBE4A-203ENST00000545354 MIER1Q8N108 512 aa6.87□□□□□ -1.31
UBE4A-203ENST00000545354 CECR2Q9BXF3 1484 aa6.87□□□□□ -1.31
UBE4A-203ENST00000545354 FAM193AP78312 1265 aa6.86□□□□□ -1.31
UBE4A-203ENST00000545354 SP7Q8TDD2 431 aaPredicted RBP6.86□□□□□ -1.31
UBE4A-203ENST00000545354 BRPF3Q9ULD4 1205 aa6.86□□□□□ -1.31
UBE4A-203ENST00000545354 FAM43AQ8N2R8 423 aa6.86□□□□□ -1.31
UBE4A-203ENST00000545354 UNC13AQ9UPW8 1703 aa6.86□□□□□ -1.31
UBE4A-203ENST00000545354 MAFGO15525 162 aa6.85□□□□□ -1.31
UBE4A-203ENST00000545354 GTF2E1P29083 439 aaPredicted RBP6.85□□□□□ -1.31
UBE4A-203ENST00000545354 HSP90AA1P07900 732 aaKnown RBP6.84□□□□□ -1.31
UBE4A-203ENST00000545354 IL27Q8NEV9 243 aa6.84□□□□□ -1.31
UBE4A-203ENST00000545354 STAC3Q96MF2 364 aa6.84□□□□□ -1.31
UBE4A-203ENST00000545354 CD44P16070 742 aaKnown RBP6.83□□□□□ -1.32
UBE4A-203ENST00000545354 ANAPC15P60006 121 aa6.83□□□□□ -1.32
UBE4A-203ENST00000545354 CFAP44Q96MT7 982 aa6.83□□□□□ -1.32
UBE4A-203ENST00000545354 LAS1LQ9Y4W2 734 aaKnown RBP6.83□□□□□ -1.32
UBE4A-203ENST00000545354 MMP14P50281 582 aa6.82□□□□□ -1.32
UBE4A-203ENST00000545354 CERS3Q8IU89 383 aa6.82□□□□□ -1.32
UBE4A-203ENST00000545354 PLCD3Q8N3E9 789 aa6.82□□□□□ -1.32
UBE4A-203ENST00000545354 GPATCH11Q8N954 259 aa6.82□□□□□ -1.32
UBE4A-203ENST00000545354 CEP120Q8N960 986 aa6.82□□□□□ -1.32
UBE4A-203ENST00000545354 PRDM10Q9NQV6 1147 aa6.82□□□□□ -1.32
UBE4A-203ENST00000545354 CC2D2AQ9P2K1 1620 aa6.82□□□□□ -1.32
UBE4A-203ENST00000545354 TAF3Q5VWG9 929 aa6.81□□□□□ -1.32
UBE4A-203ENST00000545354 KDM2AQ9Y2K7 1162 aa6.81□□□□□ -1.32
UBE4A-203ENST00000545354 NBR1Q14596 966 aa6.8□□□□□ -1.32
UBE4A-203ENST00000545354 ZNF316A6NFI3 1004 aaPredicted RBP6.79□□□□□ -1.32
UBE4A-203ENST00000545354 PATL2C9JE40 543 aaKnown RBP6.79□□□□□ -1.32
UBE4A-203ENST00000545354 IRX3P78415 501 aaPredicted RBP6.79□□□□□ -1.32
UBE4A-203ENST00000545354 PDCL3Q9H2J4 239 aa6.79□□□□□ -1.32
UBE4A-203ENST00000545354 PRDM4Q9UKN5 801 aa6.79□□□□□ -1.32
UBE4A-203ENST00000545354 WASHC2CQ9Y4E1 1318 aa6.78□□□□□ -1.32
UBE4A-203ENST00000545354 APPP05067 770 aa6.78□□□□□ -1.32
UBE4A-203ENST00000545354 TNNT2P45379 298 aaPredicted RBP6.78□□□□□ -1.32
UBE4A-203ENST00000545354 VASPP50552 380 aaPredicted RBP6.78□□□□□ -1.32
UBE4A-203ENST00000545354 RGS22Q8NE09 1264 aa6.78□□□□□ -1.32
UBE4A-203ENST00000545354 MAP7D2Q96T17 732 aa6.77□□□□□ -1.33
UBE4A-203ENST00000545354 ZBTB47Q9UFB7 747 aaPredicted RBP6.77□□□□□ -1.33
UBE4A-203ENST00000545354 NOP58Q9Y2X3 529 aaKnown RBP6.77□□□□□ -1.33
UBE4A-203ENST00000545354 ZRANB1Q9UGI0 708 aa6.76□□□□□ -1.33
UBE4A-203ENST00000545354 OS9Q13438 667 aaPredicted RBP6.76□□□□□ -1.33
UBE4A-203ENST00000545354 CWC22Q9HCG8 908 aaKnown RBP6.76□□□□□ -1.33
UBE4A-203ENST00000545354 GABBR2O75899 941 aa6.75□□□□□ -1.33
UBE4A-203ENST00000545354 ZNF579Q8NAF0 562 aaKnown RBP6.75□□□□□ -1.33
UBE4A-203ENST00000545354 PRDM16Q9HAZ2 1276 aa6.75□□□□□ -1.33
UBE4A-203ENST00000545354 PAK3O75914 559 aaPredicted RBP6.74□□□□□ -1.33
UBE4A-203ENST00000545354 HSP90AB4PQ58FF6 505 aa6.74□□□□□ -1.33
UBE4A-203ENST00000545354 TMED8Q6PL24 325 aaPredicted RBP6.74□□□□□ -1.33
UBE4A-203ENST00000545354 TRIM41Q8WV44 630 aa6.74□□□□□ -1.33
UBE4A-203ENST00000545354 HDAC5Q9UQL6 1122 aa6.74□□□□□ -1.33
UBE4A-203ENST00000545354 NBPF20Q3BBV1 942 aa6.74□□□□□ -1.33
UBE4A-203ENST00000545354 ZNF526Q8TF50 670 aaPredicted RBP6.74□□□□□ -1.33
UBE4A-203ENST00000545354 CLCN6P51797 869 aa6.73□□□□□ -1.33
UBE4A-203ENST00000545354 CASC1Q6TDU7 716 aa6.73□□□□□ -1.33
UBE4A-203ENST00000545354 NUBP1P53384 320 aa6.73□□□□□ -1.33
UBE4A-203ENST00000545354 CC2D1BQ5T0F9 858 aaKnown RBP6.73□□□□□ -1.33
UBE4A-203ENST00000545354 UTP14CQ5TAP6 766 aaKnown RBP6.73□□□□□ -1.33
UBE4A-203ENST00000545354 SMAP1Q8IYB5 467 aaPredicted RBP6.73□□□□□ -1.33
UBE4A-203ENST00000545354 RASEFQ8IZ41 740 aa6.72□□□□□ -1.33
UBE4A-203ENST00000545354 EIF4G1Q04637 1599 aaKnown RBP6.72□□□□□ -1.33
UBE4A-203ENST00000545354 WASHC2AQ641Q2 1341 aa6.71□□□□□ -1.33
UBE4A-203ENST00000545354 TTC36A6NLP5 189 aa6.71□□□□□ -1.33
UBE4A-203ENST00000545354 CCDC27Q2M243 656 aa6.71□□□□□ -1.33
UBE4A-203ENST00000545354 KCNG1Q9UIX4 513 aa6.71□□□□□ -1.33
UBE4A-203ENST00000545354 FAM43BQ6ZT52 329 aaPredicted RBP6.71□□□□□ -1.34
UBE4A-203ENST00000545354 NBPF11Q86T75 865 aa6.71□□□□□ -1.34
UBE4A-203ENST00000545354 TSPYL2Q9H2G4 693 aaPredicted RBP6.71□□□□□ -1.34
UBE4A-203ENST00000545354 PLEKHD1A6NEE1 506 aa6.7□□□□□ -1.34
UBE4A-203ENST00000545354 NBPF1Q3BBV0 1214 aa6.7□□□□□ -1.34
UBE4A-203ENST00000545354 MTERF4Q7Z6M4 381 aaKnown RBP6.7□□□□□ -1.34
UBE4A-203ENST00000545354 GOLGA6L3A6NEY3 463 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms