RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 DIEXFQ68CQ4 756 aaKnown RBP9.05□□□□□ -0.96
VRK2-206ENST00000435505 A6NJR5 290 aa9.04□□□□□ -0.96
VRK2-206ENST00000435505 PUS7Q96PZ0 661 aaKnown RBP9.04□□□□□ -0.96
VRK2-206ENST00000435505 SGIP1Q9BQI5 828 aa9.03□□□□□ -0.96
VRK2-206ENST00000435505 OSCARQ8IYS5 282 aa9.02□□□□□ -0.97
VRK2-206ENST00000435505 MLLT3P42568 568 aaPredicted RBP9.01□□□□□ -0.97
VRK2-206ENST00000435505 GPIHBP1Q8IV16 184 aa9.01□□□□□ -0.97
VRK2-206ENST00000435505 ABCB7O75027 752 aa9□□□□□ -0.97
VRK2-206ENST00000435505 PPP1R37O75864 691 aa9□□□□□ -0.97
VRK2-206ENST00000435505 USP35Q9P2H5 1018 aa9□□□□□ -0.97
VRK2-206ENST00000435505 POM121Q96HA1 1249 aa9□□□□□ -0.97
VRK2-206ENST00000435505 YTHDC1Q96MU7 727 aaKnown RBP8.99□□□□□ -0.97
VRK2-206ENST00000435505 E9PSI1 815 aa8.99□□□□□ -0.97
VRK2-206ENST00000435505 HMGB1P09429 215 aaKnown RBP8.99□□□□□ -0.97
VRK2-206ENST00000435505 PYGBP11216 843 aa8.97□□□□□ -0.97
VRK2-206ENST00000435505 SMYD5Q6GMV2 418 aa8.96□□□□□ -0.97
VRK2-206ENST00000435505 FBXW7Q969H0 707 aa8.96□□□□□ -0.97
VRK2-206ENST00000435505 MCM6Q14566 821 aa8.95□□□□□ -0.98
VRK2-206ENST00000435505 MFRPQ9BY79 579 aa8.95□□□□□ -0.98
VRK2-206ENST00000435505 FNBP4Q8N3X1 1017 aaPredicted RBP8.94□□□□□ -0.98
VRK2-206ENST00000435505 PROSER2Q86WR7 435 aaPredicted RBP8.93□□□□□ -0.98
VRK2-206ENST00000435505 CCDC97Q96F63 343 aaPredicted RBP8.93□□□□□ -0.98
VRK2-206ENST00000435505 NCKAP5LQ9HCH0 1330 aa8.92□□□□□ -0.98
VRK2-206ENST00000435505 CAPN15O75808 1086 aa8.92□□□□□ -0.98
VRK2-206ENST00000435505 CHRM1P11229 460 aaPredicted RBP8.91□□□□□ -0.98
VRK2-206ENST00000435505 SPDYE2BA6NHP3 402 aa8.91□□□□□ -0.98
VRK2-206ENST00000435505 SPDYE6P0CI01 402 aa8.91□□□□□ -0.98
VRK2-206ENST00000435505 SPDYE2Q495Y8 402 aa8.91□□□□□ -0.98
VRK2-206ENST00000435505 RASEFQ8IZ41 740 aa8.91□□□□□ -0.98
VRK2-206ENST00000435505 ZBTB12Q9Y330 459 aaPredicted RBP8.91□□□□□ -0.98
VRK2-206ENST00000435505 PARP9Q8IXQ6 854 aa8.9□□□□□ -0.98
VRK2-206ENST00000435505 DHX37Q8IY37 1157 aaKnown RBP8.9□□□□□ -0.98
VRK2-206ENST00000435505 FAM212AQ96EL1 285 aa8.9□□□□□ -0.98
VRK2-206ENST00000435505 DDRGK1Q96HY6 314 aa8.9□□□□□ -0.98
VRK2-206ENST00000435505 SERPINA10Q9UK55 444 aa8.9□□□□□ -0.98
VRK2-206ENST00000435505 FAM177A1Q8N128 213 aaPredicted RBP8.89□□□□□ -0.99
VRK2-206ENST00000435505 SUPT16HQ9Y5B9 1047 aaKnown RBP8.87□□□□□ -0.99
VRK2-206ENST00000435505 GPR37O15354 613 aa8.86□□□□□ -0.99
VRK2-206ENST00000435505 PLSCR2Q9NRY7 297 aa8.86□□□□□ -0.99
VRK2-206ENST00000435505 LARP6Q9BRS8 491 aaKnown RBP8.85□□□□□ -0.99
VRK2-206ENST00000435505 CARNS1A5YM72 827 aa8.84□□□□□ -0.99
VRK2-206ENST00000435505 CCER1Q8TC90 406 aaPredicted RBP8.84□□□□□ -0.99
VRK2-206ENST00000435505 UNCXA6NJT0 531 aa8.83□□□□□ -1
VRK2-206ENST00000435505 CCDC102AQ96A19 550 aa8.83□□□□□ -1
VRK2-206ENST00000435505 ANO8Q9HCE9 1232 aaPredicted RBP8.83□□□□□ -1
VRK2-206ENST00000435505 ARIH1Q9Y4X5 557 aaPredicted RBP8.81□□□□□ -1
VRK2-206ENST00000435505 MNX1P50219 401 aaPredicted RBP8.8□□□□□ -1
VRK2-206ENST00000435505 GOPCQ9HD26 462 aa8.79□□□□□ -1
VRK2-206ENST00000435505 CLSPNQ9HAW4 1339 aa8.78□□□□□ -1
VRK2-206ENST00000435505 MS4A1P11836 297 aa8.78□□□□□ -1
VRK2-206ENST00000435505 AMHR2Q16671 573 aa8.76□□□□□ -1.01
VRK2-206ENST00000435505 RSPH4AQ5TD94 716 aa8.76□□□□□ -1.01
VRK2-206ENST00000435505 FBXO22Q8NEZ5 403 aa8.75□□□□□ -1.01
VRK2-206ENST00000435505 PCMTD1Q96MG8 357 aaPredicted RBP8.75□□□□□ -1.01
VRK2-206ENST00000435505 COG6Q9Y2V7 657 aa8.75□□□□□ -1.01
VRK2-206ENST00000435505 FECHP22830 423 aa8.74□□□□□ -1.01
VRK2-206ENST00000435505 MFSD10Q14728 455 aa8.74□□□□□ -1.01
VRK2-206ENST00000435505 POLR3GLQ9BT43 218 aa8.74□□□□□ -1.01
VRK2-206ENST00000435505 REPIN1Q9BWE0 567 aaKnown RBP8.74□□□□□ -1.01
VRK2-206ENST00000435505 IRF6O14896 467 aa8.73□□□□□ -1.01
VRK2-206ENST00000435505 CAMK2BQ13554 666 aa8.73□□□□□ -1.01
VRK2-206ENST00000435505 PCDHB8Q9UN66 801 aa8.73□□□□□ -1.01
VRK2-206ENST00000435505 PCDHB13Q9Y5F0 798 aa8.73□□□□□ -1.01
VRK2-206ENST00000435505 TTLL12Q14166 644 aaPredicted RBP8.72□□□□□ -1.01
VRK2-206ENST00000435505 DDX27Q96GQ7 796 aaKnown RBP8.72□□□□□ -1.01
VRK2-206ENST00000435505 CCDC27Q2M243 656 aa8.72□□□□□ -1.01
VRK2-206ENST00000435505 IGSF5Q9NSI5 407 aa8.72□□□□□ -1.01
VRK2-206ENST00000435505 ZNF330Q9Y3S2 320 aaPredicted RBP8.72□□□□□ -1.01
VRK2-206ENST00000435505 MINK1Q8N4C8 1332 aaPredicted RBP8.71□□□□□ -1.01
VRK2-206ENST00000435505 PHF8Q9UPP1 1060 aa8.71□□□□□ -1.01
VRK2-206ENST00000435505 AMOTL2Q9Y2J4 779 aa8.71□□□□□ -1.01
VRK2-206ENST00000435505 OXER1Q8TDS5 423 aa8.71□□□□□ -1.02
VRK2-206ENST00000435505 PPM1GO15355 546 aaPredicted RBP8.7□□□□□ -1.02
VRK2-206ENST00000435505 PROCA1Q8NCQ7 364 aaPredicted RBP8.7□□□□□ -1.02
VRK2-206ENST00000435505 CRISPLD2Q9H0B8 497 aa8.7□□□□□ -1.02
VRK2-206ENST00000435505 MAP2K5Q13163 448 aa8.7□□□□□ -1.02
VRK2-206ENST00000435505 MYT1LQ9UL68 1186 aa8.7□□□□□ -1.02
VRK2-206ENST00000435505 GIGYF2Q6Y7W6 1299 aaKnown RBP8.69□□□□□ -1.02
VRK2-206ENST00000435505 CREBZFQ9NS37 354 aa8.69□□□□□ -1.02
VRK2-206ENST00000435505 SALL2Q9Y467 1007 aaPredicted RBP8.69□□□□□ -1.02
VRK2-206ENST00000435505 IVNS1ABPQ9Y6Y0 642 aa8.69□□□□□ -1.02
VRK2-206ENST00000435505 SNRKQ9NRH2 765 aa8.68□□□□□ -1.02
VRK2-206ENST00000435505 EFCAB3Q8N7B9 438 aa8.67□□□□□ -1.02
VRK2-206ENST00000435505 UBE2Q2Q8WVN8 375 aa8.67□□□□□ -1.02
VRK2-206ENST00000435505 CCDC136Q96JN2 1154 aa8.67□□□□□ -1.02
VRK2-206ENST00000435505 DPYSL4O14531 572 aa8.66□□□□□ -1.02
VRK2-206ENST00000435505 PDE4AP27815 886 aa8.66□□□□□ -1.02
VRK2-206ENST00000435505 PDAP1Q13442 181 aaKnown RBP8.66□□□□□ -1.02
VRK2-206ENST00000435505 CWC22Q9HCG8 908 aaKnown RBP8.66□□□□□ -1.02
VRK2-206ENST00000435505 BRD1O95696 1058 aa8.66□□□□□ -1.02
VRK2-206ENST00000435505 RBM19Q9Y4C8 960 aaKnown RBP8.66□□□□□ -1.02
VRK2-206ENST00000435505 POM121CA8CG34 1229 aa8.65□□□□□ -1.02
VRK2-206ENST00000435505 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.65□□□□□ -1.02
VRK2-206ENST00000435505 PPP1R15AO75807 674 aaPredicted RBP8.65□□□□□ -1.02
VRK2-206ENST00000435505 KCNA1Q09470 495 aa8.65□□□□□ -1.02
VRK2-206ENST00000435505 CCDC125Q86Z20 511 aa8.65□□□□□ -1.02
VRK2-206ENST00000435505 KIAA1522Q9P206 1035 aaPredicted RBP8.65□□□□□ -1.02
VRK2-206ENST00000435505 FBXO31Q5XUX0 539 aaPredicted RBP8.64□□□□□ -1.03
VRK2-206ENST00000435505 SH3D19Q5HYK7 790 aa8.63□□□□□ -1.03
VRK2-206ENST00000435505 BRD2P25440 801 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms