RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 MEIS2O14770 477 aa12.17□□□□□ -0.46
TARDBP-230ENST00000639083 RPN1P04843 607 aaKnown RBP12.17□□□□□ -0.46
TARDBP-230ENST00000639083 TAL1P17542 331 aaPredicted RBP12.17□□□□□ -0.46
TARDBP-230ENST00000639083 PLCG1P19174 1290 aa12.17□□□□□ -0.46
TARDBP-230ENST00000639083 PRELPP51888 382 aa12.17□□□□□ -0.46
TARDBP-230ENST00000639083 STX17P56962 302 aa12.17□□□□□ -0.46
TARDBP-230ENST00000639083 ZNF280AP59817 542 aaPredicted RBP12.17□□□□□ -0.46
TARDBP-230ENST00000639083 ZYXQ15942 572 aaKnown RBP12.17□□□□□ -0.46
TARDBP-230ENST00000639083 MMTAG2Q9BU76 263 aaKnown RBP12.17□□□□□ -0.46
TARDBP-230ENST00000639083 GLT8D2Q9H1C3 349 aa12.17□□□□□ -0.46
TARDBP-230ENST00000639083 SAMSN1Q9NSI8 373 aaKnown RBP12.17□□□□□ -0.46
TARDBP-230ENST00000639083 KBTBD4Q9NVX7 518 aa12.17□□□□□ -0.46
TARDBP-230ENST00000639083 PRR12Q9ULL5 1215 aa12.17□□□□□ -0.46
TARDBP-230ENST00000639083 CDK11BP21127 795 aaKnown RBP12.16□□□□□ -0.46
TARDBP-230ENST00000639083 PTGER2P43116 358 aa12.16□□□□□ -0.46
TARDBP-230ENST00000639083 STAT2P52630 851 aa12.16□□□□□ -0.46
TARDBP-230ENST00000639083 FAM83BQ5T0W9 1011 aa12.16□□□□□ -0.46
TARDBP-230ENST00000639083 SAMD7Q7Z3H4 446 aa12.16□□□□□ -0.46
TARDBP-230ENST00000639083 TMC6Q7Z403 805 aa12.16□□□□□ -0.46
TARDBP-230ENST00000639083 CCDC84Q86UT8 332 aaPredicted RBP12.16□□□□□ -0.46
TARDBP-230ENST00000639083 GJA10Q969M2 543 aa12.16□□□□□ -0.46
TARDBP-230ENST00000639083 GOPCQ9HD26 462 aa12.16□□□□□ -0.46
TARDBP-230ENST00000639083 LRWD1Q9UFC0 647 aa12.16□□□□□ -0.46
TARDBP-230ENST00000639083 DDX25Q9UHL0 483 aaKnown RBP12.16□□□□□ -0.46
TARDBP-230ENST00000639083 GJA3Q9Y6H8 435 aa12.16□□□□□ -0.46
TARDBP-230ENST00000639083 ZNF18P17022 549 aa12.16□□□□□ -0.46
TARDBP-230ENST00000639083 GMPSP49915 693 aaPredicted RBP12.16□□□□□ -0.46
TARDBP-230ENST00000639083 MAP3K10Q02779 954 aa12.16□□□□□ -0.46
TARDBP-230ENST00000639083 CT47A1Q5JQC4 288 aaPredicted RBP12.16□□□□□ -0.46
TARDBP-230ENST00000639083 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
TARDBP-230ENST00000639083 P2RX7Q99572 595 aaKnown RBP12.16□□□□□ -0.46
TARDBP-230ENST00000639083 GLIS2Q9BZE0 524 aaPredicted RBP12.16□□□□□ -0.46
TARDBP-230ENST00000639083 FER1L6Q2WGJ9 1857 aa12.15□□□□□ -0.46
TARDBP-230ENST00000639083 POTEMA6NI47 508 aa12.15□□□□□ -0.46
TARDBP-230ENST00000639083 COBLO75128 1261 aa12.15□□□□□ -0.46
TARDBP-230ENST00000639083 RPS12P25398 132 aaKnown RBP12.15□□□□□ -0.46
TARDBP-230ENST00000639083 FXR2P51116 673 aaKnown RBP eCLIP12.15□□□□□ -0.462e-7■■□□□ 11.5
TARDBP-230ENST00000639083 TBC1D10BQ4KMP7 808 aaPredicted RBP12.15□□□□□ -0.46
TARDBP-230ENST00000639083 NLGN2Q8NFZ4 835 aa12.15□□□□□ -0.46
TARDBP-230ENST00000639083 HAS1Q92839 578 aa12.15□□□□□ -0.46
TARDBP-230ENST00000639083 UIMC1Q96RL1 719 aa12.15□□□□□ -0.46
TARDBP-230ENST00000639083 IMPACTQ9P2X3 320 aa12.15□□□□□ -0.46
TARDBP-230ENST00000639083 CNOT7Q9UIV1 285 aaKnown RBP12.15□□□□□ -0.46
TARDBP-230ENST00000639083 ASTN2O75129 1339 aaPredicted RBP12.15□□□□□ -0.46
TARDBP-230ENST00000639083 CBFA2T2O43439 604 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 PDIA5Q14554 519 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 PTPN21Q16825 1174 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 TMEM266Q2M3C6 531 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 ZNF658Q5TYW1 1059 aaPredicted RBP12.14□□□□□ -0.47
TARDBP-230ENST00000639083 SPATA1Q5VX52 437 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 TEPSINQ96N21 525 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 ANO3Q9BYT9 981 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 CUEDC2Q9H467 287 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 VCPKMTQ9H867 229 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 SPTLC3Q9NUV7 552 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 RMND1Q9NWS8 449 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 MAPK8IP1Q9UQF2 711 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 PHF20L1A8MW92 1017 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 FZD9O00144 591 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 OPLAHO14841 1288 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 MARCH6O60337 910 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 ASNSP08243 561 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 GCFC2P16383 781 aaKnown RBP12.14□□□□□ -0.47
TARDBP-230ENST00000639083 USP11P51784 963 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 DHX8Q14562 1220 aaKnown RBP12.14□□□□□ -0.47
TARDBP-230ENST00000639083 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.14□□□□□ -0.47
TARDBP-230ENST00000639083 CALML4Q96GE6 196 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 INTS13Q9NVM9 706 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 GDAQ9Y2T3 454 aa12.14□□□□□ -0.47
TARDBP-230ENST00000639083 LTBP3Q9NS15 1303 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 SYNRGQ9UMZ2 1314 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 KLRC4O43908 158 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 MYL1P05976 194 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 HOXA13P31271 388 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-230ENST00000639083 MMP14P50281 582 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 GSDMDP57764 484 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 GRB10Q13322 594 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 AP3B2Q13367 1082 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 TNFAIP1Q13829 316 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 KMT5BQ4FZB7 885 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
TARDBP-230ENST00000639083 KIFC2Q96AC6 838 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 NUDT12Q9BQG2 462 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 RAB34Q9BZG1 259 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 PCDHA12Q9UN75 941 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 CTNND2Q9UQB3 1225 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 BRCA1P38398 1863 aaKnown RBP12.13□□□□□ -0.47
TARDBP-230ENST00000639083 SKILP12757 684 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 PRCPP42785 496 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 CHURC1Q8WUH1 139 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 TRIM9Q9C026 710 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 MAGEF1Q9HAY2 307 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 HACL1Q9UJ83 578 aa12.13□□□□□ -0.47
TARDBP-230ENST00000639083 SPDYE3A6NKU9 549 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 ARHGAP4P98171 946 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 KCNB1Q14721 858 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 DNTTIP2Q5QJE6 756 aaKnown RBP12.12□□□□□ -0.47
TARDBP-230ENST00000639083 KRT79Q5XKE5 535 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 ARMCX5Q6P1M9 558 aa12.12□□□□□ -0.47
TARDBP-230ENST00000639083 CCDC174Q6PII3 467 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms