RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 DIXDC1Q155Q3 683 aa18.33■□□□□ 0.52
SCARB2-210ENST00000638567 USP17L1Q7RTZ2 530 aa18.33■□□□□ 0.52
SCARB2-210ENST00000638567 MB21D1Q8N884 522 aa18.33■□□□□ 0.52
SCARB2-210ENST00000638567 RAB17Q9H0T7 212 aa18.33■□□□□ 0.52
SCARB2-210ENST00000638567 ADGRG1Q9Y653 693 aa18.33■□□□□ 0.52
SCARB2-210ENST00000638567 GUCY1A2P33402 732 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 MTF1Q14872 753 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 ARL6IP4Q66PJ3 421 aaKnown RBP18.32■□□□□ 0.52
SCARB2-210ENST00000638567 SGMS1Q86VZ5 419 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 PIGSQ96S52 555 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 MOCS3O95396 460 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 FDPSP14324 419 aaKnown RBP18.32■□□□□ 0.52
SCARB2-210ENST00000638567 SMTNP53814 917 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 MECOMQ03112 1051 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 ENAHQ8N8S7 591 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-210ENST00000638567 IRX2Q9BZI1 471 aaPredicted RBP18.32■□□□□ 0.52
SCARB2-210ENST00000638567 ABHD10Q9NUJ1 306 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 GSG1L2A8MUP6 293 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 HEXIM1O94992 359 aaKnown RBP18.32■□□□□ 0.52
SCARB2-210ENST00000638567 MYL1P05976 194 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 MRPS25P82663 173 aaKnown RBP18.32■□□□□ 0.52
SCARB2-210ENST00000638567 CCDC170Q8IYT3 715 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 CPXCR1Q8N123 301 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 THAP9Q9H5L6 903 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 EPB41L5Q9HCM4 733 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.32■□□□□ 0.52
SCARB2-210ENST00000638567 PCDHA1Q9Y5I3 950 aa18.32■□□□□ 0.52
SCARB2-210ENST00000638567 PPFIA4O75335 1185 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 SCNN1DP51172 638 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 WDR44Q5JSH3 913 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 DENND2CQ68D51 928 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 JRKLQ9Y4A0 524 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 PXDNLA1KZ92 1463 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 EXOC3L4Q17RC7 722 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 NR2F2P24468 414 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 MXRA7P84157 204 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 INTS8Q75QN2 995 aaKnown RBP18.31■□□□□ 0.52
SCARB2-210ENST00000638567 COA7Q96BR5 231 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 STK24Q9Y6E0 443 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 GAS7O60861 476 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 ATP5DP30049 168 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 MAP3K9P80192 1104 aa18.31■□□□□ 0.52
SCARB2-210ENST00000638567 ZC3H13Q5T200 1668 aaKnown RBP18.3■□□□□ 0.52
SCARB2-210ENST00000638567 CYP2D6P10635 497 aa18.3■□□□□ 0.52
SCARB2-210ENST00000638567 IRX3P78415 501 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-210ENST00000638567 PABPC4Q13310 644 aaKnown RBP eCLIP18.3■□□□□ 0.52
SCARB2-210ENST00000638567 UHMK1Q8TAS1 419 aaKnown RBP18.3■□□□□ 0.52
SCARB2-210ENST00000638567 CEP83Q9Y592 693 aa18.3■□□□□ 0.52
SCARB2-210ENST00000638567 SRGAP2O75044 1071 aa18.3■□□□□ 0.52
SCARB2-210ENST00000638567 FTCDO95954 541 aa18.3■□□□□ 0.52
SCARB2-210ENST00000638567 EPHB4P54760 987 aa18.3■□□□□ 0.52
SCARB2-210ENST00000638567 ALX1Q15699 326 aa18.3■□□□□ 0.52
SCARB2-210ENST00000638567 FNBP4Q8N3X1 1017 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-210ENST00000638567 NDST4Q9H3R1 872 aa18.3■□□□□ 0.52
SCARB2-210ENST00000638567 PTPRUQ92729 1446 aa18.3■□□□□ 0.52
SCARB2-210ENST00000638567 RGS16O15492 202 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-210ENST00000638567 LACTBP83111 547 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-210ENST00000638567 ANKRD7Q92527 254 aa18.3■□□□□ 0.52
SCARB2-210ENST00000638567 COL3A1P02461 1466 aaPredicted RBP18.3■□□□□ 0.52
SCARB2-210ENST00000638567 NMT2O60551 498 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 TEKT1Q969V4 418 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 SH2D4AQ9H788 454 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 PRCPP42785 496 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 KIF11P52732 1056 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 SLC7A5Q01650 507 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 KAZALD1Q96I82 304 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 TADA3O75528 432 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 MYCLP12524 364 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-210ENST00000638567 RFX5P48382 616 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-210ENST00000638567 NAA25Q14CX7 972 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 FUCA2Q9BTY2 467 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 BRIP1Q9BX63 1249 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 METTL14Q9HCE5 456 aaKnown RBP18.29■□□□□ 0.52
SCARB2-210ENST00000638567 AP5Z1O43299 807 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 TTLL12Q14166 644 aaPredicted RBP18.29■□□□□ 0.52
SCARB2-210ENST00000638567 TAOK1Q7L7X3 1001 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 CROCCP2Q86T23 111 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 FAM178BQ8IXR5 827 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 DNAI2Q9GZS0 605 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 RIC8AQ9NPQ8 531 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 ST7Q9NRC1 585 aa18.29■□□□□ 0.52
SCARB2-210ENST00000638567 ENGASEQ8NFI3 743 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 MGARPQ8TDB4 240 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 CPVLQ9H3G5 476 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 STK17AQ9UEE5 414 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 USTQ9Y2C2 406 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 COL4A3BPQ9Y5P4 624 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 LGALS16A8MUM7 142 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 PRDX5P30044 214 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 UAP1Q16222 522 aaPredicted RBP18.28■□□□□ 0.52
SCARB2-210ENST00000638567 RIPOR2Q9Y4F9 1068 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 LMTK3Q96Q04 1460 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 ATP2B4P23634 1241 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 ALDH3A1P30838 453 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 SLC16A2P36021 539 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 ANTXR2P58335 489 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 IFT74Q96LB3 600 aa18.28■□□□□ 0.52
SCARB2-210ENST00000638567 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.28■□□□□ 0.52
SCARB2-210ENST00000638567 ANKRD65E5RJM6 399 aa18.27■□□□□ 0.52
SCARB2-210ENST00000638567 FMR1Q06787 632 aaKnown RBP eCLIP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms