RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 HDAC6Q9UBN7 1215 aa16.25■□□□□ 0.19
CLN6-215ENST00000636674 CDK5RAP2Q96SN8 1893 aa16.25■□□□□ 0.19
CLN6-215ENST00000636674 ENC1O14682 589 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 OR52Z1P0C646 297 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 PLCG1P19174 1290 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 MIIPQ5JXC2 388 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 ZNF572Q7Z3I7 529 aaPredicted RBP16.24■□□□□ 0.19
CLN6-215ENST00000636674 KRT25Q7Z3Z0 450 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 CABP7Q86V35 215 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 SPZ1Q9BXG8 430 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 AGPAT5Q9NUQ2 364 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 PODXL2Q9NZ53 605 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 ZC3H4Q9UPT8 1303 aaKnown RBP16.24■□□□□ 0.19
CLN6-215ENST00000636674 VAV2P52735 878 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 ITIH3Q06033 890 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 TBC1D8BQ0IIM8 1120 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 IQCEQ6IPM2 695 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 CCDC102AQ96A19 550 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 NYXQ9GZU5 481 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 ABCB11O95342 1321 aa16.24■□□□□ 0.19
CLN6-215ENST00000636674 RCCD1A6NED2 376 aa16.23■□□□□ 0.19
CLN6-215ENST00000636674 PES1O00541 588 aaKnown RBP16.23■□□□□ 0.19
CLN6-215ENST00000636674 HOXA7P31268 230 aaPredicted RBP16.23■□□□□ 0.19
CLN6-215ENST00000636674 PDE4DQ08499 809 aa16.23■□□□□ 0.19
CLN6-215ENST00000636674 EZH2Q15910 746 aaKnown RBP16.23■□□□□ 0.19
CLN6-215ENST00000636674 PTF1AQ7RTS3 328 aa16.23■□□□□ 0.19
CLN6-215ENST00000636674 HEATR3Q7Z4Q2 680 aa16.23■□□□□ 0.19
CLN6-215ENST00000636674 DZIP1Q86YF9 867 aaKnown RBP16.23■□□□□ 0.19
CLN6-215ENST00000636674 LACRTQ9GZZ8 138 aa16.23■□□□□ 0.19
CLN6-215ENST00000636674 FEZ2Q9UHY8 353 aaPredicted RBP16.23■□□□□ 0.19
CLN6-215ENST00000636674 HPCAL4Q9UM19 191 aa16.23■□□□□ 0.19
CLN6-215ENST00000636674 CNTNAP4Q9C0A0 1308 aa16.23■□□□□ 0.19
CLN6-215ENST00000636674 PLSCR1O15162 318 aa16.23■□□□□ 0.19
CLN6-215ENST00000636674 PRPF6O94906 941 aaKnown RBP16.23■□□□□ 0.19
CLN6-215ENST00000636674 AMPD3Q01432 767 aa16.23■□□□□ 0.19
CLN6-215ENST00000636674 ANKRD40Q6AI12 368 aa16.23■□□□□ 0.19
CLN6-215ENST00000636674 COG1Q8WTW3 980 aa16.23■□□□□ 0.19
CLN6-215ENST00000636674 TFCP2L1Q9NZI6 479 aa16.23■□□□□ 0.19
CLN6-215ENST00000636674 SYF2O95926 243 aaKnown RBP16.22■□□□□ 0.19
CLN6-215ENST00000636674 PPP4CP60510 307 aa16.22■□□□□ 0.19
CLN6-215ENST00000636674 STK4Q13043 487 aa16.22■□□□□ 0.19
CLN6-215ENST00000636674 NONOQ15233 471 aaKnown RBP eCLIP16.22■□□□□ 0.195e-7■■■□□ 18
CLN6-215ENST00000636674 TXNRD1Q16881 649 aa16.22■□□□□ 0.19
CLN6-215ENST00000636674 CNNM4Q6P4Q7 775 aa16.22■□□□□ 0.19
CLN6-215ENST00000636674 SRLQ86TD4 932 aa16.22■□□□□ 0.19
CLN6-215ENST00000636674 PLAGL2Q9UPG8 496 aa16.22■□□□□ 0.19
CLN6-215ENST00000636674 TNRC6CQ9HCJ0 1690 aaKnown RBP16.22■□□□□ 0.19
CLN6-215ENST00000636674 SNED1Q8TER0 1413 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 KCNQ2O43526 872 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 LCA5LO95447 670 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 TSPY3P0CV98 308 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 TSPY8P0CW00 308 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 PRLRP16471 622 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 SMARCA1P28370 1054 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 MTIF2P46199 727 aaKnown RBP16.21■□□□□ 0.19
CLN6-215ENST00000636674 ASIC1P78348 528 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 KIF5AQ12840 1032 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 FKBP15Q5T1M5 1219 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 CENPPQ6IPU0 288 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 AMOTL1Q8IY63 956 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 LINC00116Q8NCU8 138 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 TRIM58Q8NG06 486 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 SECISBP2LQ93073 1101 aaKnown RBP16.21■□□□□ 0.19
CLN6-215ENST00000636674 NLRP3Q96P20 1036 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 NOC4LQ9BVI4 516 aaKnown RBP16.21■□□□□ 0.19
CLN6-215ENST00000636674 TFR2Q9UP52 801 aa16.21■□□□□ 0.19
CLN6-215ENST00000636674 SRGAP2O75044 1071 aa16.21■□□□□ 0.18
CLN6-215ENST00000636674 RNF40O75150 1001 aa16.21■□□□□ 0.18
CLN6-215ENST00000636674 KLK7P49862 253 aa16.21■□□□□ 0.18
CLN6-215ENST00000636674 TBC1D9BQ66K14 1250 aa16.21■□□□□ 0.18
CLN6-215ENST00000636674 FOXR2Q6PJQ5 311 aa16.21■□□□□ 0.18
CLN6-215ENST00000636674 KIAA0895Q8NCT3 520 aa16.21■□□□□ 0.18
CLN6-215ENST00000636674 WDR66Q8TBY9 1149 aa16.21■□□□□ 0.18
CLN6-215ENST00000636674 DYNLL2Q96FJ2 89 aa16.21■□□□□ 0.18
CLN6-215ENST00000636674 TMEM47Q9BQJ4 181 aa16.21■□□□□ 0.18
CLN6-215ENST00000636674 FAM204AQ9H8W3 233 aa16.21■□□□□ 0.18
CLN6-215ENST00000636674 MKNK2Q9HBH9 465 aa16.21■□□□□ 0.18
CLN6-215ENST00000636674 ESYT2A0FGR8 921 aa16.2■□□□□ 0.18
CLN6-215ENST00000636674 USP17L3A6NCW0 530 aa16.2■□□□□ 0.18
CLN6-215ENST00000636674 USP17L4A6NCW7 530 aa16.2■□□□□ 0.18
CLN6-215ENST00000636674 GNA11P29992 359 aa16.2■□□□□ 0.18
CLN6-215ENST00000636674 GSTO1P78417 241 aa16.2■□□□□ 0.18
CLN6-215ENST00000636674 USP17L1Q7RTZ2 530 aa16.2■□□□□ 0.18
CLN6-215ENST00000636674 NEK8Q86SG6 692 aa16.2■□□□□ 0.18
CLN6-215ENST00000636674 MMGT1Q8N4V1 131 aa16.2■□□□□ 0.18
CLN6-215ENST00000636674 PLIN2Q99541 437 aa16.2■□□□□ 0.18
CLN6-215ENST00000636674 MMTAG2Q9BU76 263 aaKnown RBP16.2■□□□□ 0.18
CLN6-215ENST00000636674 SNX12Q9UMY4 172 aa16.2■□□□□ 0.18
CLN6-215ENST00000636674 SIK3Q9Y2K2 1263 aa16.2■□□□□ 0.18
CLN6-215ENST00000636674 JRKLQ9Y4A0 524 aa16.2■□□□□ 0.18
CLN6-215ENST00000636674 MYO1CO00159 1063 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 PDE2AO00408 941 aaPredicted RBP16.19■□□□□ 0.18
CLN6-215ENST00000636674 ZNF263O14978 683 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 IDEP14735 1019 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 RASA1P20936 1047 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 SPA17Q15506 151 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 CCNI2Q6ZMN8 369 aaPredicted RBP16.19■□□□□ 0.18
CLN6-215ENST00000636674 CERS3Q8IU89 383 aa16.19■□□□□ 0.18
CLN6-215ENST00000636674 SH3RF3Q8TEJ3 882 aaPredicted RBP16.19■□□□□ 0.18
CLN6-215ENST00000636674 SH2D4AQ9H788 454 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms