RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 ANKRD33Q7Z3H0 272 aa22.11■■□□□ 1.13
CLN6-213ENST00000636212 MCF2L2Q86YR7 1114 aa22.11■■□□□ 1.13
CLN6-213ENST00000636212 PURBQ96QR8 312 aaKnown RBP22.11■■□□□ 1.13
CLN6-213ENST00000636212 CPVLQ9H3G5 476 aa22.11■■□□□ 1.13
CLN6-213ENST00000636212 VAT1LQ9HCJ6 419 aa22.11■■□□□ 1.13
CLN6-213ENST00000636212 GNEQ9Y223 722 aaKnown RBP22.11■■□□□ 1.13
CLN6-213ENST00000636212 TRIM43BA6NCK2 446 aa22.1■■□□□ 1.13
CLN6-213ENST00000636212 SMPD1P17405 629 aa22.1■■□□□ 1.13
CLN6-213ENST00000636212 NKX3-2P78367 333 aa22.1■■□□□ 1.13
CLN6-213ENST00000636212 BEX3Q00994 111 aa22.1■■□□□ 1.13
CLN6-213ENST00000636212 FSCN1Q16658 493 aaKnown RBP22.1■■□□□ 1.13
CLN6-213ENST00000636212 TAPT1Q6NXT6 567 aa22.1■■□□□ 1.13
CLN6-213ENST00000636212 CYB5R4Q7L1T6 521 aa22.1■■□□□ 1.13
CLN6-213ENST00000636212 SH3RF1Q7Z6J0 888 aa22.1■■□□□ 1.13
CLN6-213ENST00000636212 FBXO11Q86XK2 927 aa22.1■■□□□ 1.13
CLN6-213ENST00000636212 TRIM43Q96BQ3 446 aaPredicted RBP22.1■■□□□ 1.13
CLN6-213ENST00000636212 PDGFCQ9NRA1 345 aa22.1■■□□□ 1.13
CLN6-213ENST00000636212 MRPL11Q9Y3B7 192 aaKnown RBP22.1■■□□□ 1.13
CLN6-213ENST00000636212 LTBP2Q14767 1821 aa22.09■■□□□ 1.13
CLN6-213ENST00000636212 E7EWF7 191 aa22.09■■□□□ 1.13
CLN6-213ENST00000636212 WTAPQ15007 396 aa22.09■■□□□ 1.13
CLN6-213ENST00000636212 SEC23AQ15436 765 aa22.09■■□□□ 1.13
CLN6-213ENST00000636212 CENPQQ7L2Z9 268 aaPredicted RBP22.09■■□□□ 1.13
CLN6-213ENST00000636212 WDR11Q9BZH6 1224 aa22.09■■□□□ 1.13
CLN6-213ENST00000636212 LRRC37A2A6NM11 1700 aa22.09■■□□□ 1.13
CLN6-213ENST00000636212 KLRF2D3W0D1 207 aa22.08■■□□□ 1.13
CLN6-213ENST00000636212 ARVCFO00192 962 aa22.08■■□□□ 1.13
CLN6-213ENST00000636212 KIAA0355O15063 1070 aa22.08■■□□□ 1.13
CLN6-213ENST00000636212 IRX5P78411 483 aaPredicted RBP22.08■■□□□ 1.13
CLN6-213ENST00000636212 TRAF1Q13077 416 aa22.08■■□□□ 1.13
CLN6-213ENST00000636212 QRICH1Q2TAL8 776 aa22.08■■□□□ 1.13
CLN6-213ENST00000636212 DUSP28Q4G0W2 176 aa22.08■■□□□ 1.13
CLN6-213ENST00000636212 BRDTQ58F21 947 aaPredicted RBP22.08■■□□□ 1.13
CLN6-213ENST00000636212 MAP4K1Q92918 833 aa22.08■■□□□ 1.13
CLN6-213ENST00000636212 AMNQ9BXJ7 453 aa22.08■■□□□ 1.13
CLN6-213ENST00000636212 SEZ6LQ9BYH1 1024 aa22.08■■□□□ 1.13
CLN6-213ENST00000636212 JMJD4Q9H9V9 463 aa22.08■■□□□ 1.13
CLN6-213ENST00000636212 DDX49Q9Y6V7 483 aaKnown RBP22.08■■□□□ 1.13
CLN6-213ENST00000636212 FAAP100Q0VG06 881 aa22.07■■□□□ 1.12
CLN6-213ENST00000636212 RBM8AQ9Y5S9 174 aaKnown RBP22.07■■□□□ 1.12
CLN6-213ENST00000636212 NKRFO15226 690 aaKnown RBP eCLIP22.06■■□□□ 1.12
CLN6-213ENST00000636212 CTAGE5O15320 804 aa22.06■■□□□ 1.12
CLN6-213ENST00000636212 CPT1AP50416 773 aa22.06■■□□□ 1.12
CLN6-213ENST00000636212 PPP2R5BQ15173 497 aa22.06■■□□□ 1.12
CLN6-213ENST00000636212 TMEM67Q5HYA8 995 aa22.06■■□□□ 1.12
CLN6-213ENST00000636212 CXCL17Q6UXB2 119 aa22.06■■□□□ 1.12
CLN6-213ENST00000636212 SCFD2Q8WU76 684 aa22.06■■□□□ 1.12
CLN6-213ENST00000636212 POLR3EQ9NVU0 708 aa22.06■■□□□ 1.12
CLN6-213ENST00000636212 LCTP09848 1927 aa22.06■■□□□ 1.12
CLN6-213ENST00000636212 CDK7P50613 346 aa22.05■■□□□ 1.12
CLN6-213ENST00000636212 FPGSQ05932 587 aa22.05■■□□□ 1.12
CLN6-213ENST00000636212 CATIPQ7Z7H3 387 aa22.05■■□□□ 1.12
CLN6-213ENST00000636212 STAG2Q8N3U4 1231 aa22.05■■□□□ 1.12
CLN6-213ENST00000636212 NSUN6Q8TEA1 469 aaKnown RBP22.05■■□□□ 1.12
CLN6-213ENST00000636212 GPHNQ9NQX3 736 aaPredicted RBP22.05■■□□□ 1.12
CLN6-213ENST00000636212 MAD2L2Q9UI95 211 aa22.05■■□□□ 1.12
CLN6-213ENST00000636212 DNAH12Q6ZR08 3092 aa22.04■■□□□ 1.12
CLN6-213ENST00000636212 RBM47A0AV96 593 aaKnown RBP22.04■■□□□ 1.12
CLN6-213ENST00000636212 ZBTB5O15062 677 aa22.04■■□□□ 1.12
CLN6-213ENST00000636212 EDNRBP24530 442 aa22.04■■□□□ 1.12
CLN6-213ENST00000636212 ITGA7Q13683 1181 aa22.04■■□□□ 1.12
CLN6-213ENST00000636212 CASC1Q6TDU7 716 aa22.04■■□□□ 1.12
CLN6-213ENST00000636212 DEFB123Q8N688 67 aa22.04■■□□□ 1.12
CLN6-213ENST00000636212 OR6J1Q8NGC5 347 aa22.04■■□□□ 1.12
CLN6-213ENST00000636212 RANBP2P49792 3224 aaKnown RBP22.04■■□□□ 1.12
CLN6-213ENST00000636212 PALM3A6NDB9 673 aaPredicted RBP22.03■■□□□ 1.12
CLN6-213ENST00000636212 TIMP1P01033 207 aa22.03■■□□□ 1.12
CLN6-213ENST00000636212 TTLL4Q14679 1199 aa22.03■■□□□ 1.12
CLN6-213ENST00000636212 GRM4Q14833 912 aa22.03■■□□□ 1.12
CLN6-213ENST00000636212 SHHQ15465 462 aa22.03■■□□□ 1.12
CLN6-213ENST00000636212 ARHGEF16Q5VV41 709 aa22.03■■□□□ 1.12
CLN6-213ENST00000636212 IWS1Q96ST2 819 aa22.03■■□□□ 1.12
CLN6-213ENST00000636212 PCDHA1Q9Y5I3 950 aa22.03■■□□□ 1.12
CLN6-213ENST00000636212 CFBP00751 764 aa22.02■■□□□ 1.12
CLN6-213ENST00000636212 TXNP10599 105 aaKnown RBP22.02■■□□□ 1.12
CLN6-213ENST00000636212 STXBP2Q15833 593 aa22.02■■□□□ 1.12
CLN6-213ENST00000636212 BMP2KLQ5H9B9 411 aa22.02■■□□□ 1.12
CLN6-213ENST00000636212 CHST3Q7LGC8 479 aa22.02■■□□□ 1.12
CLN6-213ENST00000636212 HOMER1Q86YM7 354 aa22.02■■□□□ 1.12
CLN6-213ENST00000636212 FAM126BQ8IXS8 530 aa22.02■■□□□ 1.12
CLN6-213ENST00000636212 SYTL5Q8TDW5 730 aaPredicted RBP22.02■■□□□ 1.12
CLN6-213ENST00000636212 RMDN3Q96TC7 470 aa22.02■■□□□ 1.12
CLN6-213ENST00000636212 ESYT1Q9BSJ8 1104 aa22.02■■□□□ 1.12
CLN6-213ENST00000636212 MAP3K20Q9NYL2 800 aaKnown RBP22.02■■□□□ 1.12
CLN6-213ENST00000636212 TBX21Q9UL17 535 aa22.02■■□□□ 1.12
CLN6-213ENST00000636212 MYL3P08590 195 aa22.01■■□□□ 1.11
CLN6-213ENST00000636212 MFSD5Q6N075 450 aa22.01■■□□□ 1.11
CLN6-213ENST00000636212 STOX1Q6ZVD7 989 aa22.01■■□□□ 1.11
CLN6-213ENST00000636212 TMTC2Q8N394 836 aa22.01■■□□□ 1.11
CLN6-213ENST00000636212 TMEM199Q8N511 208 aa22.01■■□□□ 1.11
CLN6-213ENST00000636212 SAMD3Q8N6K7 520 aa22.01■■□□□ 1.11
CLN6-213ENST00000636212 TAAR1Q96RJ0 339 aa22.01■■□□□ 1.11
CLN6-213ENST00000636212 MTA3Q9BTC8 594 aa22.01■■□□□ 1.11
CLN6-213ENST00000636212 ANO2Q9NQ90 1003 aa22.01■■□□□ 1.11
CLN6-213ENST00000636212 MYH6P13533 1939 aa22.01■■□□□ 1.11
CLN6-213ENST00000636212 KPNA6O60684 536 aa22■■□□□ 1.11
CLN6-213ENST00000636212 ITGB8P26012 769 aa22■■□□□ 1.11
CLN6-213ENST00000636212 KIF5BP33176 963 aa22■■□□□ 1.11
CLN6-213ENST00000636212 MCM5P33992 734 aa22■■□□□ 1.11
CLN6-213ENST00000636212 PPIGQ13427 754 aaKnown RBP eCLIP22■■□□□ 1.117e-7■□□□□ 9.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms