RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 PPP4R3AQ6IN85 833 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 TRPM4Q8TD43 1214 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 TMEM39BQ9GZU3 492 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 PSTPIP2Q9H939 334 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 VEZTQ9HBM0 779 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 IMPACTQ9P2X3 320 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 ZBTB21Q9ULJ3 1066 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 CLEC11AQ9Y240 323 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 PPP1R3GB7ZBB8 358 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 SLC37A4O43826 429 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 RAD21O60216 631 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 TDP2O95551 362 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 MMP14P50281 582 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 NOLC1Q14978 699 aaKnown RBP eCLIP22.2■■□□□ 1.14
TREX1-205ENST00000625293 SYDE2Q5VT97 1194 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 RRAGBQ5VZM2 374 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 RBM46Q8TBY0 533 aaKnown RBP22.2■■□□□ 1.14
TREX1-205ENST00000625293 BLZF1Q9H2G9 400 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 PCDHA1Q9Y5I3 950 aa22.2■■□□□ 1.14
TREX1-205ENST00000625293 TNNI2P48788 182 aa22.19■■□□□ 1.14
TREX1-205ENST00000625293 FXR2P51116 673 aaKnown RBP eCLIP22.19■■□□□ 1.14
TREX1-205ENST00000625293 ZNF280AP59817 542 aaPredicted RBP22.19■■□□□ 1.14
TREX1-205ENST00000625293 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.19■■□□□ 1.14
TREX1-205ENST00000625293 LRRC8AQ8IWT6 810 aa22.19■■□□□ 1.14
TREX1-205ENST00000625293 C17orf53Q8N3J3 647 aaPredicted RBP22.19■■□□□ 1.14
TREX1-205ENST00000625293 MYOZ2Q9NPC6 264 aa22.19■■□□□ 1.14
TREX1-205ENST00000625293 KBTBD4Q9NVX7 518 aa22.19■■□□□ 1.14
TREX1-205ENST00000625293 TMX2Q9Y320 296 aa22.19■■□□□ 1.14
TREX1-205ENST00000625293 NFE2L3Q9Y4A8 694 aa22.19■■□□□ 1.14
TREX1-205ENST00000625293 CALCRLQ16602 461 aa22.18■■□□□ 1.14
TREX1-205ENST00000625293 NBPF9Q3BBW0 867 aa22.18■■□□□ 1.14
TREX1-205ENST00000625293 TBC1D10BQ4KMP7 808 aaPredicted RBP22.18■■□□□ 1.14
TREX1-205ENST00000625293 CABP7Q86V35 215 aa22.18■■□□□ 1.14
TREX1-205ENST00000625293 TRMT44Q8IYL2 757 aaKnown RBP22.18■■□□□ 1.14
TREX1-205ENST00000625293 DPF2Q92785 391 aa22.18■■□□□ 1.14
TREX1-205ENST00000625293 MMTAG2Q9BU76 263 aaKnown RBP22.18■■□□□ 1.14
TREX1-205ENST00000625293 CUEDC2Q9H467 287 aa22.18■■□□□ 1.14
TREX1-205ENST00000625293 MAGEF1Q9HAY2 307 aa22.18■■□□□ 1.14
TREX1-205ENST00000625293 TMEM232C9JQI7 657 aa22.17■■□□□ 1.14
TREX1-205ENST00000625293 MYL1P05976 194 aa22.17■■□□□ 1.14
TREX1-205ENST00000625293 ECE1P42892 770 aa22.17■■□□□ 1.14
TREX1-205ENST00000625293 MAP1SQ66K74 1059 aaPredicted RBP22.17■■□□□ 1.14
TREX1-205ENST00000625293 ACER1Q8TDN7 264 aa22.17■■□□□ 1.14
TREX1-205ENST00000625293 AMNQ9BXJ7 453 aa22.17■■□□□ 1.14
TREX1-205ENST00000625293 ARHGEF10LQ9HCE6 1279 aa22.17■■□□□ 1.14
TREX1-205ENST00000625293 ADARB2Q9NS39 739 aaKnown RBP22.17■■□□□ 1.14
TREX1-205ENST00000625293 CBFA2T2O43439 604 aa22.17■■□□□ 1.14
TREX1-205ENST00000625293 RPN1P04843 607 aaKnown RBP22.17■■□□□ 1.14
TREX1-205ENST00000625293 TECP42680 631 aa22.17■■□□□ 1.14
TREX1-205ENST00000625293 ARID5BQ14865 1188 aa22.17■■□□□ 1.14
TREX1-205ENST00000625293 KIAA1755Q5JYT7 1200 aa22.17■■□□□ 1.14
TREX1-205ENST00000625293 FILIP1Q7Z7B0 1213 aa22.17■■□□□ 1.14
TREX1-205ENST00000625293 H7C1D1 291 aa22.16■■□□□ 1.14
TREX1-205ENST00000625293 PLCG1P19174 1290 aa22.16■■□□□ 1.14
TREX1-205ENST00000625293 UBASH3AP57075 661 aa22.16■■□□□ 1.14
TREX1-205ENST00000625293 GSDMDP57764 484 aa22.16■■□□□ 1.14
TREX1-205ENST00000625293 RMND1Q9NWS8 449 aa22.16■■□□□ 1.14
TREX1-205ENST00000625293 MEIS2O14770 477 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 GCFC2P16383 781 aaKnown RBP22.15■■□□□ 1.14
TREX1-205ENST00000625293 RPS12P25398 132 aaKnown RBP22.15■■□□□ 1.14
TREX1-205ENST00000625293 PNMA8AQ86V59 439 aaPredicted RBP22.15■■□□□ 1.14
TREX1-205ENST00000625293 SMYD4Q8IYR2 804 aaPredicted RBP22.15■■□□□ 1.14
TREX1-205ENST00000625293 SMC1BQ8NDV3 1235 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 NAP1L5Q96NT1 182 aaPredicted RBP22.15■■□□□ 1.14
TREX1-205ENST00000625293 INTS13Q9NVM9 706 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 ASTN2O75129 1339 aaPredicted RBP22.15■■□□□ 1.14
TREX1-205ENST00000625293 USP17L15C9J2P7 530 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 USP17L13C9JLJ4 530 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 USP17L11C9JVI0 530 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 USP17L18D6R9N7 530 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 USP17L22D6RA61 530 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 USP17L17D6RBQ6 530 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 USP17L19D6RCP7 530 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 USP17L20D6RJB6 530 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 KLRC4O43908 158 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 SERPINC1P01008 464 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 CAP2P40123 477 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 TXKP42681 527 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 USP17L24Q0WX57 530 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 SEMA3FQ13275 785 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 AP3B2Q13367 1082 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 KCNB1Q14721 858 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 ZNF658Q5TYW1 1059 aaPredicted RBP22.15■■□□□ 1.14
TREX1-205ENST00000625293 SPATA1Q5VX52 437 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 CHADLQ6NUI6 762 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 USP17L6PQ6QN14 398 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 TMC6Q7Z403 805 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 LDHDQ86WU2 507 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 FBXO11Q86XK2 927 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 CRYGNQ8WXF5 182 aa22.15■■□□□ 1.14
TREX1-205ENST00000625293 SYNRGQ9UMZ2 1314 aa22.14■■□□□ 1.13
TREX1-205ENST00000625293 SNAP25P60880 206 aa22.14■■□□□ 1.13
TREX1-205ENST00000625293 PDIA5Q14554 519 aa22.14■■□□□ 1.13
TREX1-205ENST00000625293 DLK2Q6UY11 383 aa22.14■■□□□ 1.13
TREX1-205ENST00000625293 USP50Q70EL3 339 aaPredicted RBP22.14■■□□□ 1.13
TREX1-205ENST00000625293 RASSF8Q8NHQ8 419 aa22.14■■□□□ 1.13
TREX1-205ENST00000625293 HAS1Q92839 578 aa22.14■■□□□ 1.13
TREX1-205ENST00000625293 MBOAT7Q96N66 472 aa22.14■■□□□ 1.13
TREX1-205ENST00000625293 P2RX7Q99572 595 aaKnown RBP22.14■■□□□ 1.13
TREX1-205ENST00000625293 NAP1L4Q99733 375 aaKnown RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms