RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 CCDC47Q96A33 483 aaKnown RBP13.18□□□□□ -0.3
C11orf54-215ENST00000617482 AK8Q96MA6 479 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 C6orf50Q9HD87 102 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 SLC39A2Q9NP94 309 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 BICDL2A1A5D9 508 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 MACROD2A1Z1Q3 448 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 KRT86O43790 486 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 ERCC3P19447 782 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 CYLC1P35663 651 aaPredicted RBP13.18□□□□□ -0.3
C11orf54-215ENST00000617482 MIIPQ5JXC2 388 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 NEK8Q86SG6 692 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 POTEDQ86YR6 584 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 GPIHBP1Q8IV16 184 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 CCDC102AQ96A19 550 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 RRP36Q96EU6 259 aaKnown RBP13.18□□□□□ -0.3
C11orf54-215ENST00000617482 PIGSQ96S52 555 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 C7orf25Q9BPX7 421 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 LZTS2Q9BRK4 669 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 CUEDC2Q9H467 287 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 TMEM260Q9NX78 707 aa13.18□□□□□ -0.3
C11orf54-215ENST00000617482 LRRIQ3A6PVS8 624 aaPredicted RBP13.17□□□□□ -0.3
C11orf54-215ENST00000617482 ZNF185O15231 689 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 EIF3JO75822 258 aaKnown RBP13.17□□□□□ -0.3
C11orf54-215ENST00000617482 IPO7O95373 1038 aaKnown RBP13.17□□□□□ -0.3
C11orf54-215ENST00000617482 BTDP43251 543 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 PPP4CP60510 307 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 ZBED6P86452 979 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 SOGA3Q5TF21 947 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 TMED8Q6PL24 325 aaPredicted RBP13.17□□□□□ -0.3
C11orf54-215ENST00000617482 C8orf37Q96NL8 207 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 MMTAG2Q9BU76 263 aaKnown RBP13.17□□□□□ -0.3
C11orf54-215ENST00000617482 NUP58Q9BVL2 599 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 SPZ1Q9BXG8 430 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 SEMA6BQ9H3T3 888 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 SEC63Q9UGP8 760 aaKnown RBP13.17□□□□□ -0.3
C11orf54-215ENST00000617482 FAN1Q9Y2M0 1017 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
C11orf54-215ENST00000617482 ROBO3Q96MS0 1386 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 ZMYND10O75800 440 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 PLEKP08567 350 aaPredicted RBP13.17□□□□□ -0.3
C11orf54-215ENST00000617482 GNA11P29992 359 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 DYMQ7RTS9 669 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 KRT26Q7Z3Y9 468 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 KIAA0895Q8NCT3 520 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 EXOC4Q96A65 974 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 CEP95Q96GE4 821 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 RTFDC1Q9BY42 306 aaPredicted RBP13.17□□□□□ -0.3
C11orf54-215ENST00000617482 GBP3Q9H0R5 595 aa13.17□□□□□ -0.3
C11orf54-215ENST00000617482 LAMB1P07942 1786 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 USP17L5A8MUK1 530 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 LDHCP07864 332 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 USP14P54578 494 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 AMPD3Q01432 767 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 PAPD7Q5XG87 772 aaKnown RBP13.16□□□□□ -0.3
C11orf54-215ENST00000617482 ZNF804AQ7Z570 1209 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 FAM114A1Q8IWE2 563 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 TEX11Q8IYF3 940 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 CALML4Q96GE6 196 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 HINFPQ9BQA5 517 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 MAGEF1Q9HAY2 307 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 JADE2Q9NQC1 790 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 LEMD3Q9Y2U8 911 aa13.16□□□□□ -0.3
C11orf54-215ENST00000617482 GRAPQ13588 217 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 ZSCAN26Q16670 478 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 WDR93Q6P2C0 686 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 RETREG2Q8NC44 543 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 GRAPLQ8TC17 118 aaPredicted RBP13.15□□□□□ -0.3
C11orf54-215ENST00000617482 GDAP1L1Q96MZ0 367 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 FAM207AQ9NSI2 230 aaPredicted RBP13.15□□□□□ -0.3
C11orf54-215ENST00000617482 FRMPD2Q68DX3 1309 aaPredicted RBP13.15□□□□□ -0.3
C11orf54-215ENST00000617482 EIF3CLB5ME19 914 aaKnown RBP13.15□□□□□ -0.3
C11orf54-215ENST00000617482 IDEP14735 1019 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 SEMA3FQ13275 785 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 HSP90B2PQ58FF3 399 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 FKBP15Q5T1M5 1219 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 RC3H1Q5TC82 1133 aaKnown RBP13.15□□□□□ -0.3
C11orf54-215ENST00000617482 CNNM4Q6P4Q7 775 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 C16orf86Q6ZW13 317 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 SV2BQ7L1I2 683 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 CCDC170Q8IYT3 715 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 REXO1Q8N1G1 1221 aaKnown RBP13.15□□□□□ -0.3
C11orf54-215ENST00000617482 NEDD1Q8NHV4 660 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 CAGE1Q8TC20 777 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 SMCR8Q8TEV9 937 aaPredicted RBP13.15□□□□□ -0.3
C11orf54-215ENST00000617482 SECISBP2LQ93073 1101 aaKnown RBP13.15□□□□□ -0.3
C11orf54-215ENST00000617482 COA7Q96BR5 231 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 CCDC42Q96M95 316 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 EIF3CQ99613 913 aaKnown RBP13.15□□□□□ -0.3
C11orf54-215ENST00000617482 LRWD1Q9UFC0 647 aa13.15□□□□□ -0.3
C11orf54-215ENST00000617482 CCNL1Q9UK58 526 aaPredicted RBP13.15□□□□□ -0.3
C11orf54-215ENST00000617482 MYMKA6NI61 221 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 PDE2AO00408 941 aaPredicted RBP13.14□□□□□ -0.31
C11orf54-215ENST00000617482 ZNF263O14978 683 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 EPHB6O15197 1021 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 TUBBP07437 444 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
C11orf54-215ENST00000617482 NT5C2P49902 561 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 KIF5AQ12840 1032 aa13.14□□□□□ -0.31
C11orf54-215ENST00000617482 CCDC96Q2M329 555 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms