RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 WTAPQ15007 396 aa21.22■□□□□ 0.99
VCX3A-203ENST00000612369 QRICH1Q2TAL8 776 aa21.22■□□□□ 0.99
VCX3A-203ENST00000612369 LRIT3Q3SXY7 679 aa21.22■□□□□ 0.99
VCX3A-203ENST00000612369 EEPD1Q7L9B9 569 aa21.22■□□□□ 0.99
VCX3A-203ENST00000612369 ANKRD33Q7Z3H0 272 aa21.22■□□□□ 0.99
VCX3A-203ENST00000612369 FBXO16Q8IX29 292 aaPredicted RBP21.22■□□□□ 0.99
VCX3A-203ENST00000612369 STAG2Q8N3U4 1231 aa21.22■□□□□ 0.99
VCX3A-203ENST00000612369 MTA3Q9BTC8 594 aa21.22■□□□□ 0.99
VCX3A-203ENST00000612369 LSG1Q9H089 658 aaKnown RBP21.22■□□□□ 0.99
VCX3A-203ENST00000612369 PRDM5Q9NQX1 630 aaPredicted RBP21.22■□□□□ 0.99
VCX3A-203ENST00000612369 MAD2L2Q9UI95 211 aa21.22■□□□□ 0.99
VCX3A-203ENST00000612369 MRPL11Q9Y3B7 192 aaKnown RBP21.22■□□□□ 0.99
VCX3A-203ENST00000612369 MROH7Q68CQ1 1323 aa21.22■□□□□ 0.99
VCX3A-203ENST00000612369 CTAGE5O15320 804 aa21.21■□□□□ 0.99
VCX3A-203ENST00000612369 CLTBP09497 229 aa21.21■□□□□ 0.99
VCX3A-203ENST00000612369 SMPD1P17405 629 aa21.21■□□□□ 0.99
VCX3A-203ENST00000612369 STOX1Q6ZVD7 989 aa21.21■□□□□ 0.99
VCX3A-203ENST00000612369 TLK2Q86UE8 772 aa21.21■□□□□ 0.99
VCX3A-203ENST00000612369 VAT1LQ9HCJ6 419 aa21.21■□□□□ 0.99
VCX3A-203ENST00000612369 PDGFCQ9NRA1 345 aa21.21■□□□□ 0.99
VCX3A-203ENST00000612369 TAF6LQ9Y6J9 622 aa21.21■□□□□ 0.99
VCX3A-203ENST00000612369 RBM47A0AV96 593 aaKnown RBP21.2■□□□□ 0.98
VCX3A-203ENST00000612369 DCDC2CA8MYV0 355 aa21.2■□□□□ 0.98
VCX3A-203ENST00000612369 ZEB2O60315 1214 aa21.2■□□□□ 0.98
VCX3A-203ENST00000612369 CABYRO75952 493 aa21.2■□□□□ 0.98
VCX3A-203ENST00000612369 EDNRBP24530 442 aa21.2■□□□□ 0.98
VCX3A-203ENST00000612369 PDE4DQ08499 809 aa21.2■□□□□ 0.98
VCX3A-203ENST00000612369 TRAF1Q13077 416 aa21.2■□□□□ 0.98
VCX3A-203ENST00000612369 GRM4Q14833 912 aa21.2■□□□□ 0.98
VCX3A-203ENST00000612369 DUSP28Q4G0W2 176 aa21.2■□□□□ 0.98
VCX3A-203ENST00000612369 MB21D2Q8IYB1 491 aaPredicted RBP21.2■□□□□ 0.98
VCX3A-203ENST00000612369 MTMR8Q96EF0 704 aa21.2■□□□□ 0.98
VCX3A-203ENST00000612369 AMNQ9BXJ7 453 aa21.2■□□□□ 0.98
VCX3A-203ENST00000612369 DDX49Q9Y6V7 483 aaKnown RBP21.2■□□□□ 0.98
VCX3A-203ENST00000612369 A0A0U1RQG5 324 aaPredicted RBP21.19■□□□□ 0.98
VCX3A-203ENST00000612369 ZBTB5O15062 677 aa21.19■□□□□ 0.98
VCX3A-203ENST00000612369 DYNC1LI2O43237 492 aaPredicted RBP21.19■□□□□ 0.98
VCX3A-203ENST00000612369 PQBP1O60828 265 aaKnown RBP21.19■□□□□ 0.98
VCX3A-203ENST00000612369 CDK7P50613 346 aa21.19■□□□□ 0.98
VCX3A-203ENST00000612369 IRX5P78411 483 aaPredicted RBP21.19■□□□□ 0.98
VCX3A-203ENST00000612369 TROAPQ12815 778 aa21.19■□□□□ 0.98
VCX3A-203ENST00000612369 FSCN1Q16658 493 aaKnown RBP21.19■□□□□ 0.98
VCX3A-203ENST00000612369 TMEM67Q5HYA8 995 aa21.19■□□□□ 0.98
VCX3A-203ENST00000612369 GPR153Q6NV75 609 aa21.19■□□□□ 0.98
VCX3A-203ENST00000612369 IGDCC4Q8TDY8 1250 aa21.19■□□□□ 0.98
VCX3A-203ENST00000612369 VTI1AQ96AJ9 217 aa21.19■□□□□ 0.98
VCX3A-203ENST00000612369 SEZ6LQ9BYH1 1024 aa21.19■□□□□ 0.98
VCX3A-203ENST00000612369 MYH6P13533 1939 aa21.19■□□□□ 0.98
VCX3A-203ENST00000612369 LTBP2Q14767 1821 aa21.18■□□□□ 0.98
VCX3A-203ENST00000612369 LAMA3Q16787 3333 aa21.18■□□□□ 0.98
VCX3A-203ENST00000612369 TRIM43BA6NCK2 446 aa21.18■□□□□ 0.98
VCX3A-203ENST00000612369 KIAA0355O15063 1070 aa21.18■□□□□ 0.98
VCX3A-203ENST00000612369 SH3RF1Q7Z6J0 888 aa21.18■□□□□ 0.98
VCX3A-203ENST00000612369 CATIPQ7Z7H3 387 aa21.18■□□□□ 0.98
VCX3A-203ENST00000612369 SAMD3Q8N6K7 520 aa21.18■□□□□ 0.98
VCX3A-203ENST00000612369 TRIM43Q96BQ3 446 aaPredicted RBP21.18■□□□□ 0.98
VCX3A-203ENST00000612369 MAP3K14Q99558 947 aa21.18■□□□□ 0.98
VCX3A-203ENST00000612369 WDR11Q9BZH6 1224 aa21.18■□□□□ 0.98
VCX3A-203ENST00000612369 RIOX1Q9H6W3 641 aa21.18■□□□□ 0.98
VCX3A-203ENST00000612369 MAP3K20Q9NYL2 800 aaKnown RBP21.18■□□□□ 0.98
VCX3A-203ENST00000612369 SZT2Q5T011 3432 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 ARVCFO00192 962 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 SOX1O00570 391 aaPredicted RBP21.17■□□□□ 0.98
VCX3A-203ENST00000612369 NKRFO15226 690 aaKnown RBP eCLIP21.17■□□□□ 0.98
VCX3A-203ENST00000612369 ANTXR2P58335 489 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 BEX3Q00994 111 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 FAAP100Q0VG06 881 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 NECTIN1Q15223 517 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 CASC1Q6TDU7 716 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 CHST3Q7LGC8 479 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 TMTC2Q8N394 836 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 SYTL5Q8TDW5 730 aaPredicted RBP21.17■□□□□ 0.98
VCX3A-203ENST00000612369 NSUN6Q8TEA1 469 aaKnown RBP21.17■□□□□ 0.98
VCX3A-203ENST00000612369 SCFD2Q8WU76 684 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 BADQ92934 168 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 IWS1Q96ST2 819 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 ANO2Q9NQ90 1003 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 TMEM39AQ9NV64 488 aa21.17■□□□□ 0.98
VCX3A-203ENST00000612369 SLC27A2O14975 620 aa21.16■□□□□ 0.98
VCX3A-203ENST00000612369 MCM5P33992 734 aa21.16■□□□□ 0.98
VCX3A-203ENST00000612369 GHRHRQ02643 423 aa21.16■□□□□ 0.98
VCX3A-203ENST00000612369 TBC1D5Q92609 795 aa21.16■□□□□ 0.98
VCX3A-203ENST00000612369 TMEM87BQ96K49 555 aa21.16■□□□□ 0.98
VCX3A-203ENST00000612369 SENP2Q9HC62 589 aa21.16■□□□□ 0.98
VCX3A-203ENST00000612369 TLR3O15455 904 aaKnown RBP21.15■□□□□ 0.98
VCX3A-203ENST00000612369 RAG1P15918 1043 aa21.15■□□□□ 0.98
VCX3A-203ENST00000612369 CPT1AP50416 773 aa21.15■□□□□ 0.98
VCX3A-203ENST00000612369 PPP2R5BQ15173 497 aa21.15■□□□□ 0.98
VCX3A-203ENST00000612369 RNF20Q5VTR2 975 aa21.15■□□□□ 0.98
VCX3A-203ENST00000612369 CREB3L3Q68CJ9 461 aa21.15■□□□□ 0.98
VCX3A-203ENST00000612369 CXCL17Q6UXB2 119 aa21.15■□□□□ 0.98
VCX3A-203ENST00000612369 LRCH3Q96II8 777 aa21.15■□□□□ 0.98
VCX3A-203ENST00000612369 CCDC136Q96JN2 1154 aa21.15■□□□□ 0.98
VCX3A-203ENST00000612369 TAAR1Q96RJ0 339 aa21.15■□□□□ 0.98
VCX3A-203ENST00000612369 RMDN3Q96TC7 470 aa21.15■□□□□ 0.98
VCX3A-203ENST00000612369 PCDHA1Q9Y5I3 950 aa21.15■□□□□ 0.98
VCX3A-203ENST00000612369 PRC1O43663 620 aa21.14■□□□□ 0.97
VCX3A-203ENST00000612369 DDAH1O94760 285 aa21.14■□□□□ 0.97
VCX3A-203ENST00000612369 HSD17B4P51659 736 aa21.14■□□□□ 0.97
VCX3A-203ENST00000612369 BRDTQ58F21 947 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms