RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ESR2Q92731 530 aa20.89■□□□□ 0.93
SSBP1-215ENST00000612337 SEZ6LQ9BYH1 1024 aa20.89■□□□□ 0.93
SSBP1-215ENST00000612337 NEDD4P46934 1319 aa20.88■□□□□ 0.93
SSBP1-215ENST00000612337 WDR19Q8NEZ3 1342 aa20.88■□□□□ 0.93
SSBP1-215ENST00000612337 PTPDC1A2A3K4 754 aa20.88■□□□□ 0.93
SSBP1-215ENST00000612337 ZNF213O14771 459 aa20.88■□□□□ 0.93
SSBP1-215ENST00000612337 IGHDP01880 384 aa20.88■□□□□ 0.93
SSBP1-215ENST00000612337 ITGA7Q13683 1181 aa20.88■□□□□ 0.93
SSBP1-215ENST00000612337 DUSP28Q4G0W2 176 aa20.88■□□□□ 0.93
SSBP1-215ENST00000612337 TMEM63BQ5T3F8 832 aa20.88■□□□□ 0.93
SSBP1-215ENST00000612337 C16orf59Q7L2K0 433 aa20.88■□□□□ 0.93
SSBP1-215ENST00000612337 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.88■□□□□ 0.93
SSBP1-215ENST00000612337 PPP1R12CQ9BZL4 782 aa20.88■□□□□ 0.93
SSBP1-215ENST00000612337 GRIN2DO15399 1336 aa20.87■□□□□ 0.93
SSBP1-215ENST00000612337 CSF2RAP15509 400 aa20.87■□□□□ 0.93
SSBP1-215ENST00000612337 TMEM240Q5SV17 173 aa20.87■□□□□ 0.93
SSBP1-215ENST00000612337 SLC30A10Q6XR72 485 aa20.87■□□□□ 0.93
SSBP1-215ENST00000612337 RNF207Q6ZRF8 634 aa20.87■□□□□ 0.93
SSBP1-215ENST00000612337 DGKHQ86XP1 1220 aa20.87■□□□□ 0.93
SSBP1-215ENST00000612337 MYLIPQ8WY64 445 aa20.87■□□□□ 0.93
SSBP1-215ENST00000612337 YTHDC1Q96MU7 727 aaKnown RBP20.87■□□□□ 0.93
SSBP1-215ENST00000612337 LAMA4Q16363 1823 aa20.87■□□□□ 0.93
SSBP1-215ENST00000612337 DNAJB2P25686 324 aa20.86■□□□□ 0.93
SSBP1-215ENST00000612337 CALML3P27482 149 aa20.86■□□□□ 0.93
SSBP1-215ENST00000612337 GPATCH4Q5T3I0 446 aaKnown RBP20.86■□□□□ 0.93
SSBP1-215ENST00000612337 RASIP1Q5U651 963 aa20.86■□□□□ 0.93
SSBP1-215ENST00000612337 PSRC1Q6PGN9 363 aaPredicted RBP20.86■□□□□ 0.93
SSBP1-215ENST00000612337 CWC27Q6UX04 472 aaKnown RBP20.86■□□□□ 0.93
SSBP1-215ENST00000612337 MAFAQ8NHW3 353 aaPredicted RBP20.86■□□□□ 0.93
SSBP1-215ENST00000612337 WDR11Q9BZH6 1224 aa20.86■□□□□ 0.93
SSBP1-215ENST00000612337 DIAPH3Q9NSV4 1193 aa20.86■□□□□ 0.93
SSBP1-215ENST00000612337 SPTBN5Q9NRC6 3674 aaKnown RBP20.85■□□□□ 0.93
SSBP1-215ENST00000612337 CHD9Q3L8U1 2897 aa20.85■□□□□ 0.93
SSBP1-215ENST00000612337 RBM47A0AV96 593 aaKnown RBP20.85■□□□□ 0.93
SSBP1-215ENST00000612337 HIP1O00291 1037 aa20.85■□□□□ 0.93
SSBP1-215ENST00000612337 CYP2C18P33260 490 aa20.85■□□□□ 0.93
SSBP1-215ENST00000612337 RPS6P62753 249 aaKnown RBP20.85■□□□□ 0.93
SSBP1-215ENST00000612337 CCDC178Q5BJE1 867 aa20.85■□□□□ 0.93
SSBP1-215ENST00000612337 ZKSCAN3Q9BRR0 538 aa20.85■□□□□ 0.93
SSBP1-215ENST00000612337 ZNF365Q70YC5 407 aa20.84■□□□□ 0.93
SSBP1-215ENST00000612337 IQCA1Q86XH1 822 aa20.84■□□□□ 0.93
SSBP1-215ENST00000612337 DNERQ8NFT8 737 aa20.84■□□□□ 0.93
SSBP1-215ENST00000612337 EXOC6Q8TAG9 804 aa20.84■□□□□ 0.93
SSBP1-215ENST00000612337 MPHOSPH6Q99547 160 aaKnown RBP20.84■□□□□ 0.93
SSBP1-215ENST00000612337 HIPK3Q9H422 1215 aa20.84■□□□□ 0.93
SSBP1-215ENST00000612337 IL23AQ9NPF7 189 aa20.84■□□□□ 0.93
SSBP1-215ENST00000612337 KDM4AO75164 1064 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 GOLGA8HP0CJ92 632 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 ACRP10323 421 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 FOSL2P15408 326 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 EDNRBP24530 442 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 CPT1AP50416 773 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 PSMC6P62333 389 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 PDE4DQ08499 809 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 PNMA1Q8ND90 353 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 RGS22Q8NE09 1264 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 ANKS1AQ92625 1134 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 TIFAQ96CG3 184 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 DSCC1Q9BVC3 393 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 TRPV6Q9H1D0 765 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 POLR3EQ9NVU0 708 aa20.83■□□□□ 0.93
SSBP1-215ENST00000612337 NKRFO15226 690 aaKnown RBP eCLIP20.82■□□□□ 0.92
SSBP1-215ENST00000612337 B4GALT4O60513 344 aa20.82■□□□□ 0.92
SSBP1-215ENST00000612337 GRIN2CQ14957 1233 aa20.82■□□□□ 0.92
SSBP1-215ENST00000612337 NOC4LQ9BVI4 516 aaKnown RBP20.82■□□□□ 0.92
SSBP1-215ENST00000612337 KAT14Q9H8E8 782 aa20.82■□□□□ 0.92
SSBP1-215ENST00000612337 UMODL1Q5DID0 1318 aa20.81■□□□□ 0.92
SSBP1-215ENST00000612337 B4E1Z4 1266 aa20.81■□□□□ 0.92
SSBP1-215ENST00000612337 PURAQ00577 322 aaKnown RBP20.81■□□□□ 0.92
SSBP1-215ENST00000612337 PPP2R5BQ15173 497 aa20.81■□□□□ 0.92
SSBP1-215ENST00000612337 USH1GQ495M9 461 aa20.81■□□□□ 0.92
SSBP1-215ENST00000612337 OR6J1Q8NGC5 347 aa20.81■□□□□ 0.92
SSBP1-215ENST00000612337 SCFD2Q8WU76 684 aa20.81■□□□□ 0.92
SSBP1-215ENST00000612337 HERVK_113Q902F9 699 aa20.81■□□□□ 0.92
SSBP1-215ENST00000612337 ZSCAN10Q96SZ4 725 aaPredicted RBP20.81■□□□□ 0.92
SSBP1-215ENST00000612337 PBX4Q9BYU1 374 aa20.81■□□□□ 0.92
SSBP1-215ENST00000612337 UBA5Q9GZZ9 404 aa20.81■□□□□ 0.92
SSBP1-215ENST00000612337 MAF1Q9H063 256 aa20.81■□□□□ 0.92
SSBP1-215ENST00000612337 ALDH8A1Q9H2A2 487 aaPredicted RBP20.81■□□□□ 0.92
SSBP1-215ENST00000612337 CPVLQ9H3G5 476 aa20.81■□□□□ 0.92
SSBP1-215ENST00000612337 ZNF576Q9H609 170 aa20.81■□□□□ 0.92
SSBP1-215ENST00000612337 GRXCR1A8MXD5 290 aa20.8■□□□□ 0.92
SSBP1-215ENST00000612337 B4DLN1 442 aa20.8■□□□□ 0.92
SSBP1-215ENST00000612337 MRPL12P52815 198 aaKnown RBP20.8■□□□□ 0.92
SSBP1-215ENST00000612337 CDC37Q16543 378 aaPredicted RBP20.8■□□□□ 0.92
SSBP1-215ENST00000612337 IMMTQ16891 758 aaKnown RBP20.8■□□□□ 0.92
SSBP1-215ENST00000612337 BRDTQ58F21 947 aaPredicted RBP20.8■□□□□ 0.92
SSBP1-215ENST00000612337 ENAHQ8N8S7 591 aaPredicted RBP20.8■□□□□ 0.92
SSBP1-215ENST00000612337 COL25A1Q9BXS0 654 aaPredicted RBP20.8■□□□□ 0.92
SSBP1-215ENST00000612337 MTIF3Q9H2K0 278 aaKnown RBP20.8■□□□□ 0.92
SSBP1-215ENST00000612337 CTNNA3Q9UI47 895 aa20.8■□□□□ 0.92
SSBP1-215ENST00000612337 RAD50Q92878 1312 aa20.79■□□□□ 0.92
SSBP1-215ENST00000612337 CHD7Q9P2D1 2997 aa20.79■□□□□ 0.92
SSBP1-215ENST00000612337 FGBP02675 491 aa20.79■□□□□ 0.92
SSBP1-215ENST00000612337 MYL3P08590 195 aa20.79■□□□□ 0.92
SSBP1-215ENST00000612337 PBX2P40425 430 aa20.79■□□□□ 0.92
SSBP1-215ENST00000612337 CCL23P55773 120 aa20.79■□□□□ 0.92
SSBP1-215ENST00000612337 ASPRV1Q53RT3 343 aa20.79■□□□□ 0.92
SSBP1-215ENST00000612337 MTG1Q9BT17 334 aaPredicted RBP20.79■□□□□ 0.92
SSBP1-215ENST00000612337 KRT23Q9C075 422 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms