RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 PTCHD1Q96NR3 888 aa6.33□□□□□ -1.4
TARDBP-212ENST00000611008 NUDT5Q9UKK9 219 aa6.33□□□□□ -1.4
TARDBP-212ENST00000611008 INVSQ9Y283 1065 aa6.33□□□□□ -1.4
TARDBP-212ENST00000611008 TSC22D4Q9Y3Q8 395 aa6.33□□□□□ -1.4
TARDBP-212ENST00000611008 SORBS3O60504 671 aa6.32□□□□□ -1.4
TARDBP-212ENST00000611008 GREM1O60565 184 aa6.32□□□□□ -1.4
TARDBP-212ENST00000611008 EIF4A3P38919 411 aaKnown RBP6.32□□□□□ -1.4
TARDBP-212ENST00000611008 CLCQ05315 142 aa6.32□□□□□ -1.4
TARDBP-212ENST00000611008 TRIM26Q12899 539 aaPredicted RBP6.32□□□□□ -1.4
TARDBP-212ENST00000611008 SLC9A5Q14940 896 aa6.32□□□□□ -1.4
TARDBP-212ENST00000611008 CRB2Q5IJ48 1285 aa6.32□□□□□ -1.4
TARDBP-212ENST00000611008 PEX11GQ96HA9 241 aa6.32□□□□□ -1.4
TARDBP-212ENST00000611008 KCNQ5Q9NR82 932 aa6.32□□□□□ -1.4
TARDBP-212ENST00000611008 SUCOQ9UBS9 1254 aaKnown RBP6.32□□□□□ -1.4
TARDBP-212ENST00000611008 SHOXO15266 292 aa6.31□□□□□ -1.4
TARDBP-212ENST00000611008 MCM4P33991 863 aa6.31□□□□□ -1.4
TARDBP-212ENST00000611008 SEZ6Q53EL9 994 aa6.31□□□□□ -1.4
TARDBP-212ENST00000611008 REXO1Q8N1G1 1221 aaKnown RBP6.31□□□□□ -1.4
TARDBP-212ENST00000611008 DDX11Q96FC9 970 aa6.31□□□□□ -1.4
TARDBP-212ENST00000611008 FCRL3Q96P31 734 aaPredicted RBP6.31□□□□□ -1.4
TARDBP-212ENST00000611008 SLC9A7Q96T83 725 aa6.31□□□□□ -1.4
TARDBP-212ENST00000611008 TRAIPQ9BWF2 469 aa6.31□□□□□ -1.4
TARDBP-212ENST00000611008 SSBP3Q9BWW4 388 aaPredicted RBP6.31□□□□□ -1.4
TARDBP-212ENST00000611008 MRS2Q9HD23 443 aa6.31□□□□□ -1.4
TARDBP-212ENST00000611008 MROH6A6NGR9 719 aa6.3□□□□□ -1.4
TARDBP-212ENST00000611008 C9IYK1 514 aa6.3□□□□□ -1.4
TARDBP-212ENST00000611008 CRKP46108 304 aa6.3□□□□□ -1.4
TARDBP-212ENST00000611008 LIMS2Q7Z4I7 341 aa6.3□□□□□ -1.4
TARDBP-212ENST00000611008 LINC00482Q8N8I6 264 aa6.3□□□□□ -1.4
TARDBP-212ENST00000611008 BRF1Q92994 677 aa6.3□□□□□ -1.4
TARDBP-212ENST00000611008 CDK5RAP1Q96SZ6 601 aaKnown RBP6.3□□□□□ -1.4
TARDBP-212ENST00000611008 VTI1BQ9UEU0 232 aa6.3□□□□□ -1.4
TARDBP-212ENST00000611008 FAM86C2PA6NEL3 165 aa6.29□□□□□ -1.4
TARDBP-212ENST00000611008 MEIS3P2A8K0S8 358 aa6.29□□□□□ -1.4
TARDBP-212ENST00000611008 ZBTB7AO95365 584 aa6.29□□□□□ -1.4
TARDBP-212ENST00000611008 CYP2C8P10632 490 aa6.29□□□□□ -1.4
TARDBP-212ENST00000611008 RPL13P26373 211 aaKnown RBP6.29□□□□□ -1.4
TARDBP-212ENST00000611008 ZNF165P49910 485 aa6.29□□□□□ -1.4
TARDBP-212ENST00000611008 FAM26FQ5R3K3 315 aa6.29□□□□□ -1.4
TARDBP-212ENST00000611008 LZTR1Q8N653 840 aa6.29□□□□□ -1.4
TARDBP-212ENST00000611008 NETO2Q8NC67 525 aa6.29□□□□□ -1.4
TARDBP-212ENST00000611008 ZNF296Q8WUU4 475 aaPredicted RBP6.29□□□□□ -1.4
TARDBP-212ENST00000611008 VPS11Q9H270 941 aa6.29□□□□□ -1.4
TARDBP-212ENST00000611008 COPRSQ9NQ92 184 aa6.29□□□□□ -1.4
TARDBP-212ENST00000611008 SF3B6Q9Y3B4 125 aaKnown RBP6.29□□□□□ -1.4
TARDBP-212ENST00000611008 CD3EP07766 207 aa6.28□□□□□ -1.4
TARDBP-212ENST00000611008 IFNGR1P15260 489 aa6.28□□□□□ -1.4
TARDBP-212ENST00000611008 ZNF445P59923 1031 aa6.28□□□□□ -1.4
TARDBP-212ENST00000611008 POU4F1Q01851 419 aa6.28□□□□□ -1.4
TARDBP-212ENST00000611008 CDSNQ15517 529 aa6.28□□□□□ -1.4
TARDBP-212ENST00000611008 ERMP1Q7Z2K6 904 aa6.28□□□□□ -1.4
TARDBP-212ENST00000611008 FIBCD1Q8N539 461 aa6.28□□□□□ -1.4
TARDBP-212ENST00000611008 SMARCC1Q92922 1105 aaPredicted RBP6.28□□□□□ -1.4
TARDBP-212ENST00000611008 ZNF747Q9BV97 191 aa6.28□□□□□ -1.4
TARDBP-212ENST00000611008 FHOD1Q9Y613 1164 aa6.28□□□□□ -1.4
TARDBP-212ENST00000611008 THBS2P35442 1172 aa6.27□□□□□ -1.41
TARDBP-212ENST00000611008 APOBRQ0VD83 1088 aa6.27□□□□□ -1.41
TARDBP-212ENST00000611008 ANKRD39Q53RE8 183 aa6.27□□□□□ -1.41
TARDBP-212ENST00000611008 TDRD10Q5VZ19 366 aaKnown RBP6.27□□□□□ -1.41
TARDBP-212ENST00000611008 DCAF15Q66K64 600 aa6.27□□□□□ -1.41
TARDBP-212ENST00000611008 MCTP2Q6DN12 878 aa6.27□□□□□ -1.41
TARDBP-212ENST00000611008 GORASP1Q9BQQ3 440 aa6.27□□□□□ -1.41
TARDBP-212ENST00000611008 PCED1AQ9H1Q7 454 aa6.27□□□□□ -1.41
TARDBP-212ENST00000611008 PCDH18Q9HCL0 1135 aa6.27□□□□□ -1.41
TARDBP-212ENST00000611008 GP6Q9HCN6 339 aa6.27□□□□□ -1.41
TARDBP-212ENST00000611008 UBP1Q9NZI7 540 aa6.27□□□□□ -1.41
TARDBP-212ENST00000611008 RWDD3Q9Y3V2 267 aa6.27□□□□□ -1.41
TARDBP-212ENST00000611008 ZBTB7CA1YPR0 619 aa6.26□□□□□ -1.41
TARDBP-212ENST00000611008 PMS1P54277 932 aaKnown RBP6.26□□□□□ -1.41
TARDBP-212ENST00000611008 SURF1Q15526 300 aa6.26□□□□□ -1.41
TARDBP-212ENST00000611008 INTS3Q68E01 1043 aaKnown RBP6.26□□□□□ -1.41
TARDBP-212ENST00000611008 C11orf84Q9BUA3 381 aaPredicted RBP6.26□□□□□ -1.41
TARDBP-212ENST00000611008 KLC2Q9H0B6 622 aa6.26□□□□□ -1.41
TARDBP-212ENST00000611008 LAMTOR5O43504 91 aa6.25□□□□□ -1.41
TARDBP-212ENST00000611008 AMHP03971 560 aa6.25□□□□□ -1.41
TARDBP-212ENST00000611008 C8BP07358 591 aa6.25□□□□□ -1.41
TARDBP-212ENST00000611008 ITGAEP38570 1179 aa6.25□□□□□ -1.41
TARDBP-212ENST00000611008 KYQ8NBH2 561 aa6.25□□□□□ -1.41
TARDBP-212ENST00000611008 NOL6Q9H6R4 1146 aaKnown RBP6.25□□□□□ -1.41
TARDBP-212ENST00000611008 HS3ST3A1Q9Y663 406 aa6.25□□□□□ -1.41
TARDBP-212ENST00000611008 ITGA4P13612 1032 aa6.24□□□□□ -1.41
TARDBP-212ENST00000611008 CD247P20963 164 aa6.24□□□□□ -1.41
TARDBP-212ENST00000611008 ICAM4Q14773 271 aa6.24□□□□□ -1.41
TARDBP-212ENST00000611008 AXDND1Q5T1B0 1012 aaPredicted RBP6.24□□□□□ -1.41
TARDBP-212ENST00000611008 C9orf131Q5VYM1 1079 aa6.24□□□□□ -1.41
TARDBP-212ENST00000611008 EEF1DP3Q658K8 133 aa6.24□□□□□ -1.41
TARDBP-212ENST00000611008 RCSD1Q6JBY9 416 aa6.24□□□□□ -1.41
TARDBP-212ENST00000611008 TXNDC5Q8NBS9 432 aaKnown RBP6.24□□□□□ -1.41
TARDBP-212ENST00000611008 USP33Q8TEY7 942 aa6.24□□□□□ -1.41
TARDBP-212ENST00000611008 LCORQ96JN0 433 aaPredicted RBP6.24□□□□□ -1.41
TARDBP-212ENST00000611008 ZDHHC15Q96MV8 337 aa6.24□□□□□ -1.41
TARDBP-212ENST00000611008 FBLN5Q9UBX5 448 aa6.24□□□□□ -1.41
TARDBP-212ENST00000611008 NPEPPSL1A6NEC2 478 aa6.23□□□□□ -1.41
TARDBP-212ENST00000611008 ACRP10323 421 aa6.23□□□□□ -1.41
TARDBP-212ENST00000611008 WWC2Q6AWC2 1192 aa6.23□□□□□ -1.41
TARDBP-212ENST00000611008 PLEKHH3Q7Z736 793 aa6.23□□□□□ -1.41
TARDBP-212ENST00000611008 PALM2Q8IXS6 379 aa6.23□□□□□ -1.41
TARDBP-212ENST00000611008 TTLL6Q8N841 843 aa6.23□□□□□ -1.41
TARDBP-212ENST00000611008 NKD1Q969G9 470 aa6.23□□□□□ -1.41
TARDBP-212ENST00000611008 DEF6Q9H4E7 631 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms