RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 FAM169AQ9Y6X4 670 aa24.87■■□□□ 1.57
SHANK2-220ENST00000608988 GRIN2DO15399 1336 aa24.87■■□□□ 1.57
SHANK2-220ENST00000608988 ZEB2O60315 1214 aa24.87■■□□□ 1.57
SHANK2-220ENST00000608988 EMC10Q5UCC4 262 aa24.87■■□□□ 1.57
SHANK2-220ENST00000608988 CNNM4Q6P4Q7 775 aa24.87■■□□□ 1.57
SHANK2-220ENST00000608988 CCDC84Q86UT8 332 aaPredicted RBP24.87■■□□□ 1.57
SHANK2-220ENST00000608988 GSPT2Q8IYD1 628 aaKnown RBP24.87■■□□□ 1.57
SHANK2-220ENST00000608988 C1orf131Q8NDD1 294 aaKnown RBP24.87■■□□□ 1.57
SHANK2-220ENST00000608988 LRRC1Q9BTT6 524 aa24.87■■□□□ 1.57
SHANK2-220ENST00000608988 CRNKL1Q9BZJ0 848 aaKnown RBP24.87■■□□□ 1.57
SHANK2-220ENST00000608988 SCN7AQ01118 1682 aa24.87■■□□□ 1.57
SHANK2-220ENST00000608988 CYP2D7A0A087X1C5 515 aa24.86■■□□□ 1.57
SHANK2-220ENST00000608988 USP17L12C9JPN9 530 aa24.86■■□□□ 1.57
SHANK2-220ENST00000608988 USP17L21D6R901 530 aa24.86■■□□□ 1.57
SHANK2-220ENST00000608988 DYNLL1P63167 89 aaKnown RBP24.86■■□□□ 1.57
SHANK2-220ENST00000608988 GNGT1P63211 74 aa24.86■■□□□ 1.57
SHANK2-220ENST00000608988 CCDC181Q5TID7 509 aa24.86■■□□□ 1.57
SHANK2-220ENST00000608988 ANKRD40Q6AI12 368 aa24.86■■□□□ 1.57
SHANK2-220ENST00000608988 MICALL1Q8N3F8 863 aa24.86■■□□□ 1.57
SHANK2-220ENST00000608988 RNF10Q8N5U6 811 aaKnown RBP24.86■■□□□ 1.57
SHANK2-220ENST00000608988 BCAS4Q8TDM0 211 aa24.86■■□□□ 1.57
SHANK2-220ENST00000608988 CEP89Q96ST8 783 aa24.86■■□□□ 1.57
SHANK2-220ENST00000608988 PLEKHA4Q9H4M7 779 aa24.86■■□□□ 1.57
SHANK2-220ENST00000608988 TCP11L1Q9NUJ3 509 aa24.86■■□□□ 1.57
SHANK2-220ENST00000608988 FAM205AQ6ZU69 1335 aa24.86■■□□□ 1.57
SHANK2-220ENST00000608988 ZNF263O14978 683 aa24.85■■□□□ 1.57
SHANK2-220ENST00000608988 IRX3P78415 501 aaPredicted RBP24.85■■□□□ 1.57
SHANK2-220ENST00000608988 PDE4DQ08499 809 aa24.85■■□□□ 1.57
SHANK2-220ENST00000608988 ORC2Q13416 577 aaPredicted RBP24.85■■□□□ 1.57
SHANK2-220ENST00000608988 FOXR2Q6PJQ5 311 aa24.85■■□□□ 1.57
SHANK2-220ENST00000608988 DGKHQ86XP1 1220 aa24.85■■□□□ 1.57
SHANK2-220ENST00000608988 TRIM9Q9C026 710 aa24.85■■□□□ 1.57
SHANK2-220ENST00000608988 DUSP10Q9Y6W6 482 aa24.85■■□□□ 1.57
SHANK2-220ENST00000608988 CASZ1Q86V15 1759 aa24.85■■□□□ 1.57
SHANK2-220ENST00000608988 KIF11P52732 1056 aa24.85■■□□□ 1.57
SHANK2-220ENST00000608988 CYP27A1Q02318 531 aa24.85■■□□□ 1.57
SHANK2-220ENST00000608988 ZBTB9Q96C00 473 aa24.85■■□□□ 1.57
SHANK2-220ENST00000608988 GDAP1L1Q96MZ0 367 aa24.85■■□□□ 1.57
SHANK2-220ENST00000608988 GEMIN8Q9NWZ8 242 aaKnown RBP24.85■■□□□ 1.57
SHANK2-220ENST00000608988 COL1A1P02452 1464 aaPredicted RBP24.85■■□□□ 1.57
SHANK2-220ENST00000608988 FLT1P17948 1338 aa24.85■■□□□ 1.57
SHANK2-220ENST00000608988 SRRM3A6NNA2 597 aaPredicted RBP24.84■■□□□ 1.57
SHANK2-220ENST00000608988 SMIM22K7EJ46 135 aa24.84■■□□□ 1.57
SHANK2-220ENST00000608988 CAVIN4Q5BKX8 364 aa24.84■■□□□ 1.57
SHANK2-220ENST00000608988 HAUS3Q68CZ6 603 aa24.84■■□□□ 1.57
SHANK2-220ENST00000608988 MCTP2Q6DN12 878 aa24.84■■□□□ 1.57
SHANK2-220ENST00000608988 BRINP3Q76B58 766 aa24.84■■□□□ 1.57
SHANK2-220ENST00000608988 CABP7Q86V35 215 aa24.84■■□□□ 1.57
SHANK2-220ENST00000608988 IFT20Q8IY31 132 aa24.84■■□□□ 1.57
SHANK2-220ENST00000608988 PAGR1Q9BTK6 254 aa24.84■■□□□ 1.57
SHANK2-220ENST00000608988 PCDHA6Q9UN73 950 aa24.84■■□□□ 1.57
SHANK2-220ENST00000608988 SIK3Q9Y2K2 1263 aa24.84■■□□□ 1.57
SHANK2-220ENST00000608988 PCDHA8Q9Y5H6 950 aa24.84■■□□□ 1.57
SHANK2-220ENST00000608988 MYH1P12882 1939 aa24.84■■□□□ 1.57
SHANK2-220ENST00000608988 KIAA1551Q9HCM1 1747 aa24.83■■□□□ 1.57
SHANK2-220ENST00000608988 KLK7P49862 253 aa24.83■■□□□ 1.57
SHANK2-220ENST00000608988 GRM4Q14833 912 aa24.83■■□□□ 1.57
SHANK2-220ENST00000608988 VWA3BQ502W6 1294 aa24.83■■□□□ 1.57
SHANK2-220ENST00000608988 MREGQ8N565 214 aa24.83■■□□□ 1.57
SHANK2-220ENST00000608988 DMGDHQ9UI17 866 aaKnown RBP24.83■■□□□ 1.57
SHANK2-220ENST00000608988 CAPN6Q9Y6Q1 641 aa24.83■■□□□ 1.57
SHANK2-220ENST00000608988 CENPPQ6IPU0 288 aa24.83■■□□□ 1.56
SHANK2-220ENST00000608988 CD302Q8IX05 232 aa24.83■■□□□ 1.56
SHANK2-220ENST00000608988 TMEM60Q9H2L4 133 aa24.83■■□□□ 1.56
SHANK2-220ENST00000608988 ARHGAP20Q9P2F6 1191 aa24.83■■□□□ 1.56
SHANK2-220ENST00000608988 MAST2Q6P0Q8 1798 aa24.82■■□□□ 1.56
SHANK2-220ENST00000608988 SSU72P8A0A1W2PR75 194 aa24.82■■□□□ 1.56
SHANK2-220ENST00000608988 PLCG1P19174 1290 aa24.82■■□□□ 1.56
SHANK2-220ENST00000608988 RCSD1Q6JBY9 416 aa24.82■■□□□ 1.56
SHANK2-220ENST00000608988 C8orf74Q6P047 294 aa24.82■■□□□ 1.56
SHANK2-220ENST00000608988 LZTS2Q9BRK4 669 aa24.82■■□□□ 1.56
SHANK2-220ENST00000608988 INPP5BP32019 993 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 ASIC1P78348 528 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 MAN2A1Q16706 1144 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 MICALCLQ6ZW33 695 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.81■■□□□ 1.563e-6■□□□□ 9.2
SHANK2-220ENST00000608988 NOX5Q96PH1 765 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 NUCKS1Q9H1E3 243 aaKnown RBP24.81■■□□□ 1.56
SHANK2-220ENST00000608988 DCP1AQ9NPI6 582 aaPredicted RBP24.81■■□□□ 1.56
SHANK2-220ENST00000608988 GRID2IPA4D2P6 1211 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 TSPY2A6NKD2 308 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 ADAMTS3O15072 1205 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 AKR1B10O60218 316 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 MOCS3O95396 460 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 NTSR2O95665 410 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 OR52Z1P0C646 297 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 EIF4A3P38919 411 aaKnown RBP24.81■■□□□ 1.56
SHANK2-220ENST00000608988 PAK2Q13177 524 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 CFAP221Q4G0U5 840 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 KDM7AQ6ZMT4 941 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 C2CD5Q86YS7 1000 aa24.81■■□□□ 1.56
SHANK2-220ENST00000608988 LUC7LQ9NQ29 371 aaKnown RBP24.81■■□□□ 1.56
SHANK2-220ENST00000608988 PP2D1A8MPX8 630 aa24.8■■□□□ 1.56
SHANK2-220ENST00000608988 MAGEA1P43355 309 aa24.8■■□□□ 1.56
SHANK2-220ENST00000608988 TYW1BQ6NUM6 668 aa24.8■■□□□ 1.56
SHANK2-220ENST00000608988 KRT25Q7Z3Z0 450 aa24.8■■□□□ 1.56
SHANK2-220ENST00000608988 HDAC7Q8WUI4 952 aa24.8■■□□□ 1.56
SHANK2-220ENST00000608988 RRP36Q96EU6 259 aaKnown RBP24.8■■□□□ 1.56
SHANK2-220ENST00000608988 NDST4Q9H3R1 872 aa24.8■■□□□ 1.56
SHANK2-220ENST00000608988 MLXIPQ9HAP2 919 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms