RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 MCF2L2Q86YR7 1114 aa25.21■■□□□ 1.63
SNRNP70-209ENST00000601065 CAPNS2Q96L46 248 aa25.21■■□□□ 1.63
SNRNP70-209ENST00000601065 GCOM1H8Y6P7 765 aaPredicted RBP25.21■■□□□ 1.63
SNRNP70-209ENST00000601065 FIBPO43427 364 aa25.21■■□□□ 1.63
SNRNP70-209ENST00000601065 POLR2MP0CAP2 368 aa25.21■■□□□ 1.63
SNRNP70-209ENST00000601065 HOXA13P31271 388 aaPredicted RBP25.21■■□□□ 1.63
SNRNP70-209ENST00000601065 TM4SF4P48230 202 aa25.21■■□□□ 1.63
SNRNP70-209ENST00000601065 GCLCP48506 637 aaPredicted RBP25.21■■□□□ 1.63
SNRNP70-209ENST00000601065 TOB1P50616 345 aaPredicted RBP25.21■■□□□ 1.63
SNRNP70-209ENST00000601065 GHRHRQ02643 423 aa25.21■■□□□ 1.63
SNRNP70-209ENST00000601065 RILPL1Q5EBL4 403 aa25.21■■□□□ 1.63
SNRNP70-209ENST00000601065 PRPF40AO75400 957 aaKnown RBP25.2■■□□□ 1.62
SNRNP70-209ENST00000601065 HSD17B4P51659 736 aa25.2■■□□□ 1.62
SNRNP70-209ENST00000601065 ERVK-9P63128 1117 aa25.2■■□□□ 1.62
SNRNP70-209ENST00000601065 ERVK-24P63145 666 aa25.2■■□□□ 1.62
SNRNP70-209ENST00000601065 AP3B2Q13367 1082 aa25.2■■□□□ 1.62
SNRNP70-209ENST00000601065 Q3C1V9 767 aa25.2■■□□□ 1.62
SNRNP70-209ENST00000601065 ATL3Q6DD88 541 aa25.2■■□□□ 1.62
SNRNP70-209ENST00000601065 PGBD1Q96JS3 809 aa25.2■■□□□ 1.62
SNRNP70-209ENST00000601065 ZNF396Q96N95 335 aaPredicted RBP25.2■■□□□ 1.62
SNRNP70-209ENST00000601065 MOV10L1Q9BXT6 1211 aaKnown RBP25.2■■□□□ 1.62
SNRNP70-209ENST00000601065 NONOQ15233 471 aaKnown RBP eCLIP25.19■■□□□ 1.625e-8■■□□□ 13
SNRNP70-209ENST00000601065 CHST13Q8NET6 341 aa25.19■■□□□ 1.62
SNRNP70-209ENST00000601065 USP28Q96RU2 1077 aa25.19■■□□□ 1.62
SNRNP70-209ENST00000601065 FTOQ9C0B1 505 aaKnown RBP eCLIP25.19■■□□□ 1.629e-16■□□□□ 8.5
SNRNP70-209ENST00000601065 ACAD9Q9H845 621 aa25.19■■□□□ 1.62
SNRNP70-209ENST00000601065 INF2Q27J81 1249 aa25.18■■□□□ 1.62
SNRNP70-209ENST00000601065 MCTP2Q6DN12 878 aa25.18■■□□□ 1.62
SNRNP70-209ENST00000601065 SAMD3Q8N6K7 520 aa25.18■■□□□ 1.62
SNRNP70-209ENST00000601065 LMBRD1Q9NUN5 540 aa25.18■■□□□ 1.62
SNRNP70-209ENST00000601065 MAP3K20Q9NYL2 800 aaKnown RBP25.18■■□□□ 1.62
SNRNP70-209ENST00000601065 CFAP45Q9UL16 551 aa25.18■■□□□ 1.62
SNRNP70-209ENST00000601065 NOL7Q9UMY1 257 aaKnown RBP25.18■■□□□ 1.62
SNRNP70-209ENST00000601065 SLC25A27O95847 323 aa25.18■■□□□ 1.62
SNRNP70-209ENST00000601065 FOSP01100 380 aaPredicted RBP25.18■■□□□ 1.62
SNRNP70-209ENST00000601065 TRAPPC10P48553 1259 aa25.18■■□□□ 1.62
SNRNP70-209ENST00000601065 ANKRD13CQ8N6S4 541 aa25.18■■□□□ 1.62
SNRNP70-209ENST00000601065 SPDYE3A6NKU9 549 aa25.17■■□□□ 1.62
SNRNP70-209ENST00000601065 AOC2O75106 756 aa25.17■■□□□ 1.62
SNRNP70-209ENST00000601065 TAF1CQ15572 869 aaPredicted RBP25.17■■□□□ 1.62
SNRNP70-209ENST00000601065 GPRC5AQ8NFJ5 357 aa25.17■■□□□ 1.62
SNRNP70-209ENST00000601065 TBCKQ8TEA7 893 aa25.17■■□□□ 1.62
SNRNP70-209ENST00000601065 ANO3Q9BYT9 981 aa25.17■■□□□ 1.62
SNRNP70-209ENST00000601065 MORF4L1Q9UBU8 362 aa25.17■■□□□ 1.62
SNRNP70-209ENST00000601065 RPS6P62753 249 aaKnown RBP25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 CEBPZQ03701 1054 aaKnown RBP25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 NSMFQ6X4W1 530 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 RNF207Q6ZRF8 634 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 NCAPG2Q86XI2 1143 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 POLR3EQ9NVU0 708 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 FBXO40Q9UH90 709 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 CLIC4Q9Y696 253 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 ADGRA2Q96PE1 1338 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 WNT7AO00755 349 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 ERCC3P19447 782 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 ATP2B1P20020 1258 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 COPB2P35606 906 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 FCHSD1Q86WN1 690 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 SCAND2PQ9GZW5 306 aaPredicted RBP25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 MAF1Q9H063 256 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 RTEL1Q9NZ71 1219 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 PCDHB6Q9Y5E3 794 aa25.16■■□□□ 1.62
SNRNP70-209ENST00000601065 MYH7BA7E2Y1 1941 aa25.15■■□□□ 1.62
SNRNP70-209ENST00000601065 PTMSP20962 102 aa25.15■■□□□ 1.62
SNRNP70-209ENST00000601065 HTRA3P83110 453 aa25.15■■□□□ 1.62
SNRNP70-209ENST00000601065 ANO1Q5XXA6 986 aa25.15■■□□□ 1.62
SNRNP70-209ENST00000601065 SLC30A10Q6XR72 485 aa25.15■■□□□ 1.62
SNRNP70-209ENST00000601065 TMEM87AQ8NBN3 555 aa25.15■■□□□ 1.62
SNRNP70-209ENST00000601065 A1CFQ9NQ94 594 aaKnown RBP25.15■■□□□ 1.62
SNRNP70-209ENST00000601065 COL20A1Q9P218 1284 aa25.15■■□□□ 1.62
SNRNP70-209ENST00000601065 NASPP49321 788 aaPredicted RBP25.14■■□□□ 1.62
SNRNP70-209ENST00000601065 SF3A1Q15459 793 aaKnown RBP25.14■■□□□ 1.62
SNRNP70-209ENST00000601065 CSPP1Q1MSJ5 1256 aa25.14■■□□□ 1.62
SNRNP70-209ENST00000601065 FAM110CQ1W6H9 321 aa25.14■■□□□ 1.62
SNRNP70-209ENST00000601065 TTC38Q5R3I4 469 aa25.14■■□□□ 1.62
SNRNP70-209ENST00000601065 NEK8Q86SG6 692 aa25.14■■□□□ 1.62
SNRNP70-209ENST00000601065 SHCBP1Q8NEM2 672 aa25.14■■□□□ 1.62
SNRNP70-209ENST00000601065 SYTL5Q8TDW5 730 aaPredicted RBP25.14■■□□□ 1.62
SNRNP70-209ENST00000601065 SPATA32Q96LK8 384 aa25.14■■□□□ 1.62
SNRNP70-209ENST00000601065 R3HDMLQ9H3Y0 253 aa25.14■■□□□ 1.62
SNRNP70-209ENST00000601065 PCNTO95613 3336 aa25.14■■□□□ 1.61
SNRNP70-209ENST00000601065 CCNA1P78396 465 aa25.13■■□□□ 1.61
SNRNP70-209ENST00000601065 BAATQ14032 418 aaPredicted RBP25.13■■□□□ 1.61
SNRNP70-209ENST00000601065 REM2Q8IYK8 340 aaPredicted RBP25.13■■□□□ 1.61
SNRNP70-209ENST00000601065 CYP39A1Q9NYL5 469 aa25.13■■□□□ 1.61
SNRNP70-209ENST00000601065 EDIL3O43854 480 aa25.13■■□□□ 1.61
SNRNP70-209ENST00000601065 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.13■■□□□ 1.612e-7■□□□□ 9.6
SNRNP70-209ENST00000601065 LEO1Q8WVC0 666 aaPredicted RBP25.13■■□□□ 1.61
SNRNP70-209ENST00000601065 CRYGNQ8WXF5 182 aa25.13■■□□□ 1.61
SNRNP70-209ENST00000601065 PORCNQ9H237 461 aa25.13■■□□□ 1.61
SNRNP70-209ENST00000601065 MROH8Q9H579 483 aa25.13■■□□□ 1.61
SNRNP70-209ENST00000601065 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.13■■□□□ 1.61
SNRNP70-209ENST00000601065 TLR2O60603 784 aa25.12■■□□□ 1.61
SNRNP70-209ENST00000601065 SREBF1P36956 1147 aa25.12■■□□□ 1.61
SNRNP70-209ENST00000601065 LETM2Q2VYF4 491 aa25.12■■□□□ 1.61
SNRNP70-209ENST00000601065 LINC00301Q8NCQ3 95 aa25.12■■□□□ 1.61
SNRNP70-209ENST00000601065 ZFYVE28Q9HCC9 887 aa25.12■■□□□ 1.61
SNRNP70-209ENST00000601065 YEATS4O95619 227 aa25.11■■□□□ 1.61
SNRNP70-209ENST00000601065 BCRP11274 1271 aa25.11■■□□□ 1.61
SNRNP70-209ENST00000601065 VEGFBP49765 207 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms