RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 TMEM87BQ96K49 555 aa25.98■■□□□ 1.75
GTF2F1-204ENST00000594965 TSEN34Q9BSV6 310 aaKnown RBP25.98■■□□□ 1.75
GTF2F1-204ENST00000594965 KIAA1217Q5T5P2 1943 aa25.98■■□□□ 1.75
GTF2F1-204ENST00000594965 A0A1W2PQ45 241 aaPredicted RBP25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 A0A1W2PQY0 241 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 ZBTB5O15062 677 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 SMPD1P17405 629 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 PTGS1P23219 599 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 CST5P28325 142 aaPredicted RBP25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 NKX3-2P78367 333 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 TNFAIP2Q03169 654 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 RASEFQ8IZ41 740 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 ZNF654Q8IZM8 581 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 MYL10Q9BUA6 226 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 AMNQ9BXJ7 453 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 MAF1Q9H063 256 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 VTA1Q9NP79 307 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 COL20A1Q9P218 1284 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 DNAH12Q6ZR08 3092 aa25.97■■□□□ 1.75
GTF2F1-204ENST00000594965 OPLAHO14841 1288 aa25.96■■□□□ 1.75
GTF2F1-204ENST00000594965 EDNRBP24530 442 aa25.96■■□□□ 1.75
GTF2F1-204ENST00000594965 KCNA10Q16322 511 aa25.96■■□□□ 1.75
GTF2F1-204ENST00000594965 TSGA10IPQ3SY00 556 aa25.96■■□□□ 1.75
GTF2F1-204ENST00000594965 C1orf53Q5VUE5 145 aa25.96■■□□□ 1.75
GTF2F1-204ENST00000594965 DNERQ8NFT8 737 aa25.96■■□□□ 1.75
GTF2F1-204ENST00000594965 NUP133Q8WUM0 1156 aa25.96■■□□□ 1.75
GTF2F1-204ENST00000594965 PIGSQ96S52 555 aa25.96■■□□□ 1.75
GTF2F1-204ENST00000594965 MAP3K14Q99558 947 aa25.96■■□□□ 1.75
GTF2F1-204ENST00000594965 GDF15Q99988 308 aa25.96■■□□□ 1.75
GTF2F1-204ENST00000594965 LRRC2Q9BYS8 371 aa25.96■■□□□ 1.75
GTF2F1-204ENST00000594965 MRPL11Q9Y3B7 192 aaKnown RBP25.96■■□□□ 1.75
GTF2F1-204ENST00000594965 C6orf222P0C671 652 aaPredicted RBP25.95■■□□□ 1.74
GTF2F1-204ENST00000594965 ACLYP53396 1101 aa25.95■■□□□ 1.74
GTF2F1-204ENST00000594965 TRIM60Q495X7 471 aa25.95■■□□□ 1.74
GTF2F1-204ENST00000594965 RNF20Q5VTR2 975 aa25.95■■□□□ 1.74
GTF2F1-204ENST00000594965 SYTL5Q8TDW5 730 aaPredicted RBP25.95■■□□□ 1.74
GTF2F1-204ENST00000594965 PPP4R2Q9NY27 417 aa25.95■■□□□ 1.74
GTF2F1-204ENST00000594965 ATP11BQ9Y2G3 1177 aa25.95■■□□□ 1.74
GTF2F1-204ENST00000594965 DDAH1O94760 285 aa25.94■■□□□ 1.74
GTF2F1-204ENST00000594965 LIFRP42702 1097 aa25.94■■□□□ 1.74
GTF2F1-204ENST00000594965 ADCK5Q3MIX3 580 aa25.94■■□□□ 1.74
GTF2F1-204ENST00000594965 ERICH6BQ5W0A0 696 aa25.94■■□□□ 1.74
GTF2F1-204ENST00000594965 IQSEC1Q6DN90 963 aa25.94■■□□□ 1.74
GTF2F1-204ENST00000594965 HOMER1Q86YM7 354 aa25.94■■□□□ 1.74
GTF2F1-204ENST00000594965 TAAR1Q96RJ0 339 aa25.94■■□□□ 1.74
GTF2F1-204ENST00000594965 RBM47A0AV96 593 aaKnown RBP25.93■■□□□ 1.74
GTF2F1-204ENST00000594965 MOXD2PA6NHM9 499 aa25.93■■□□□ 1.74
GTF2F1-204ENST00000594965 MAGEA10P43363 369 aaPredicted RBP25.93■■□□□ 1.74
GTF2F1-204ENST00000594965 MCF2L2Q86YR7 1114 aa25.93■■□□□ 1.74
GTF2F1-204ENST00000594965 TMTC2Q8N394 836 aa25.93■■□□□ 1.74
GTF2F1-204ENST00000594965 NEK1Q96PY6 1258 aa25.93■■□□□ 1.74
GTF2F1-204ENST00000594965 PCDHA1Q9Y5I3 950 aa25.93■■□□□ 1.74
GTF2F1-204ENST00000594965 ASGR1P07306 291 aa25.92■■□□□ 1.74
GTF2F1-204ENST00000594965 BEX3Q00994 111 aa25.92■■□□□ 1.74
GTF2F1-204ENST00000594965 EXOSC10Q01780 885 aaKnown RBP25.92■■□□□ 1.74
GTF2F1-204ENST00000594965 GHRHRQ02643 423 aa25.92■■□□□ 1.74
GTF2F1-204ENST00000594965 GNASQ5JWF2 1037 aa25.92■■□□□ 1.74
GTF2F1-204ENST00000594965 NOL8Q76FK4 1167 aaKnown RBP25.92■■□□□ 1.74
GTF2F1-204ENST00000594965 TLK2Q86UE8 772 aa25.92■■□□□ 1.74
GTF2F1-204ENST00000594965 KCNB2Q92953 911 aa25.92■■□□□ 1.74
GTF2F1-204ENST00000594965 SPC25Q9HBM1 224 aa25.92■■□□□ 1.74
GTF2F1-204ENST00000594965 CCDC69A6NI79 296 aa25.91■■□□□ 1.74
GTF2F1-204ENST00000594965 RXRAP19793 462 aa25.91■■□□□ 1.74
GTF2F1-204ENST00000594965 BMP8BP34820 402 aa25.91■■□□□ 1.74
GTF2F1-204ENST00000594965 HSD17B4P51659 736 aa25.91■■□□□ 1.74
GTF2F1-204ENST00000594965 PDE4DQ08499 809 aa25.91■■□□□ 1.74
GTF2F1-204ENST00000594965 DUSP28Q4G0W2 176 aa25.91■■□□□ 1.74
GTF2F1-204ENST00000594965 NFXL1Q6ZNB6 911 aa25.91■■□□□ 1.74
GTF2F1-204ENST00000594965 PCSK9Q8NBP7 692 aaKnown RBP25.91■■□□□ 1.74
GTF2F1-204ENST00000594965 CTCFLQ8NI51 663 aaPredicted RBP25.91■■□□□ 1.74
GTF2F1-204ENST00000594965 PNMA6FA0A0J9YX94 578 aa25.9■■□□□ 1.74
GTF2F1-204ENST00000594965 CFBP00751 764 aa25.9■■□□□ 1.74
GTF2F1-204ENST00000594965 FXR1P51114 621 aaKnown RBP eCLIP25.9■■□□□ 1.74
GTF2F1-204ENST00000594965 SGMS1Q86VZ5 419 aa25.9■■□□□ 1.74
GTF2F1-204ENST00000594965 TCEANC2Q96MN5 208 aa25.9■■□□□ 1.74
GTF2F1-204ENST00000594965 SPZ1Q9BXG8 430 aa25.9■■□□□ 1.74
GTF2F1-204ENST00000594965 WDR11Q9BZH6 1224 aa25.9■■□□□ 1.74
GTF2F1-204ENST00000594965 STARD7Q9NQZ5 370 aa25.9■■□□□ 1.74
GTF2F1-204ENST00000594965 Q9Y3F1 56 aa25.9■■□□□ 1.74
GTF2F1-204ENST00000594965 TRIOBPQ9H2D6 2365 aa25.9■■□□□ 1.74
GTF2F1-204ENST00000594965 DYNC1LI2O43237 492 aaPredicted RBP25.89■■□□□ 1.74
GTF2F1-204ENST00000594965 PLEKHA8P1O95397 391 aa25.89■■□□□ 1.74
GTF2F1-204ENST00000594965 SMARCA1P28370 1054 aa25.89■■□□□ 1.74
GTF2F1-204ENST00000594965 KIF5BP33176 963 aa25.89■■□□□ 1.74
GTF2F1-204ENST00000594965 TLE2Q04725 743 aa25.89■■□□□ 1.74
GTF2F1-204ENST00000594965 RAB11FIP4Q86YS3 637 aa25.89■■□□□ 1.74
GTF2F1-204ENST00000594965 MPHOSPH6Q99547 160 aaKnown RBP25.89■■□□□ 1.74
GTF2F1-204ENST00000594965 CENPBP07199 599 aaPredicted RBP25.88■■□□□ 1.73
GTF2F1-204ENST00000594965 HSPA4P34932 840 aa25.88■■□□□ 1.73
GTF2F1-204ENST00000594965 FSCN1Q16658 493 aaKnown RBP25.88■■□□□ 1.73
GTF2F1-204ENST00000594965 DHX32Q7L7V1 743 aaKnown RBP25.88■■□□□ 1.73
GTF2F1-204ENST00000594965 SH3RF1Q7Z6J0 888 aa25.88■■□□□ 1.73
GTF2F1-204ENST00000594965 SRBD1Q8N5C6 995 aaKnown RBP25.88■■□□□ 1.73
GTF2F1-204ENST00000594965 NSUN6Q8TEA1 469 aaKnown RBP25.88■■□□□ 1.73
GTF2F1-204ENST00000594965 RMDN3Q96TC7 470 aa25.88■■□□□ 1.73
GTF2F1-204ENST00000594965 PDLIM7Q9NR12 457 aa25.88■■□□□ 1.73
GTF2F1-204ENST00000594965 ELP1O95163 1332 aa25.88■■□□□ 1.73
GTF2F1-204ENST00000594965 MYH7BA7E2Y1 1941 aa25.87■■□□□ 1.73
GTF2F1-204ENST00000594965 B4DLN1 442 aa25.87■■□□□ 1.73
GTF2F1-204ENST00000594965 SLC34A2O95436 690 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms