RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 ABHD8Q96I13 439 aa16.26■□□□□ 0.19
MBD1-225ENST00000591535 PURBQ96QR8 312 aaKnown RBP16.26■□□□□ 0.19
MBD1-225ENST00000591535 RBM27Q9P2N5 1060 aaKnown RBP16.26■□□□□ 0.19
MBD1-225ENST00000591535 CYP2C19P33261 490 aa16.25■□□□□ 0.19
MBD1-225ENST00000591535 NAPAP54920 295 aa16.25■□□□□ 0.19
MBD1-225ENST00000591535 TRIM32Q13049 653 aa16.25■□□□□ 0.19
MBD1-225ENST00000591535 OLFML2BQ68BL8 750 aa16.25■□□□□ 0.19
MBD1-225ENST00000591535 FAM133AQ8N9E0 248 aa16.25■□□□□ 0.19
MBD1-225ENST00000591535 IL27Q8NEV9 243 aa16.25■□□□□ 0.19
MBD1-225ENST00000591535 TINF2Q9BSI4 451 aa16.25■□□□□ 0.19
MBD1-225ENST00000591535 RNF26Q9BY78 433 aaPredicted RBP16.25■□□□□ 0.19
MBD1-225ENST00000591535 RBBP6Q7Z6E9 1792 aaKnown RBP16.24■□□□□ 0.19
MBD1-225ENST00000591535 SCG2P13521 617 aa16.24■□□□□ 0.19
MBD1-225ENST00000591535 PRKAR2AP13861 404 aaKnown RBP16.24■□□□□ 0.19
MBD1-225ENST00000591535 HOXA13P31271 388 aaPredicted RBP16.24■□□□□ 0.19
MBD1-225ENST00000591535 PFKFB3Q16875 520 aaPredicted RBP16.24■□□□□ 0.19
MBD1-225ENST00000591535 WWC2Q6AWC2 1192 aa16.24■□□□□ 0.19
MBD1-225ENST00000591535 CUL5Q93034 780 aa16.24■□□□□ 0.19
MBD1-225ENST00000591535 GTF3C6Q969F1 213 aa16.24■□□□□ 0.19
MBD1-225ENST00000591535 ARMC5Q96C12 935 aa16.24■□□□□ 0.19
MBD1-225ENST00000591535 ZSCAN31Q96LW9 406 aaPredicted RBP16.24■□□□□ 0.19
MBD1-225ENST00000591535 ADD3Q9UEY8 706 aaKnown RBP16.24■□□□□ 0.19
MBD1-225ENST00000591535 SOWAHBA6NEL2 793 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 GCOM1H8Y6P7 765 aaPredicted RBP16.23■□□□□ 0.19
MBD1-225ENST00000591535 OPLAHO14841 1288 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 POLR2MP0CAP2 368 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 CACNB2Q08289 660 aaPredicted RBP16.23■□□□□ 0.19
MBD1-225ENST00000591535 ZNF333Q96JL9 665 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 MAF1Q9H063 256 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 PSTPIP2Q9H939 334 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 CCDC85CA6NKD9 419 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 hCG_1984214I3L0E3 225 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 CNGA1P29973 690 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 MTFR1Q15390 333 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 ZNF467Q7Z7K2 595 aaPredicted RBP16.23■□□□□ 0.19
MBD1-225ENST00000591535 FCHSD1Q86WN1 690 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 ZNF713Q8N859 430 aaPredicted RBP16.23■□□□□ 0.19
MBD1-225ENST00000591535 SMARCC2Q8TAQ2 1214 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 SYTL5Q8TDW5 730 aaPredicted RBP16.23■□□□□ 0.19
MBD1-225ENST00000591535 MPHOSPH6Q99547 160 aaKnown RBP16.23■□□□□ 0.19
MBD1-225ENST00000591535 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 BARHL2Q9NY43 387 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 MAP3K20Q9NYL2 800 aaKnown RBP16.23■□□□□ 0.19
MBD1-225ENST00000591535 CNPY2Q9Y2B0 182 aa16.23■□□□□ 0.19
MBD1-225ENST00000591535 ASB14A6NK59 587 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 STXBP3O00186 592 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 DTNBO60941 627 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 DEXIO95424 95 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 CCL5P13501 91 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 HSD17B4P51659 736 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 PKN1Q16512 942 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 PRAMEF19Q5SWL8 479 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 CCDC83Q8IWF9 413 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 MSL3Q8N5Y2 521 aaKnown RBP16.22■□□□□ 0.19
MBD1-225ENST00000591535 SAMD3Q8N6K7 520 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 CCDC12Q8WUD4 166 aaPredicted RBP16.22■□□□□ 0.19
MBD1-225ENST00000591535 FGD4Q96M96 766 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 TAAR1Q96RJ0 339 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 TMEM106CQ9BVX2 250 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 UNC93B1Q9H1C4 597 aa16.22■□□□□ 0.19
MBD1-225ENST00000591535 HMX1Q9NP08 348 aaPredicted RBP16.22■□□□□ 0.19
MBD1-225ENST00000591535 SH2B1Q9NRF2 756 aaPredicted RBP16.22■□□□□ 0.19
MBD1-225ENST00000591535 SMCO2A6NFE2 343 aa16.21■□□□□ 0.19
MBD1-225ENST00000591535 B4DLN1 442 aa16.21■□□□□ 0.19
MBD1-225ENST00000591535 MCM2P49736 904 aa16.21■□□□□ 0.19
MBD1-225ENST00000591535 ALDH5A1P51649 535 aaPredicted RBP16.21■□□□□ 0.19
MBD1-225ENST00000591535 MRPL12P52815 198 aaKnown RBP16.21■□□□□ 0.19
MBD1-225ENST00000591535 USP17L6PQ6QN14 398 aa16.21■□□□□ 0.19
MBD1-225ENST00000591535 MAMDC4Q6UXC1 1216 aa16.21■□□□□ 0.19
MBD1-225ENST00000591535 ARMCX2Q7L311 632 aa16.21■□□□□ 0.19
MBD1-225ENST00000591535 DNERQ8NFT8 737 aa16.21■□□□□ 0.19
MBD1-225ENST00000591535 NSUN6Q8TEA1 469 aaKnown RBP16.21■□□□□ 0.19
MBD1-225ENST00000591535 RMDN3Q96TC7 470 aa16.21■□□□□ 0.19
MBD1-225ENST00000591535 COL20A1Q9P218 1284 aa16.21■□□□□ 0.19
MBD1-225ENST00000591535 RPTORQ8N122 1335 aa16.21■□□□□ 0.19
MBD1-225ENST00000591535 LCTP09848 1927 aa16.21■□□□□ 0.19
MBD1-225ENST00000591535 MCM3APO60318 1980 aa16.21■□□□□ 0.19
MBD1-225ENST00000591535 BRCA2P51587 3418 aa16.21■□□□□ 0.19
MBD1-225ENST00000591535 SYNGAP1Q96PV0 1343 aa16.2■□□□□ 0.18
MBD1-225ENST00000591535 CD2BP2O95400 341 aaKnown RBP16.2■□□□□ 0.18
MBD1-225ENST00000591535 CTDNEP1O95476 244 aa16.2■□□□□ 0.18
MBD1-225ENST00000591535 ADCY7P51828 1080 aa16.2■□□□□ 0.18
MBD1-225ENST00000591535 ARHGEF16Q5VV41 709 aa16.2■□□□□ 0.18
MBD1-225ENST00000591535 TYW1BQ6NUM6 668 aa16.2■□□□□ 0.18
MBD1-225ENST00000591535 PPP1R18Q6NYC8 613 aa16.2■□□□□ 0.18
MBD1-225ENST00000591535 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.2■□□□□ 0.18
MBD1-225ENST00000591535 ZHX1Q9UKY1 873 aaPredicted RBP16.2■□□□□ 0.18
MBD1-225ENST00000591535 DDX49Q9Y6V7 483 aaKnown RBP16.2■□□□□ 0.18
MBD1-225ENST00000591535 ASTN1O14525 1302 aa16.19■□□□□ 0.18
MBD1-225ENST00000591535 SNAI1O95863 264 aaPredicted RBP16.19■□□□□ 0.18
MBD1-225ENST00000591535 EIF2AK2P19525 551 aaKnown RBP16.19■□□□□ 0.18
MBD1-225ENST00000591535 CCND3P30281 292 aaPredicted RBP16.19■□□□□ 0.18
MBD1-225ENST00000591535 GHRHRQ02643 423 aa16.19■□□□□ 0.18
MBD1-225ENST00000591535 PDE4DQ08499 809 aa16.19■□□□□ 0.18
MBD1-225ENST00000591535 MAP3K21Q5TCX8 1036 aa16.19■□□□□ 0.18
MBD1-225ENST00000591535 EEPD1Q7L9B9 569 aa16.19■□□□□ 0.18
MBD1-225ENST00000591535 C6orf50Q9HD87 102 aa16.19■□□□□ 0.18
MBD1-225ENST00000591535 VPS54Q9P1Q0 977 aa16.19■□□□□ 0.18
MBD1-225ENST00000591535 ORC3Q9UBD5 711 aaPredicted RBP16.19■□□□□ 0.18
MBD1-225ENST00000591535 STK36Q9NRP7 1315 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms