RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 KHSRPQ92945 711 aaKnown RBP eCLIP20.59■□□□□ 0.89
RETREG3-210ENST00000590541 CHMP4CQ96CF2 233 aa20.59■□□□□ 0.89
RETREG3-210ENST00000590541 GMCL1Q96IK5 515 aa20.59■□□□□ 0.89
RETREG3-210ENST00000590541 SLC9A7Q96T83 725 aa20.59■□□□□ 0.89
RETREG3-210ENST00000590541 ISY1Q9ULR0 285 aaKnown RBP20.59■□□□□ 0.89
RETREG3-210ENST00000590541 GPAA1O43292 621 aa20.58■□□□□ 0.89
RETREG3-210ENST00000590541 PLA2G6O60733 806 aa20.58■□□□□ 0.89
RETREG3-210ENST00000590541 TSPY3P0CV98 308 aa20.58■□□□□ 0.89
RETREG3-210ENST00000590541 TSPY8P0CW00 308 aa20.58■□□□□ 0.89
RETREG3-210ENST00000590541 MCCP23508 829 aa20.58■□□□□ 0.89
RETREG3-210ENST00000590541 SLC1A4P43007 532 aa20.58■□□□□ 0.89
RETREG3-210ENST00000590541 PHOSPHO2Q8TCD6 241 aa20.58■□□□□ 0.89
RETREG3-210ENST00000590541 ARNTL2Q8WYA1 636 aa20.58■□□□□ 0.89
RETREG3-210ENST00000590541 C11orf16Q9NQ32 467 aa20.58■□□□□ 0.89
RETREG3-210ENST00000590541 M0R2C6 588 aa20.57■□□□□ 0.88
RETREG3-210ENST00000590541 SMARCA5O60264 1052 aaPredicted RBP20.57■□□□□ 0.88
RETREG3-210ENST00000590541 ACTN1P12814 892 aa20.57■□□□□ 0.88
RETREG3-210ENST00000590541 IKQ13123 557 aaPredicted RBP20.57■□□□□ 0.88
RETREG3-210ENST00000590541 IFNL3Q8IZI9 196 aa20.57■□□□□ 0.88
RETREG3-210ENST00000590541 HLA-CQ95604 372 aa20.57■□□□□ 0.88
RETREG3-210ENST00000590541 LRRCC1Q9C099 1032 aa20.57■□□□□ 0.88
RETREG3-210ENST00000590541 POLR3EQ9NVU0 708 aa20.57■□□□□ 0.88
RETREG3-210ENST00000590541 RNF113AO15541 343 aaKnown RBP20.56■□□□□ 0.88
RETREG3-210ENST00000590541 LPXNO60711 386 aa20.56■□□□□ 0.88
RETREG3-210ENST00000590541 GNAT2P19087 354 aa20.56■□□□□ 0.88
RETREG3-210ENST00000590541 RFC2P35250 354 aa20.56■□□□□ 0.88
RETREG3-210ENST00000590541 TFAP4Q01664 338 aa20.56■□□□□ 0.88
RETREG3-210ENST00000590541 GRB10Q13322 594 aa20.56■□□□□ 0.88
RETREG3-210ENST00000590541 NSMFQ6X4W1 530 aa20.56■□□□□ 0.88
RETREG3-210ENST00000590541 KCTD1Q719H9 257 aa20.56■□□□□ 0.88
RETREG3-210ENST00000590541 SPRED2Q7Z698 418 aa20.56■□□□□ 0.88
RETREG3-210ENST00000590541 HERC6Q8IVU3 1022 aa20.56■□□□□ 0.88
RETREG3-210ENST00000590541 ECHDC1Q9NTX5 307 aa20.56■□□□□ 0.88
RETREG3-210ENST00000590541 PRR12Q9ULL5 1215 aa20.56■□□□□ 0.88
RETREG3-210ENST00000590541 PATL2C9JE40 543 aaKnown RBP20.55■□□□□ 0.88
RETREG3-210ENST00000590541 GPR37L1O60883 481 aa20.55■□□□□ 0.88
RETREG3-210ENST00000590541 APPP05067 770 aa20.55■□□□□ 0.88
RETREG3-210ENST00000590541 MYL3P08590 195 aa20.55■□□□□ 0.88
RETREG3-210ENST00000590541 IQCF3P0C7M6 154 aa20.55■□□□□ 0.88
RETREG3-210ENST00000590541 RCSD1Q6JBY9 416 aa20.55■□□□□ 0.88
RETREG3-210ENST00000590541 RASGRP2Q7LDG7 609 aa20.55■□□□□ 0.88
RETREG3-210ENST00000590541 PPP1R13LQ8WUF5 828 aa20.55■□□□□ 0.88
RETREG3-210ENST00000590541 WDR11Q9BZH6 1224 aa20.55■□□□□ 0.88
RETREG3-210ENST00000590541 RBM47A0AV96 593 aaKnown RBP20.54■□□□□ 0.88
RETREG3-210ENST00000590541 CPT1AP50416 773 aa20.54■□□□□ 0.88
RETREG3-210ENST00000590541 PDE4BQ07343 736 aa20.54■□□□□ 0.88
RETREG3-210ENST00000590541 NBPF20Q3BBV1 942 aa20.54■□□□□ 0.88
RETREG3-210ENST00000590541 MTG1Q9BT17 334 aaPredicted RBP20.54■□□□□ 0.88
RETREG3-210ENST00000590541 CCPG1Q9ULG6 757 aa20.54■□□□□ 0.88
RETREG3-210ENST00000590541 TANC1Q9C0D5 1861 aa20.54■□□□□ 0.88
RETREG3-210ENST00000590541 KIF28PB7ZC32 967 aa20.53■□□□□ 0.88
RETREG3-210ENST00000590541 PITPNM1O00562 1244 aa20.53■□□□□ 0.88
RETREG3-210ENST00000590541 ALDH5A1P51649 535 aaPredicted RBP20.53■□□□□ 0.88
RETREG3-210ENST00000590541 FAM47CQ5HY64 1035 aa20.53■□□□□ 0.88
RETREG3-210ENST00000590541 CD320Q9NPF0 282 aa20.53■□□□□ 0.88
RETREG3-210ENST00000590541 SCN10AQ9Y5Y9 1956 aa20.53■□□□□ 0.88
RETREG3-210ENST00000590541 COL4A4P53420 1690 aaPredicted RBP20.52■□□□□ 0.88
RETREG3-210ENST00000590541 FAM86C2PA6NEL3 165 aa20.52■□□□□ 0.88
RETREG3-210ENST00000590541 ICAM1P05362 532 aa20.52■□□□□ 0.88
RETREG3-210ENST00000590541 ZFYP08048 801 aaPredicted RBP20.52■□□□□ 0.88
RETREG3-210ENST00000590541 BAATQ14032 418 aaPredicted RBP20.52■□□□□ 0.88
RETREG3-210ENST00000590541 RETREG2Q8NC44 543 aa20.52■□□□□ 0.88
RETREG3-210ENST00000590541 OR6J1Q8NGC5 347 aa20.52■□□□□ 0.88
RETREG3-210ENST00000590541 FTOQ9C0B1 505 aaKnown RBP eCLIP20.52■□□□□ 0.885e-9■■■■□ 21.6
RETREG3-210ENST00000590541 DCTPP1Q9H773 170 aa20.52■□□□□ 0.88
RETREG3-210ENST00000590541 GPHNQ9NQX3 736 aaPredicted RBP20.52■□□□□ 0.88
RETREG3-210ENST00000590541 IL17RBQ9NRM6 502 aa20.52■□□□□ 0.88
RETREG3-210ENST00000590541 PTPRSQ13332 1948 aa20.51■□□□□ 0.87
RETREG3-210ENST00000590541 PPARAQ07869 468 aa20.51■□□□□ 0.87
RETREG3-210ENST00000590541 TSHZ3Q63HK5 1081 aa20.51■□□□□ 0.87
RETREG3-210ENST00000590541 NFRKBQ6P4R8 1299 aa20.51■□□□□ 0.87
RETREG3-210ENST00000590541 SEC62Q99442 399 aaKnown RBP20.51■□□□□ 0.87
RETREG3-210ENST00000590541 RANBP17Q9H2T7 1088 aaKnown RBP20.51■□□□□ 0.87
RETREG3-210ENST00000590541 ADD3Q9UEY8 706 aaKnown RBP20.51■□□□□ 0.87
RETREG3-210ENST00000590541 STX8Q9UNK0 236 aa20.51■□□□□ 0.87
RETREG3-210ENST00000590541 TET1Q8NFU7 2136 aa20.5■□□□□ 0.87
RETREG3-210ENST00000590541 LOC102724159A0A0B4J2E5 919 aa20.5■□□□□ 0.87
RETREG3-210ENST00000590541 LCHNA4D1U4 455 aa20.5■□□□□ 0.87
RETREG3-210ENST00000590541 PI4K2BG5E9Z4 385 aa20.5■□□□□ 0.87
RETREG3-210ENST00000590541 NFIBO00712 420 aa20.5■□□□□ 0.87
RETREG3-210ENST00000590541 NMT2O60551 498 aa20.5■□□□□ 0.87
RETREG3-210ENST00000590541 BAIAP3O94812 1187 aa20.5■□□□□ 0.87
RETREG3-210ENST00000590541 PWP2Q15269 919 aaKnown RBP20.5■□□□□ 0.87
RETREG3-210ENST00000590541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.5■□□□□ 0.87
RETREG3-210ENST00000590541 A6NJR5 290 aa20.49■□□□□ 0.87
RETREG3-210ENST00000590541 SLC3A2P08195 630 aaKnown RBP20.49■□□□□ 0.87
RETREG3-210ENST00000590541 RRP1P56182 461 aaKnown RBP20.49■□□□□ 0.87
RETREG3-210ENST00000590541 PTPN11Q06124 597 aaPredicted RBP20.49■□□□□ 0.87
RETREG3-210ENST00000590541 BFSP2Q13515 415 aa20.49■□□□□ 0.87
RETREG3-210ENST00000590541 GPNMBQ14956 572 aa20.49■□□□□ 0.87
RETREG3-210ENST00000590541 TMCO2Q7Z6W1 182 aaPredicted RBP20.49■□□□□ 0.87
RETREG3-210ENST00000590541 NACAP1Q9BZK3 213 aa20.49■□□□□ 0.87
RETREG3-210ENST00000590541 PPP4R3BQ5MIZ7 849 aa20.48■□□□□ 0.87
RETREG3-210ENST00000590541 TTBK2Q6IQ55 1244 aa20.48■□□□□ 0.87
RETREG3-210ENST00000590541 SLC30A10Q6XR72 485 aa20.48■□□□□ 0.87
RETREG3-210ENST00000590541 GDPD5Q8WTR4 605 aa20.48■□□□□ 0.87
RETREG3-210ENST00000590541 COPS5Q92905 334 aa20.48■□□□□ 0.87
RETREG3-210ENST00000590541 GPATCH3Q96I76 525 aa20.48■□□□□ 0.87
RETREG3-210ENST00000590541 NAPBQ9H115 298 aa20.48■□□□□ 0.87
RETREG3-210ENST00000590541 INCENPQ9NQS7 918 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms