RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 CCDC194A0A1B0GVG4 234 aa17.35■□□□□ 0.37
DDX39A-211ENST00000590239 NFIBO00712 420 aa17.35■□□□□ 0.37
DDX39A-211ENST00000590239 AOC2O75106 756 aa17.35■□□□□ 0.37
DDX39A-211ENST00000590239 HSD17B4P51659 736 aa17.35■□□□□ 0.37
DDX39A-211ENST00000590239 CCNA1P78396 465 aa17.35■□□□□ 0.37
DDX39A-211ENST00000590239 AP3B2Q13367 1082 aa17.35■□□□□ 0.37
DDX39A-211ENST00000590239 MUM1L1Q5H9M0 696 aa17.35■□□□□ 0.37
DDX39A-211ENST00000590239 ATL3Q6DD88 541 aa17.35■□□□□ 0.37
DDX39A-211ENST00000590239 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.35■□□□□ 0.37
DDX39A-211ENST00000590239 MROH8Q9H579 483 aa17.35■□□□□ 0.37
DDX39A-211ENST00000590239 ZFYVE28Q9HCC9 887 aa17.35■□□□□ 0.37
DDX39A-211ENST00000590239 BIN2Q9UBW5 565 aaPredicted RBP17.35■□□□□ 0.37
DDX39A-211ENST00000590239 SMCHD1A6NHR9 2005 aa17.34■□□□□ 0.37
DDX39A-211ENST00000590239 CFBP00751 764 aa17.34■□□□□ 0.37
DDX39A-211ENST00000590239 VEGFBP49765 207 aa17.34■□□□□ 0.37
DDX39A-211ENST00000590239 UBE2SQ16763 222 aa17.34■□□□□ 0.37
DDX39A-211ENST00000590239 FAM110CQ1W6H9 321 aa17.34■□□□□ 0.37
DDX39A-211ENST00000590239 USP17L6PQ6QN14 398 aa17.34■□□□□ 0.37
DDX39A-211ENST00000590239 CLEC17AQ6ZS10 378 aa17.34■□□□□ 0.37
DDX39A-211ENST00000590239 ANKRD13CQ8N6S4 541 aa17.34■□□□□ 0.37
DDX39A-211ENST00000590239 RASGRP4Q8TDF6 673 aa17.34■□□□□ 0.37
DDX39A-211ENST00000590239 CA12O43570 354 aa17.33■□□□□ 0.36
DDX39A-211ENST00000590239 TLR2O60603 784 aa17.33■□□□□ 0.36
DDX39A-211ENST00000590239 PEX10O60683 326 aa17.33■□□□□ 0.36
DDX39A-211ENST00000590239 TRAPPC10P48553 1259 aa17.33■□□□□ 0.36
DDX39A-211ENST00000590239 NONOQ15233 471 aaKnown RBP eCLIP17.33■□□□□ 0.362e-7■■■□□ 16.3
DDX39A-211ENST00000590239 Q3C1V9 767 aa17.33■□□□□ 0.36
DDX39A-211ENST00000590239 RILPL1Q5EBL4 403 aa17.33■□□□□ 0.36
DDX39A-211ENST00000590239 MYSM1Q5VVJ2 828 aa17.33■□□□□ 0.36
DDX39A-211ENST00000590239 JAKMIP3Q5VZ66 844 aa17.33■□□□□ 0.36
DDX39A-211ENST00000590239 PIK3AP1Q6ZUJ8 805 aa17.33■□□□□ 0.36
DDX39A-211ENST00000590239 TBC1D5Q92609 795 aa17.33■□□□□ 0.36
DDX39A-211ENST00000590239 ZNF396Q96N95 335 aaPredicted RBP17.33■□□□□ 0.36
DDX39A-211ENST00000590239 TMEM260Q9NX78 707 aa17.33■□□□□ 0.36
DDX39A-211ENST00000590239 NOL7Q9UMY1 257 aaKnown RBP17.33■□□□□ 0.36
DDX39A-211ENST00000590239 SPDYE3A6NKU9 549 aa17.32■□□□□ 0.36
DDX39A-211ENST00000590239 BCRP11274 1271 aa17.32■□□□□ 0.36
DDX39A-211ENST00000590239 ERCC3P19447 782 aa17.32■□□□□ 0.36
DDX39A-211ENST00000590239 HOXA13P31271 388 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-211ENST00000590239 EARS2Q5JPH6 523 aaKnown RBP17.32■□□□□ 0.36
DDX39A-211ENST00000590239 RNF207Q6ZRF8 634 aa17.32■□□□□ 0.36
DDX39A-211ENST00000590239 NCAPG2Q86XI2 1143 aa17.32■□□□□ 0.36
DDX39A-211ENST00000590239 RBBP6Q7Z6E9 1792 aaKnown RBP17.31■□□□□ 0.36
DDX39A-211ENST00000590239 PFASO15067 1338 aa17.31■□□□□ 0.36
DDX39A-211ENST00000590239 FAM205CA6NFA0 338 aa17.31■□□□□ 0.36
DDX39A-211ENST00000590239 RPS6P62753 249 aaKnown RBP17.31■□□□□ 0.36
DDX39A-211ENST00000590239 CRHR2Q13324 411 aa17.31■□□□□ 0.36
DDX39A-211ENST00000590239 BAATQ14032 418 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-211ENST00000590239 NOM1Q5C9Z4 860 aaKnown RBP17.31■□□□□ 0.36
DDX39A-211ENST00000590239 FAM173BQ6P4H8 233 aa17.31■□□□□ 0.36
DDX39A-211ENST00000590239 C17orf99Q6UX52 265 aa17.31■□□□□ 0.36
DDX39A-211ENST00000590239 NSMFQ6X4W1 530 aa17.31■□□□□ 0.36
DDX39A-211ENST00000590239 SYTL5Q8TDW5 730 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-211ENST00000590239 ANO3Q9BYT9 981 aa17.31■□□□□ 0.36
DDX39A-211ENST00000590239 EHMT1Q9H9B1 1298 aa17.31■□□□□ 0.36
DDX39A-211ENST00000590239 A1CFQ9NQ94 594 aaKnown RBP17.31■□□□□ 0.36
DDX39A-211ENST00000590239 CFAP45Q9UL16 551 aa17.31■□□□□ 0.36
DDX39A-211ENST00000590239 THSD7BQ9C0I4 1608 aa17.3■□□□□ 0.36
DDX39A-211ENST00000590239 BAG4O95429 457 aaKnown RBP17.3■□□□□ 0.36
DDX39A-211ENST00000590239 TOB1P50616 345 aaPredicted RBP17.3■□□□□ 0.36
DDX39A-211ENST00000590239 HTRA3P83110 453 aa17.3■□□□□ 0.36
DDX39A-211ENST00000590239 DNM1Q05193 864 aaKnown RBP17.3■□□□□ 0.36
DDX39A-211ENST00000590239 FCHSD1Q86WN1 690 aa17.3■□□□□ 0.36
DDX39A-211ENST00000590239 GBP4Q96PP9 640 aa17.3■□□□□ 0.36
DDX39A-211ENST00000590239 CFHR5Q9BXR6 569 aa17.3■□□□□ 0.36
DDX39A-211ENST00000590239 CYP39A1Q9NYL5 469 aa17.3■□□□□ 0.36
DDX39A-211ENST00000590239 CPA4Q9UI42 421 aa17.3■□□□□ 0.36
DDX39A-211ENST00000590239 FCER1AP12319 257 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 MAPK4P31152 587 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 SREBF1P36956 1147 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 USP11P51784 963 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 KRT85P78386 507 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 INF2Q27J81 1249 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 FOXD4L6Q3SYB3 417 aaPredicted RBP17.29■□□□□ 0.36
DDX39A-211ENST00000590239 FOXD4L3Q6VB84 417 aaPredicted RBP17.29■□□□□ 0.36
DDX39A-211ENST00000590239 SLC30A10Q6XR72 485 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 NEK8Q86SG6 692 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
DDX39A-211ENST00000590239 ABRAQ8N0Z2 381 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 ANKRD35Q8N283 1001 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 TBCKQ8TEA7 893 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 CRYGNQ8WXF5 182 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 NAP1L4Q99733 375 aaKnown RBP17.29■□□□□ 0.36
DDX39A-211ENST00000590239 PORCNQ9H237 461 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 COL20A1Q9P218 1284 aa17.29■□□□□ 0.36
DDX39A-211ENST00000590239 FRMPD4Q14CM0 1322 aa17.28■□□□□ 0.36
DDX39A-211ENST00000590239 RPTORQ8N122 1335 aa17.28■□□□□ 0.36
DDX39A-211ENST00000590239 STRNO43815 780 aa17.28■□□□□ 0.36
DDX39A-211ENST00000590239 ORC2Q13416 577 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-211ENST00000590239 KCTD2Q14681 263 aa17.28■□□□□ 0.36
DDX39A-211ENST00000590239 TTC38Q5R3I4 469 aa17.28■□□□□ 0.36
DDX39A-211ENST00000590239 ANO1Q5XXA6 986 aa17.28■□□□□ 0.36
DDX39A-211ENST00000590239 PGBD1Q96JS3 809 aa17.28■□□□□ 0.36
DDX39A-211ENST00000590239 USP28Q96RU2 1077 aa17.28■□□□□ 0.36
DDX39A-211ENST00000590239 MMP19Q99542 508 aa17.28■□□□□ 0.36
DDX39A-211ENST00000590239 EFCC1Q9HA90 598 aa17.28■□□□□ 0.36
DDX39A-211ENST00000590239 POLR3EQ9NVU0 708 aa17.28■□□□□ 0.36
DDX39A-211ENST00000590239 RTEL1Q9NZ71 1219 aa17.28■□□□□ 0.36
DDX39A-211ENST00000590239 TFIP11Q9UBB9 837 aaKnown RBP17.28■□□□□ 0.36
DDX39A-211ENST00000590239 MYH15Q9Y2K3 1946 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms