RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 H0YIN7 160 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 GCFC2P16383 781 aaKnown RBP21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 TTI2Q6NXR4 508 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 CYP26C1Q6V0L0 522 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 IRF2BP1Q8IU81 584 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 DCAF4Q8WV16 495 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 P2RX5Q93086 422 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 MKL1Q969V6 931 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 TRIM34Q9BYJ4 488 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 PI4KBQ9UBF8 816 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 ADAMTSL1Q8N6G6 1762 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 TRIM49BA6NDI0 452 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 FXR1P51114 621 aaKnown RBP eCLIP21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 LRRC15Q8TF66 581 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 IDI2Q9BXS1 227 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 KANSL2Q9H9L4 492 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 DBNDD1Q9H9R9 158 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 ABHD10Q9NUJ1 306 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 NYAP2Q9P242 653 aa21.47■■□□□ 1.03
PRKCSH-209ENST00000589838 PVALEFA0A1B0GWK0 134 aa21.46■■□□□ 1.03
PRKCSH-209ENST00000589838 TNNI2P48788 182 aa21.46■■□□□ 1.03
PRKCSH-209ENST00000589838 CLK2P49760 499 aaKnown RBP21.46■■□□□ 1.03
PRKCSH-209ENST00000589838 DNM2P50570 870 aa21.46■■□□□ 1.03
PRKCSH-209ENST00000589838 ELF2Q15723 593 aa21.46■■□□□ 1.03
PRKCSH-209ENST00000589838 KRT79Q5XKE5 535 aa21.46■■□□□ 1.03
PRKCSH-209ENST00000589838 RAD9BQ6WBX8 426 aa21.46■■□□□ 1.03
PRKCSH-209ENST00000589838 CLEC10AQ8IUN9 316 aa21.46■■□□□ 1.03
PRKCSH-209ENST00000589838 CSGALNACT2Q8N6G5 542 aa21.46■■□□□ 1.03
PRKCSH-209ENST00000589838 MB21D1Q8N884 522 aa21.46■■□□□ 1.03
PRKCSH-209ENST00000589838 DESI2Q9BSY9 194 aa21.46■■□□□ 1.03
PRKCSH-209ENST00000589838 NFIAQ12857 509 aa21.45■■□□□ 1.02
PRKCSH-209ENST00000589838 TTBK2Q6IQ55 1244 aa21.45■■□□□ 1.02
PRKCSH-209ENST00000589838 PSTPIP2Q9H939 334 aa21.45■■□□□ 1.02
PRKCSH-209ENST00000589838 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.45■■□□□ 1.022e-6■□□□□ 11.3
PRKCSH-209ENST00000589838 V9GYY5 206 aaPredicted RBP21.45■■□□□ 1.02
PRKCSH-209ENST00000589838 RBM5P52756 815 aaKnown RBP eCLIP21.45■■□□□ 1.029e-8■■□□□ 11.4
PRKCSH-209ENST00000589838 PMS1P54277 932 aaKnown RBP21.45■■□□□ 1.02
PRKCSH-209ENST00000589838 GRB10Q13322 594 aa21.45■■□□□ 1.02
PRKCSH-209ENST00000589838 MTF1Q14872 753 aa21.45■■□□□ 1.02
PRKCSH-209ENST00000589838 TSR1Q2NL82 804 aaKnown RBP21.45■■□□□ 1.02
PRKCSH-209ENST00000589838 CERKLQ49MI3 558 aaPredicted RBP21.45■■□□□ 1.02
PRKCSH-209ENST00000589838 ARID3AQ99856 593 aa21.45■■□□□ 1.02
PRKCSH-209ENST00000589838 USP17L10C9JJH3 530 aa21.44■■□□□ 1.02
PRKCSH-209ENST00000589838 KIF5CO60282 957 aa21.44■■□□□ 1.02
PRKCSH-209ENST00000589838 TDP2O95551 362 aa21.44■■□□□ 1.02
PRKCSH-209ENST00000589838 KRT9P35527 623 aa21.44■■□□□ 1.02
PRKCSH-209ENST00000589838 MAP3K9P80192 1104 aa21.44■■□□□ 1.02
PRKCSH-209ENST00000589838 DACT2Q5SW24 774 aa21.44■■□□□ 1.02
PRKCSH-209ENST00000589838 MCTP2Q6DN12 878 aa21.44■■□□□ 1.02
PRKCSH-209ENST00000589838 KIAA0825Q8IV33 1275 aa21.44■■□□□ 1.02
PRKCSH-209ENST00000589838 UBXN4Q92575 508 aa21.44■■□□□ 1.02
PRKCSH-209ENST00000589838 LARP4BQ92615 738 aaKnown RBP21.44■■□□□ 1.02
PRKCSH-209ENST00000589838 NUP58Q9BVL2 599 aa21.44■■□□□ 1.02
PRKCSH-209ENST00000589838 SERPINA10Q9UK55 444 aa21.44■■□□□ 1.02
PRKCSH-209ENST00000589838 EFCAB8A8MWE9 144 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 SLC26A4O43511 780 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 SLC37A4O43826 429 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 MARCH6O60337 910 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 ECE2O60344 883 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 TUBB2AQ13885 445 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 ZNF772Q68DY9 489 aaPredicted RBP21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 UNC13DQ70J99 1090 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 KCTD1Q719H9 257 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 ZNF507Q8TCN5 953 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 WDR24Q96S15 920 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 DUSP9Q99956 384 aaKnown RBP21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 TUBB2BQ9BVA1 445 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 MRPL44Q9H9J2 332 aaKnown RBP21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 OGFRQ9NZT2 677 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 DDX25Q9UHL0 483 aaKnown RBP21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 PPP1R11O60927 126 aaPredicted RBP21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 SLC16A2P36021 539 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 ERCC6LQ2NKX8 1250 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 ZSCAN29Q8IWY8 852 aaPredicted RBP21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 OR8K1Q8NGG5 319 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 SNX29Q8TEQ0 813 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 CNKSR1Q969H4 720 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 PNMA5Q96PV4 448 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 TUBGCP2Q9BSJ2 902 aa21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 LUC7L2Q9Y383 392 aaKnown RBP21.43■■□□□ 1.02
PRKCSH-209ENST00000589838 PES1O00541 588 aaKnown RBP21.42■■□□□ 1.02
PRKCSH-209ENST00000589838 FGFR1OPO95684 399 aaKnown RBP21.42■■□□□ 1.02
PRKCSH-209ENST00000589838 SLC1A4P43007 532 aa21.42■■□□□ 1.02
PRKCSH-209ENST00000589838 STK4Q13043 487 aa21.42■■□□□ 1.02
PRKCSH-209ENST00000589838 PSMD2Q13200 908 aa21.42■■□□□ 1.02
PRKCSH-209ENST00000589838 UBE2SQ16763 222 aa21.42■■□□□ 1.02
PRKCSH-209ENST00000589838 SLFN13Q68D06 897 aa21.42■■□□□ 1.02
PRKCSH-209ENST00000589838 ZFPM1Q8IX07 1006 aa21.42■■□□□ 1.02
PRKCSH-209ENST00000589838 RETREG2Q8NC44 543 aa21.42■■□□□ 1.02
PRKCSH-209ENST00000589838 RAD54LQ92698 747 aa21.42■■□□□ 1.02
PRKCSH-209ENST00000589838 KIFC2Q96AC6 838 aa21.42■■□□□ 1.02
PRKCSH-209ENST00000589838 BLOC1S4Q9NUP1 217 aa21.42■■□□□ 1.02
PRKCSH-209ENST00000589838 EDIL3O43854 480 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 EEF2P13639 858 aaKnown RBP21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 SEPT2Q15019 361 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 ANKRD40Q6AI12 368 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 TATDN1Q6P1N9 297 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 TMEM179Q6ZVK1 233 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 IQCDQ96DY2 449 aa21.41■■□□□ 1.02
PRKCSH-209ENST00000589838 KCNQ5Q9NR82 932 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms