RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 ARHGEF6Q15052 776 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 NECTIN1Q15223 517 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 CCDC178Q5BJE1 867 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 RCSD1Q6JBY9 416 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 STOX1Q6ZVD7 989 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 RALYLQ86SE5 291 aaKnown RBP6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 IQCA1Q86XH1 822 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 ANKRD13BQ86YJ7 626 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 SAMD3Q8N6K7 520 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 ENAHQ8N8S7 591 aaPredicted RBP6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 GPRC5AQ8NFJ5 357 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 AGBL1Q96MI9 1066 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 ZSCAN10Q96SZ4 725 aaPredicted RBP6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 SLF1Q9BQI6 1058 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 LZTS2Q9BRK4 669 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 TACO1Q9BSH4 297 aaKnown RBP6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 UBAC1Q9BSL1 405 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 PAGR1Q9BTK6 254 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 POLR3CQ9BUI4 534 aaPredicted RBP6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 C22orf23Q9BZE7 217 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 MCOLN1Q9GZU1 580 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 FBXO28Q9NVF7 368 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 RBPJLQ9UBG7 517 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 PPP1R9AQ9ULJ8 1098 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 TRIM17Q9Y577 477 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 TNKSO95271 1327 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 CENPFP49454 3210 aa6.97□□□□□ -1.29
PPP4R1-223ENST00000582933 VWA5AO00534 786 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 KIF5CO60282 957 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 CNMDO75829 334 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 SNHG28P0DPA3 235 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 SKILP12757 684 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 MSNP26038 577 aaKnown RBP6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 MAPK4P31152 587 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 SLC1A4P43007 532 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 PSMC4P43686 418 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 STAT2P52630 851 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 PRMT2P55345 433 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 CCNA1P78396 465 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 MCM6Q14566 821 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 DNAJC21Q5F1R6 531 aaKnown RBP6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 RNF20Q5VTR2 975 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 CREB3L3Q68CJ9 461 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 SLFN13Q68D06 897 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 FBXO46Q6PJ61 603 aaPredicted RBP6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 CYB5R4Q7L1T6 521 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 RASGRP2Q7LDG7 609 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 DGKHQ86XP1 1220 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 MB21D2Q8IYB1 491 aaPredicted RBP6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 PDCL2Q8N4E4 241 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 NCOA7Q8NI08 942 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 DCAF4Q8WV16 495 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 SOCS4Q8WXH5 440 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 ANKS1AQ92625 1134 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 ATG4CQ96DT6 458 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 TTC14Q96N46 770 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 TMEM47Q9BQJ4 181 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 DEF6Q9H4E7 631 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 UPF2Q9HAU5 1272 aaKnown RBP6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 HOXC10Q9NYD6 342 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 OGFRQ9NZT2 677 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 BTBD7Q9P203 1132 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 ZSWIM5Q9P217 1185 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 FEM1BQ9UK73 627 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 ADAMTS5Q9UNA0 930 aa6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 R3HCC1Q9Y3T6 440 aaKnown RBP6.96□□□□□ -1.3
PPP4R1-223ENST00000582933 ZSWIM8A7E2V4 1837 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 ZNF236Q9UL36 1845 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 TNPO2O14787 897 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 ATP2A1O14983 1001 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 MAP3K13O43283 966 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 PEX10O60683 326 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 PLA2G6O60733 806 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 FMNL1O95466 1100 aaPredicted RBP6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 PDHBP11177 359 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 BMP3P12645 472 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 MCM5P33992 734 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 ANTXR2P58335 489 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 PRKCZQ05513 592 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 IFT88Q13099 833 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 BECN1Q14457 450 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 SART3Q15020 963 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 SEC23AQ15436 765 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 MAP9Q49MG5 647 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 IFIT1BQ5T764 474 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 FAM160B2Q86V87 743 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 PRPF38AQ8NAV1 312 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 PNMA1Q8ND90 353 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 SHCBP1Q8NEM2 672 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 REPS2Q8NFH8 660 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 TNPO1Q92973 898 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 COA7Q96BR5 231 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 ZKSCAN3Q9BRR0 538 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 TEX13BQ9BXU2 312 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 MFRPQ9BY79 579 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 IQCGQ9H095 443 aaKnown RBP6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 SPATC1LQ9H0A9 340 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 PORCNQ9H237 461 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 IGSF5Q9NSI5 407 aa6.95□□□□□ -1.3
PPP4R1-223ENST00000582933 ETAA1Q9NY74 926 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms