RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 EEPD1Q7L9B9 569 aa26.72■■□□□ 1.87
CDKN2A-212ENST00000578845 SLC43A3Q8NBI5 491 aa26.72■■□□□ 1.87
CDKN2A-212ENST00000578845 CDH23Q9H251 3354 aa26.72■■□□□ 1.87
CDKN2A-212ENST00000578845 RBM47A0AV96 593 aaKnown RBP26.71■■□□□ 1.87
CDKN2A-212ENST00000578845 EDNRBP24530 442 aa26.71■■□□□ 1.87
CDKN2A-212ENST00000578845 RPS6P62753 249 aaKnown RBP26.71■■□□□ 1.87
CDKN2A-212ENST00000578845 DUSP28Q4G0W2 176 aa26.71■■□□□ 1.87
CDKN2A-212ENST00000578845 FAM126BQ8IXS8 530 aa26.71■■□□□ 1.87
CDKN2A-212ENST00000578845 DNERQ8NFT8 737 aa26.71■■□□□ 1.87
CDKN2A-212ENST00000578845 UBA5Q9GZZ9 404 aa26.71■■□□□ 1.87
CDKN2A-212ENST00000578845 AP5M1Q9H0R1 490 aa26.71■■□□□ 1.87
CDKN2A-212ENST00000578845 TIMP1P01033 207 aa26.7■■□□□ 1.86
CDKN2A-212ENST00000578845 FPGSQ05932 587 aa26.7■■□□□ 1.86
CDKN2A-212ENST00000578845 SEZ6LQ9BYH1 1024 aa26.7■■□□□ 1.86
CDKN2A-212ENST00000578845 CPVLQ9H3G5 476 aa26.7■■□□□ 1.86
CDKN2A-212ENST00000578845 DYNC1LI2O43237 492 aaPredicted RBP26.69■■□□□ 1.86
CDKN2A-212ENST00000578845 CHMLP26374 656 aa26.69■■□□□ 1.86
CDKN2A-212ENST00000578845 CALML3P27482 149 aa26.69■■□□□ 1.86
CDKN2A-212ENST00000578845 EPHB4P54760 987 aa26.69■■□□□ 1.86
CDKN2A-212ENST00000578845 CDC37Q16543 378 aaPredicted RBP26.69■■□□□ 1.86
CDKN2A-212ENST00000578845 TMEM63BQ5T3F8 832 aa26.69■■□□□ 1.86
CDKN2A-212ENST00000578845 CXCL17Q6UXB2 119 aa26.69■■□□□ 1.86
CDKN2A-212ENST00000578845 KIAA1211Q6ZU35 1233 aa26.69■■□□□ 1.86
CDKN2A-212ENST00000578845 ADGRF4Q8IZF3 695 aa26.69■■□□□ 1.86
CDKN2A-212ENST00000578845 RUFY2Q8WXA3 655 aa26.69■■□□□ 1.86
CDKN2A-212ENST00000578845 VTI1AQ96AJ9 217 aa26.69■■□□□ 1.86
CDKN2A-212ENST00000578845 UBAC1Q9BSL1 405 aa26.69■■□□□ 1.86
CDKN2A-212ENST00000578845 STXBP5LQ9Y2K9 1186 aa26.69■■□□□ 1.86
CDKN2A-212ENST00000578845 ZEB2O60315 1214 aa26.68■■□□□ 1.86
CDKN2A-212ENST00000578845 CD4P01730 458 aa26.68■■□□□ 1.86
CDKN2A-212ENST00000578845 PTGS1P23219 599 aa26.68■■□□□ 1.86
CDKN2A-212ENST00000578845 IRX6P78412 446 aaPredicted RBP26.68■■□□□ 1.86
CDKN2A-212ENST00000578845 SEC23AQ15436 765 aa26.68■■□□□ 1.86
CDKN2A-212ENST00000578845 ABCB11O95342 1321 aa26.67■■□□□ 1.86
CDKN2A-212ENST00000578845 PARP1P09874 1014 aaKnown RBP26.67■■□□□ 1.86
CDKN2A-212ENST00000578845 SMAD3P84022 425 aaKnown RBP26.67■■□□□ 1.86
CDKN2A-212ENST00000578845 USH1GQ495M9 461 aa26.67■■□□□ 1.86
CDKN2A-212ENST00000578845 MFSD5Q6N075 450 aa26.67■■□□□ 1.86
CDKN2A-212ENST00000578845 MPHOSPH6Q99547 160 aaKnown RBP26.67■■□□□ 1.86
CDKN2A-212ENST00000578845 WDR11Q9BZH6 1224 aa26.67■■□□□ 1.86
CDKN2A-212ENST00000578845 A0A0C4DFX4 3053 aa26.67■■□□□ 1.86
CDKN2A-212ENST00000578845 TLR3O15455 904 aaKnown RBP26.66■■□□□ 1.86
CDKN2A-212ENST00000578845 IFIT1BQ5T764 474 aaKnown RBP26.66■■□□□ 1.86
CDKN2A-212ENST00000578845 GRIN2DO15399 1336 aa26.65■■□□□ 1.86
CDKN2A-212ENST00000578845 CYP21A2P08686 494 aa26.65■■□□□ 1.86
CDKN2A-212ENST00000578845 PDE4DQ08499 809 aa26.65■■□□□ 1.86
CDKN2A-212ENST00000578845 ITGA7Q13683 1181 aa26.65■■□□□ 1.86
CDKN2A-212ENST00000578845 CYB5R4Q7L1T6 521 aa26.65■■□□□ 1.86
CDKN2A-212ENST00000578845 JMJD4Q9H9V9 463 aa26.65■■□□□ 1.86
CDKN2A-212ENST00000578845 U3KPZ7 1027 aaPredicted RBP26.65■■□□□ 1.86
CDKN2A-212ENST00000578845 B4DLN1 442 aa26.64■■□□□ 1.86
CDKN2A-212ENST00000578845 SGSM2O43147 1006 aa26.64■■□□□ 1.86
CDKN2A-212ENST00000578845 MRPL12P52815 198 aaKnown RBP26.64■■□□□ 1.86
CDKN2A-212ENST00000578845 PTH1RQ03431 593 aa26.64■■□□□ 1.86
CDKN2A-212ENST00000578845 QRICH1Q2TAL8 776 aa26.64■■□□□ 1.86
CDKN2A-212ENST00000578845 RNPC3Q96LT9 517 aaKnown RBP26.64■■□□□ 1.86
CDKN2A-212ENST00000578845 NKRFO15226 690 aaKnown RBP eCLIP26.63■■□□□ 1.85
CDKN2A-212ENST00000578845 TRDNQ13061 729 aa26.63■■□□□ 1.85
CDKN2A-212ENST00000578845 SCFD2Q8WU76 684 aa26.63■■□□□ 1.85
CDKN2A-212ENST00000578845 GUCD1Q96NT3 240 aa26.63■■□□□ 1.85
CDKN2A-212ENST00000578845 CPT1AP50416 773 aa26.62■■□□□ 1.85
CDKN2A-212ENST00000578845 PPIGQ13427 754 aaKnown RBP eCLIP26.62■■□□□ 1.85
CDKN2A-212ENST00000578845 ZNF697Q5TEC3 545 aa26.62■■□□□ 1.85
CDKN2A-212ENST00000578845 MCF2L2Q86YR7 1114 aa26.62■■□□□ 1.85
CDKN2A-212ENST00000578845 SYTL5Q8TDW5 730 aaPredicted RBP26.62■■□□□ 1.85
CDKN2A-212ENST00000578845 MTMR8Q96EF0 704 aa26.62■■□□□ 1.85
CDKN2A-212ENST00000578845 POLR3EQ9NVU0 708 aa26.62■■□□□ 1.85
CDKN2A-212ENST00000578845 GHRHRQ02643 423 aa26.61■■□□□ 1.85
CDKN2A-212ENST00000578845 PPP2R5BQ15173 497 aa26.61■■□□□ 1.85
CDKN2A-212ENST00000578845 FBXO11Q86XK2 927 aa26.61■■□□□ 1.85
CDKN2A-212ENST00000578845 STAG2Q8N3U4 1231 aa26.61■■□□□ 1.85
CDKN2A-212ENST00000578845 MAD2L2Q9UI95 211 aa26.61■■□□□ 1.85
CDKN2A-212ENST00000578845 MRPL11Q9Y3B7 192 aaKnown RBP26.61■■□□□ 1.85
CDKN2A-212ENST00000578845 UNC80Q8N2C7 3258 aa26.61■■□□□ 1.85
CDKN2A-212ENST00000578845 PALM3A6NDB9 673 aaPredicted RBP26.6■■□□□ 1.85
CDKN2A-212ENST00000578845 PURAQ00577 322 aaKnown RBP26.6■■□□□ 1.85
CDKN2A-212ENST00000578845 TMEM199Q8N511 208 aa26.6■■□□□ 1.85
CDKN2A-212ENST00000578845 TBC1D5Q92609 795 aa26.6■■□□□ 1.85
CDKN2A-212ENST00000578845 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.6■■□□□ 1.85
CDKN2A-212ENST00000578845 COL20A1Q9P218 1284 aa26.6■■□□□ 1.85
CDKN2A-212ENST00000578845 EYSQ5T1H1 3165 aa26.59■■□□□ 1.85
CDKN2A-212ENST00000578845 KLRF2D3W0D1 207 aa26.59■■□□□ 1.85
CDKN2A-212ENST00000578845 DHX16O60231 1041 aaKnown RBP26.59■■□□□ 1.85
CDKN2A-212ENST00000578845 PSMC6P62333 389 aa26.59■■□□□ 1.85
CDKN2A-212ENST00000578845 C16orf59Q7L2K0 433 aa26.59■■□□□ 1.85
CDKN2A-212ENST00000578845 OR6J1Q8NGC5 347 aa26.59■■□□□ 1.85
CDKN2A-212ENST00000578845 NSUN6Q8TEA1 469 aaKnown RBP26.59■■□□□ 1.85
CDKN2A-212ENST00000578845 MAP4K1Q92918 833 aa26.59■■□□□ 1.85
CDKN2A-212ENST00000578845 TAF6LQ9Y6J9 622 aa26.59■■□□□ 1.85
CDKN2A-212ENST00000578845 TMEM265A0A087WTH1 108 aa26.58■■□□□ 1.85
CDKN2A-212ENST00000578845 A6NJR5 290 aa26.58■■□□□ 1.85
CDKN2A-212ENST00000578845 E7EWF7 191 aa26.58■■□□□ 1.85
CDKN2A-212ENST00000578845 CSF2RAP15509 400 aa26.58■■□□□ 1.85
CDKN2A-212ENST00000578845 RASIP1Q5U651 963 aa26.58■■□□□ 1.85
CDKN2A-212ENST00000578845 IWS1Q96ST2 819 aa26.58■■□□□ 1.85
CDKN2A-212ENST00000578845 AMNQ9BXJ7 453 aa26.58■■□□□ 1.85
CDKN2A-212ENST00000578845 PPP1R12CQ9BZL4 782 aa26.58■■□□□ 1.85
CDKN2A-212ENST00000578845 VAT1LQ9HCJ6 419 aa26.58■■□□□ 1.85
CDKN2A-212ENST00000578845 OPLAHO14841 1288 aa26.57■■□□□ 1.84
CDKN2A-212ENST00000578845 B4GALT4O60513 344 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms