RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 TNKSO95271 1327 aa11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 TAL1P17542 331 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 MCCP23508 829 aa11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 PABPC4Q13310 644 aaKnown RBP eCLIP11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 SLFN13Q68D06 897 aa11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 TTBK2Q6IQ55 1244 aa11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 LBX2Q6XYB7 198 aa11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 KCTD1Q719H9 257 aa11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 ZNF598Q86UK7 904 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 TRMT44Q8IYL2 757 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 EHBP1Q8NDI1 1231 aa11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 REPS2Q8NFH8 660 aa11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 ZNF592Q92610 1267 aa11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 ZSCAN10Q96SZ4 725 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 PAGR1Q9BTK6 254 aa11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 SH2D4AQ9H788 454 aa11.13□□□□□ -0.63
NPLOC4-219ENST00000576713 PLXNB2O15031 1838 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 FLOT1O75955 427 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 TOP1P11387 765 aaKnown RBP11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 CPA1P15085 419 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 SNAP25P60880 206 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 ERVK-24P63145 666 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 TMEM132BQ14DG7 1078 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 FAM110CQ1W6H9 321 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 CASC1Q6TDU7 716 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 CCDC82Q8N4S0 544 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 ANKS1AQ92625 1134 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 KCNB2Q92953 911 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 GMCL1Q96IK5 515 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 TCEANC2Q96MN5 208 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 LRRC2Q9BYS8 371 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 KRT23Q9C075 422 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 CPVLQ9H3G5 476 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 GABRQQ9UN88 632 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 ADAMTS5Q9UNA0 930 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 TRIM17Q9Y577 477 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 SNX14Q9Y5W7 946 aa11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 COL11A1P12107 1806 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-219ENST00000576713 FRMPD2Q68DX3 1309 aaPredicted RBP11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 WNT7AO00755 349 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 GOLGA8HP0CJ92 632 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 SNHG28P0DPA3 235 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 PDHBP11177 359 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 BMP3P12645 472 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 HSPA4P34932 840 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 SLC16A2P36021 539 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 PSMC4P43686 418 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 GCLCP48506 637 aaPredicted RBP11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 COG2Q14746 738 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 PKN2Q16513 984 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 SLC35G1Q2M3R5 365 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 C8orf34Q49A92 452 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 ZNF697Q5TEC3 545 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 FAM174AQ8TBP5 190 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 IGDCC4Q8TDY8 1250 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 USP26Q9BXU7 913 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 CNNM2Q9H8M5 875 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 EFCC1Q9HA90 598 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 ZNF214Q9UL59 606 aaPredicted RBP11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 PPP1R9AQ9ULJ8 1098 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 SYNPO2Q9UMS6 1093 aa11.11□□□□□ -0.63
NPLOC4-219ENST00000576713 MGAMO43451 1857 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 CCDC85CA6NKD9 419 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 TMEM232C9JQI7 657 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 VWA5AO00534 786 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 PRC1O43663 620 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 PRKCZQ05513 592 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 DGKHQ86XP1 1220 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 NCOA7Q8NI08 942 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 KIFC2Q96AC6 838 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 ERO1AQ96HE7 468 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 TTC14Q96N46 770 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 SLF1Q9BQI6 1058 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 MOV10L1Q9BXT6 1211 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 LY9Q9HBG7 655 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 RABGAP1Q9Y3P9 1069 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 RIPK3Q9Y572 518 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 PTCH2Q9Y6C5 1203 aa11.1□□□□□ -0.63
NPLOC4-219ENST00000576713 SH2B2O14492 632 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 IFIT3O14879 490 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 SIAH2O43255 324 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 SLC1A4P43007 532 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 RGS19P49795 217 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 EXOSC10Q01780 885 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 ZNF543Q08ER8 600 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 TSGA10IPQ3SY00 556 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 FBXO46Q6PJ61 603 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 RALYLQ86SE5 291 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 IQCA1Q86XH1 822 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 STAG2Q8N3U4 1231 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 GPRC5AQ8NFJ5 357 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 CCDC97Q96F63 343 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 MRGPRX2Q96LB1 330 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 MYL10Q9BUA6 226 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 SPATC1LQ9H0A9 340 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 HOXC10Q9NYD6 342 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 GJD2Q9UKL4 321 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 PTPN22Q9Y2R2 807 aa11.09□□□□□ -0.63
NPLOC4-219ENST00000576713 ZNF536O15090 1300 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms