RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 DDX49Q9Y6V7 483 aaKnown RBP13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 TNKSO95271 1327 aa13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 TTC41PQ6P2S7 1318 aa13.78□□□□□ -0.2
CTDNEP1-212ENST00000576613 GTPBP6O43824 516 aaPredicted RBP13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 PTGS1P23219 599 aa13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 SNAP25P60880 206 aa13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 SKIV2LQ15477 1246 aaKnown RBP13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 CCDC96Q2M329 555 aa13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 BRDTQ58F21 947 aaPredicted RBP13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 TMEM67Q5HYA8 995 aa13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 DCAF4Q8WV16 495 aa13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 RAD50Q92878 1312 aa13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 SEC62Q99442 399 aaKnown RBP13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 MPHOSPH6Q99547 160 aaKnown RBP13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 WDR11Q9BZH6 1224 aa13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 DCTPP1Q9H773 170 aa13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 TRMT13Q9NUP7 481 aaKnown RBP13.77□□□□□ -0.21
CTDNEP1-212ENST00000576613 TANC1Q9C0D5 1861 aa13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 CYP2C9P11712 490 aa13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 MYOGP15173 224 aa13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 RFC2P35250 354 aa13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 ALDH5A1P51649 535 aaPredicted RBP13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 PURAQ00577 322 aaKnown RBP13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 ZMYM1Q5SVZ6 1142 aa13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 DEFB128Q7Z7B8 93 aa13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 SLC9A7Q96T83 725 aa13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 MTG1Q9BT17 334 aaPredicted RBP13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 C1QTNF1Q9BXJ1 281 aa13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 RANBP17Q9H2T7 1088 aaKnown RBP13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 MTMR7Q9Y216 660 aa13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
CTDNEP1-212ENST00000576613 PTPDC1A2A3K4 754 aa13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 PITPNM1O00562 1244 aa13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 RANBP6O60518 1105 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 NMT2O60551 498 aa13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 CA3P07451 260 aa13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 MYL3P08590 195 aa13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 BAATQ14032 418 aaPredicted RBP13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 TTLL4Q14679 1199 aa13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 FAM47CQ5HY64 1035 aa13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 TMEM63BQ5T3F8 832 aa13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 C20orf194Q5TEA3 1177 aa13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 OR6J1Q8NGC5 347 aa13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 PURBQ96QR8 312 aaKnown RBP13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 IL17RBQ9NRM6 502 aa13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 PNMA2Q9UL42 364 aa13.75□□□□□ -0.21
CTDNEP1-212ENST00000576613 NFIBO00712 420 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 NKRFO15226 690 aaKnown RBP eCLIP13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 KPNA6O60684 536 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 BMP1P13497 986 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 POU3F3P20264 500 aaPredicted RBP13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 PLA2G5P39877 138 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 TFF2Q03403 129 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 CTDSPL2Q05D32 466 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 PDE4DQ08499 809 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 PPP2R5BQ15173 497 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 SYDE2Q5VT97 1194 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 NFRKBQ6P4R8 1299 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 RASGRP2Q7LDG7 609 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 RETREG2Q8NC44 543 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 PHOSPHO2Q8TCD6 241 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 PI4K2BQ8TCG2 481 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 VWCEQ96DN2 955 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 RAPGEFL1Q9UHV5 662 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 ANAPC4Q9UJX5 808 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 SCN5AQ14524 2016 aa13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 TCF20Q9UGU0 1960 aaKnown RBP13.74□□□□□ -0.21
CTDNEP1-212ENST00000576613 SCN10AQ9Y5Y9 1956 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 RBM47A0AV96 593 aaKnown RBP13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 B4DLN1 442 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 KIF28PB7ZC32 967 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 CALML3P27482 149 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 SLC16A2P36021 539 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 NOVP48745 357 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 MRPL12P52815 198 aaKnown RBP13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 PTPN11Q06124 597 aaPredicted RBP13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 BFSP2Q13515 415 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 NBPF20Q3BBV1 942 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 BTNL9Q6UXG8 535 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 SCFD2Q8WU76 684 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 FAM122AQ96E09 287 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 NECAB3Q96P71 396 aaPredicted RBP13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 COG5Q9UP83 839 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 NOD1Q9Y239 953 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 MTCH2Q9Y6C9 303 aa13.73□□□□□ -0.21
CTDNEP1-212ENST00000576613 ORC4O43929 436 aa13.72□□□□□ -0.21
CTDNEP1-212ENST00000576613 IQCF3P0C7M6 154 aa13.72□□□□□ -0.21
CTDNEP1-212ENST00000576613 TOP1P11387 765 aaKnown RBP13.72□□□□□ -0.21
CTDNEP1-212ENST00000576613 KCNQ1P51787 676 aa13.72□□□□□ -0.21
CTDNEP1-212ENST00000576613 SLC30A10Q6XR72 485 aa13.72□□□□□ -0.21
CTDNEP1-212ENST00000576613 RNF207Q6ZRF8 634 aa13.72□□□□□ -0.21
CTDNEP1-212ENST00000576613 CCDC155Q8N6L0 562 aa13.72□□□□□ -0.21
CTDNEP1-212ENST00000576613 FTOQ9C0B1 505 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTDNEP1-212ENST00000576613 CERS4Q9HA82 394 aa13.72□□□□□ -0.21
CTDNEP1-212ENST00000576613 INCENPQ9NQS7 918 aa13.72□□□□□ -0.21
CTDNEP1-212ENST00000576613 TOMM22Q9NS69 142 aa13.72□□□□□ -0.21
CTDNEP1-212ENST00000576613 FRMPD2Q68DX3 1309 aaPredicted RBP13.71□□□□□ -0.21
CTDNEP1-212ENST00000576613 A6NJR5 290 aa13.71□□□□□ -0.21
CTDNEP1-212ENST00000576613 RFXAPO00287 272 aa13.71□□□□□ -0.21
CTDNEP1-212ENST00000576613 FOXP2O15409 715 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms