RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 FKBP15Q5T1M5 1219 aa19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 TMED8Q6PL24 325 aaPredicted RBP19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 KRT26Q7Z3Y9 468 aa19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 RIN2Q8WYP3 895 aaPredicted RBP19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 CCDC42Q96M95 316 aa19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 TSGA10Q9BZW7 698 aa19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 MKRN1Q9UHC7 482 aaKnown RBP19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 MAST2Q6P0Q8 1798 aa19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 PLEKP08567 350 aaPredicted RBP19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 GOLGA8HP0CJ92 632 aa19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 CCDC96Q2M329 555 aa19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 FIGNQ5HY92 759 aa19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 IQCEQ6IPM2 695 aa19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 CCNI2Q6ZMN8 369 aaPredicted RBP19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 TXNRD3Q86VQ6 643 aa19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 MARCH10Q8NA82 808 aaPredicted RBP19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 CRACR2AQ9BSW2 395 aa19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 SELENOOQ9BVL4 669 aa19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 STX8Q9UNK0 236 aa19.2■□□□□ 0.66
TOM1L1-221ENST00000575882 SMCR8Q8TEV9 937 aaPredicted RBP19.19■□□□□ 0.66
TOM1L1-221ENST00000575882 HPS3Q969F9 1004 aa19.19■□□□□ 0.66
TOM1L1-221ENST00000575882 PALM3A6NDB9 673 aaPredicted RBP19.19■□□□□ 0.66
TOM1L1-221ENST00000575882 GGCXP38435 758 aa19.19■□□□□ 0.66
TOM1L1-221ENST00000575882 PPP1R2P41236 205 aa19.19■□□□□ 0.66
TOM1L1-221ENST00000575882 NAPAP54920 295 aa19.19■□□□□ 0.66
TOM1L1-221ENST00000575882 FNBP4Q8N3X1 1017 aaPredicted RBP19.19■□□□□ 0.66
TOM1L1-221ENST00000575882 SLC44A5Q8NCS7 719 aa19.19■□□□□ 0.66
TOM1L1-221ENST00000575882 SH3RF3Q8TEJ3 882 aaPredicted RBP19.19■□□□□ 0.66
TOM1L1-221ENST00000575882 ANKRD2Q9GZV1 360 aa19.19■□□□□ 0.66
TOM1L1-221ENST00000575882 CPVLQ9H3G5 476 aa19.19■□□□□ 0.66
TOM1L1-221ENST00000575882 TECP42680 631 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 NONOQ15233 471 aaKnown RBP eCLIP19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 SLC10A5Q5PT55 438 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 KRT25Q7Z3Z0 450 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 KIAA0895Q8NCT3 520 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 TMEM47Q9BQJ4 181 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 CDCA7Q9BWT1 371 aaPredicted RBP19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 ZMYND12Q9H0C1 365 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 SNX12Q9UMY4 172 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 MYH1P12882 1939 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 AMPD3Q01432 767 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 TBC1D9BQ66K14 1250 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 SPTY2D1Q68D10 685 aaPredicted RBP19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 CNNM4Q6P4Q7 775 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 ZNF444Q8N0Y2 327 aaPredicted RBP19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 TRIM58Q8NG06 486 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 IFIH1Q9BYX4 1025 aaKnown RBP19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 SEMA6BQ9H3T3 888 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 JRKLQ9Y4A0 524 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 CAPN6Q9Y6Q1 641 aa19.18■□□□□ 0.66
TOM1L1-221ENST00000575882 USO1O60763 962 aaKnown RBP19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 NT5C2P49902 561 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 CCDC70Q6NSX1 233 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 C2CD5Q86YS7 1000 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 SMARCC1Q92922 1105 aaPredicted RBP19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 SLC39A2Q9NP94 309 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 RSPH14Q9UHP6 348 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 PLAGL2Q9UPG8 496 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 CCDC88AQ3V6T2 1871 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 ROBO3Q96MS0 1386 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 KLRF2D3W0D1 207 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 CREG2Q8IUH2 290 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 AMOTL1Q8IY63 956 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 DRC1Q96MC2 740 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 HINFPQ9BQA5 517 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 SH2D4AQ9H788 454 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 MLXIPQ9HAP2 919 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 ARHGAP20Q9P2F6 1191 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 PCDHA13Q9Y5I0 950 aa19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 COL16A1Q07092 1604 aaPredicted RBP19.17■□□□□ 0.66
TOM1L1-221ENST00000575882 ROBO1Q9Y6N7 1651 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 AGPSO00116 658 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 EPHB6O15197 1021 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 TACC1O75410 805 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 SMIM5Q71RC9 77 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 NEK8Q86SG6 692 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 NLRP3Q96P20 1036 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 LZTS2Q9BRK4 669 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 MMTAG2Q9BU76 263 aaKnown RBP19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 FAM207AQ9NSI2 230 aaPredicted RBP19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 SMCO2A6NFE2 343 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 VGLL3A8MV65 326 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 HNRNPH3P31942 346 aaKnown RBP19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 VWA3BQ502W6 1294 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 LINC00116Q8NCU8 138 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 IQCDQ96DY2 449 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 PLEKHA4Q9H4M7 779 aa19.16■□□□□ 0.66
TOM1L1-221ENST00000575882 MOCS3O95396 460 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 KIF11P52732 1056 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 COBLL1Q53SF7 1204 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 CENPPQ6IPU0 288 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 CCDC24Q8N4L8 307 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 MMGT1Q8N4V1 131 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 AENQ8WTP8 325 aaKnown RBP19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 CALML4Q96GE6 196 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 NDST4Q9H3R1 872 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 C6orf50Q9HD87 102 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 FAM184BQ9ULE4 1060 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 SIK3Q9Y2K2 1263 aa19.15■□□□□ 0.66
TOM1L1-221ENST00000575882 SPATA31A1Q5TZJ5 1347 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms