RNA–Protein interactions for RNA: ENST00000575515.1

NDC80-204, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-204ENST00000575515 MBD4O95243 580 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 SUPT20HL2P0C7V6 817 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 ALADP13716 330 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 PTGS1P23219 599 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 MCCP23508 829 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 CNTN2Q02246 1040 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 C12orf60Q5U649 245 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 HERC6Q8IVU3 1022 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 CHST13Q8NET6 341 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 GDPD5Q8WTR4 605 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 VWCEQ96DN2 955 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 DNAJC2Q99543 621 aaKnown RBP11.8□□□□□ -0.52
NDC80-204ENST00000575515 FTOQ9C0B1 505 aaKnown RBP eCLIP11.8□□□□□ -0.52
NDC80-204ENST00000575515 KATNBL1Q9H079 304 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 ALDH8A1Q9H2A2 487 aaPredicted RBP11.8□□□□□ -0.52
NDC80-204ENST00000575515 UBE2ZQ9H832 354 aaPredicted RBP11.8□□□□□ -0.52
NDC80-204ENST00000575515 DIAPH3Q9NSV4 1193 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 ATP8A2Q9NTI2 1148 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 TRMT13Q9NUP7 481 aaKnown RBP11.8□□□□□ -0.52
NDC80-204ENST00000575515 GNEQ9Y223 722 aaKnown RBP11.8□□□□□ -0.52
NDC80-204ENST00000575515 ZNF536O15090 1300 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 TNKSO95271 1327 aa11.8□□□□□ -0.52
NDC80-204ENST00000575515 USP17L12C9JPN9 530 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 USP17L21D6R901 530 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 HIP1O00291 1037 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 GOLIM4O00461 696 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 ATP2A1O14983 1001 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 SMPD1P17405 629 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 KCNJ6P48051 423 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 FAM47CQ5HY64 1035 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 SPRED2Q7Z698 418 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 HSCBQ8IWL3 235 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 FAM178BQ8IXR5 827 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 PHOSPHO2Q8TCD6 241 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 RUFY2Q8WXA3 655 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 ISY1Q9ULR0 285 aaKnown RBP11.79□□□□□ -0.52
NDC80-204ENST00000575515 SCN10AQ9Y5Y9 1956 aa11.79□□□□□ -0.52
NDC80-204ENST00000575515 TCRBV5S4A2TA0A5A2 114 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 ASB14A6NK59 587 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 F5H6K3 240 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 LPXNO60711 386 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 NDUFB10O96000 172 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 ATP5JP18859 108 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 KCNA5P22460 613 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 RFC2P35250 354 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 KLRC3Q07444 240 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.78□□□□□ -0.52
NDC80-204ENST00000575515 EEPD1Q7L9B9 569 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 RETREG2Q8NC44 543 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 FBXL18Q96ME1 805 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 ZBED2Q9BTP6 218 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 USP26Q9BXU7 913 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 BOLA2Q9H3K6 86 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 ACAD9Q9H845 621 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 MTUS1Q9ULD2 1270 aa11.78□□□□□ -0.52
NDC80-204ENST00000575515 ZNF318Q5VUA4 2279 aa11.77□□□□□ -0.52
NDC80-204ENST00000575515 NLRC5Q86WI3 1866 aa11.77□□□□□ -0.53
NDC80-204ENST00000575515 IL9P15248 144 aa11.77□□□□□ -0.53
NDC80-204ENST00000575515 KIAA1211Q6ZU35 1233 aa11.77□□□□□ -0.53
NDC80-204ENST00000575515 FBXO16Q8IX29 292 aaPredicted RBP11.77□□□□□ -0.53
NDC80-204ENST00000575515 STK11IPQ8N1F8 1099 aa11.77□□□□□ -0.53
NDC80-204ENST00000575515 FAM133AQ8N9E0 248 aa11.77□□□□□ -0.53
NDC80-204ENST00000575515 FSD1Q9BTV5 496 aa11.77□□□□□ -0.53
NDC80-204ENST00000575515 SLC38A10Q9HBR0 1119 aa11.77□□□□□ -0.53
NDC80-204ENST00000575515 ANO2Q9NQ90 1003 aa11.77□□□□□ -0.53
NDC80-204ENST00000575515 PDGFCQ9NRA1 345 aa11.77□□□□□ -0.53
NDC80-204ENST00000575515 DDX49Q9Y6V7 483 aaKnown RBP11.77□□□□□ -0.53
NDC80-204ENST00000575515 LCHNA4D1U4 455 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 DCXO43602 365 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 BAIAP3O94812 1187 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 MYL3P08590 195 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 OAZ1P54368 228 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 RABEP1Q15276 862 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 LEXMQ3ZCV2 418 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 IQSEC1Q6DN90 963 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 PTCRAQ6ISU1 281 aaPredicted RBP11.76□□□□□ -0.53
NDC80-204ENST00000575515 KCNH6Q9H252 994 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 A1CFQ9NQ94 594 aaKnown RBP11.76□□□□□ -0.53
NDC80-204ENST00000575515 GPHNQ9NQX3 736 aaPredicted RBP11.76□□□□□ -0.53
NDC80-204ENST00000575515 RNF146Q9NTX7 359 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 POLR3EQ9NVU0 708 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 LMCD1Q9NZU5 365 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 NYAP2Q9P242 653 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 FEM1BQ9UK73 627 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 NOD1Q9Y239 953 aa11.76□□□□□ -0.53
NDC80-204ENST00000575515 SOWAHBA6NEL2 793 aa11.75□□□□□ -0.53
NDC80-204ENST00000575515 EPB41L2O43491 1005 aaKnown RBP11.75□□□□□ -0.53
NDC80-204ENST00000575515 IQCF3P0C7M6 154 aa11.75□□□□□ -0.53
NDC80-204ENST00000575515 IKQ13123 557 aaPredicted RBP11.75□□□□□ -0.53
NDC80-204ENST00000575515 SLFNL1Q499Z3 407 aa11.75□□□□□ -0.53
NDC80-204ENST00000575515 CWC27Q6UX04 472 aaKnown RBP11.75□□□□□ -0.53
NDC80-204ENST00000575515 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.75□□□□□ -0.53
NDC80-204ENST00000575515 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.75□□□□□ -0.53
NDC80-204ENST00000575515 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.75□□□□□ -0.53
NDC80-204ENST00000575515 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.75□□□□□ -0.53
NDC80-204ENST00000575515 MKNK2Q9HBH9 465 aa11.75□□□□□ -0.53
NDC80-204ENST00000575515 CLIP2Q9UDT6 1046 aa11.75□□□□□ -0.53
NDC80-204ENST00000575515 Q9Y3F1 56 aa11.75□□□□□ -0.53
NDC80-204ENST00000575515 SLC4A4Q9Y6R1 1079 aa11.75□□□□□ -0.53
NDC80-204ENST00000575515 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms