RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 ZNF365Q70YC5 407 aa17.4■□□□□ 0.38
NPLOC4-207ENST00000572346 MORC4Q8TE76 937 aa17.4■□□□□ 0.38
NPLOC4-207ENST00000572346 PBX4Q9BYU1 374 aa17.4■□□□□ 0.38
NPLOC4-207ENST00000572346 RANBP17Q9H2T7 1088 aaKnown RBP17.4■□□□□ 0.38
NPLOC4-207ENST00000572346 TOMM22Q9NS69 142 aa17.4■□□□□ 0.38
NPLOC4-207ENST00000572346 Q9Y3F1 56 aa17.4■□□□□ 0.38
NPLOC4-207ENST00000572346 GRIN2DO15399 1336 aa17.4■□□□□ 0.38
NPLOC4-207ENST00000572346 FGAP02671 866 aa17.39■□□□□ 0.37
NPLOC4-207ENST00000572346 PBX2P40425 430 aa17.39■□□□□ 0.37
NPLOC4-207ENST00000572346 BTNL9Q6UXG8 535 aa17.39■□□□□ 0.37
NPLOC4-207ENST00000572346 VTA1Q9NP79 307 aa17.39■□□□□ 0.37
NPLOC4-207ENST00000572346 IL23AQ9NPF7 189 aa17.39■□□□□ 0.37
NPLOC4-207ENST00000572346 UMODL1Q5DID0 1318 aa17.39■□□□□ 0.37
NPLOC4-207ENST00000572346 MYO9BQ13459 2157 aa17.38■□□□□ 0.37
NPLOC4-207ENST00000572346 ZEB2O60315 1214 aa17.38■□□□□ 0.37
NPLOC4-207ENST00000572346 CDC45O75419 566 aa17.38■□□□□ 0.37
NPLOC4-207ENST00000572346 TOP1P11387 765 aaKnown RBP17.38■□□□□ 0.37
NPLOC4-207ENST00000572346 BAATQ14032 418 aaPredicted RBP17.38■□□□□ 0.37
NPLOC4-207ENST00000572346 RRP12Q5JTH9 1297 aaKnown RBP17.38■□□□□ 0.37
NPLOC4-207ENST00000572346 SYDE2Q5VT97 1194 aa17.38■□□□□ 0.37
NPLOC4-207ENST00000572346 KIAA1211Q6ZU35 1233 aa17.38■□□□□ 0.37
NPLOC4-207ENST00000572346 TMEM47Q9BQJ4 181 aa17.38■□□□□ 0.37
NPLOC4-207ENST00000572346 HIPK3Q9H422 1215 aa17.38■□□□□ 0.37
NPLOC4-207ENST00000572346 TCP11L1Q9NUJ3 509 aa17.38■□□□□ 0.37
NPLOC4-207ENST00000572346 CCDC171Q6TFL3 1326 aa17.38■□□□□ 0.37
NPLOC4-207ENST00000572346 NFIBO00712 420 aa17.37■□□□□ 0.37
NPLOC4-207ENST00000572346 B4GALT4O60513 344 aa17.37■□□□□ 0.37
NPLOC4-207ENST00000572346 ALDH5A1P51649 535 aaPredicted RBP17.37■□□□□ 0.37
NPLOC4-207ENST00000572346 PSMC6P62333 389 aa17.37■□□□□ 0.37
NPLOC4-207ENST00000572346 USP38Q8NB14 1042 aa17.37■□□□□ 0.37
NPLOC4-207ENST00000572346 HERVK_113Q902F9 699 aa17.37■□□□□ 0.37
NPLOC4-207ENST00000572346 SEZ6LQ9BYH1 1024 aa17.37■□□□□ 0.37
NPLOC4-207ENST00000572346 GPCPD1Q9NPB8 672 aa17.37■□□□□ 0.37
NPLOC4-207ENST00000572346 ADD3Q9UEY8 706 aaKnown RBP17.37■□□□□ 0.37
NPLOC4-207ENST00000572346 FRMPD2Q68DX3 1309 aaPredicted RBP17.37■□□□□ 0.37
NPLOC4-207ENST00000572346 RAD50Q92878 1312 aa17.37■□□□□ 0.37
NPLOC4-207ENST00000572346 VCANP13611 3396 aa17.36■□□□□ 0.37
NPLOC4-207ENST00000572346 HSPD1P10809 573 aaKnown RBP17.36■□□□□ 0.37
NPLOC4-207ENST00000572346 DUSP28Q4G0W2 176 aa17.36■□□□□ 0.37
NPLOC4-207ENST00000572346 ZNF589Q86UQ0 364 aaPredicted RBP17.36■□□□□ 0.37
NPLOC4-207ENST00000572346 NOC4LQ9BVI4 516 aaKnown RBP17.36■□□□□ 0.37
NPLOC4-207ENST00000572346 TRPV6Q9H1D0 765 aa17.36■□□□□ 0.37
NPLOC4-207ENST00000572346 CXXC1Q9P0U4 656 aaPredicted RBP17.36■□□□□ 0.37
NPLOC4-207ENST00000572346 ZMYM6O95789 1325 aa17.36■□□□□ 0.37
NPLOC4-207ENST00000572346 GBF1Q92538 1859 aa17.35■□□□□ 0.37
NPLOC4-207ENST00000572346 LOC102724159A0A0B4J2E5 919 aa17.35■□□□□ 0.37
NPLOC4-207ENST00000572346 PTPDC1A2A3K4 754 aa17.35■□□□□ 0.37
NPLOC4-207ENST00000572346 FGBP02675 491 aa17.35■□□□□ 0.37
NPLOC4-207ENST00000572346 PDHBP11177 359 aa17.35■□□□□ 0.37
NPLOC4-207ENST00000572346 CCL23P55773 120 aa17.35■□□□□ 0.37
NPLOC4-207ENST00000572346 HAND2P61296 217 aa17.35■□□□□ 0.37
NPLOC4-207ENST00000572346 PWP2Q15269 919 aaKnown RBP17.35■□□□□ 0.37
NPLOC4-207ENST00000572346 WNT8AQ9H1J5 351 aa17.35■□□□□ 0.37
NPLOC4-207ENST00000572346 SLC30A10Q6XR72 485 aa17.34■□□□□ 0.37
NPLOC4-207ENST00000572346 CLEC4DQ8WXI8 215 aa17.34■□□□□ 0.37
NPLOC4-207ENST00000572346 TTC14Q96N46 770 aa17.34■□□□□ 0.37
NPLOC4-207ENST00000572346 GAS2L1Q99501 681 aaPredicted RBP17.34■□□□□ 0.37
NPLOC4-207ENST00000572346 WDR11Q9BZH6 1224 aa17.34■□□□□ 0.37
NPLOC4-207ENST00000572346 MTIF3Q9H2K0 278 aaKnown RBP17.34■□□□□ 0.37
NPLOC4-207ENST00000572346 PRDM12Q9H4Q4 367 aa17.34■□□□□ 0.37
NPLOC4-207ENST00000572346 RBM47A0AV96 593 aaKnown RBP17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 SNHG28P0DPA3 235 aa17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 CALML3P27482 149 aa17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 ZNF543Q08ER8 600 aa17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 RAB30Q15771 203 aa17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 AKNAD1Q5T1N1 836 aa17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 RNF207Q6ZRF8 634 aa17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 MFSD6Q6ZSS7 791 aa17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 OTOP2Q7RTS6 562 aa17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 ESYT1Q9BSJ8 1104 aa17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 ALDH8A1Q9H2A2 487 aaPredicted RBP17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 POLR3EQ9NVU0 708 aa17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 MSRAQ9UJ68 235 aa17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 PNMA2Q9UL42 364 aa17.33■□□□□ 0.36
NPLOC4-207ENST00000572346 SGSM2O43147 1006 aa17.32■□□□□ 0.36
NPLOC4-207ENST00000572346 PCP11498 1178 aaKnown RBP17.32■□□□□ 0.36
NPLOC4-207ENST00000572346 RPS6P62753 249 aaKnown RBP17.32■□□□□ 0.36
NPLOC4-207ENST00000572346 PURAQ00577 322 aaKnown RBP17.32■□□□□ 0.36
NPLOC4-207ENST00000572346 TBC1D10CQ8IV04 446 aa17.32■□□□□ 0.36
NPLOC4-207ENST00000572346 SYMPKQ92797 1274 aaKnown RBP17.32■□□□□ 0.36
NPLOC4-207ENST00000572346 VWCEQ96DN2 955 aa17.32■□□□□ 0.36
NPLOC4-207ENST00000572346 SCLYQ96I15 445 aa17.32■□□□□ 0.36
NPLOC4-207ENST00000572346 TTC28Q96AY4 2481 aa17.32■□□□□ 0.36
NPLOC4-207ENST00000572346 SCN10AQ9Y5Y9 1956 aa17.31■□□□□ 0.36
NPLOC4-207ENST00000572346 CHD9Q3L8U1 2897 aa17.31■□□□□ 0.36
NPLOC4-207ENST00000572346 WDR19Q8NEZ3 1342 aa17.31■□□□□ 0.36
NPLOC4-207ENST00000572346 MYL3P08590 195 aa17.31■□□□□ 0.36
NPLOC4-207ENST00000572346 CPT1AP50416 773 aa17.31■□□□□ 0.36
NPLOC4-207ENST00000572346 RPUSD2Q8IZ73 545 aaKnown RBP17.31■□□□□ 0.36
NPLOC4-207ENST00000572346 OR6J1Q8NGC5 347 aa17.31■□□□□ 0.36
NPLOC4-207ENST00000572346 NKX2-4Q9H2Z4 354 aa17.31■□□□□ 0.36
NPLOC4-207ENST00000572346 PRDM6Q9NQX0 595 aa17.31■□□□□ 0.36
NPLOC4-207ENST00000572346 TRMT13Q9NUP7 481 aaKnown RBP17.31■□□□□ 0.36
NPLOC4-207ENST00000572346 YBX2Q9Y2T7 364 aaKnown RBP17.31■□□□□ 0.36
NPLOC4-207ENST00000572346 SPTBN5Q9NRC6 3674 aaKnown RBP17.3■□□□□ 0.36
NPLOC4-207ENST00000572346 TNKSO95271 1327 aa17.3■□□□□ 0.36
NPLOC4-207ENST00000572346 NEDD4P46934 1319 aa17.3■□□□□ 0.36
NPLOC4-207ENST00000572346 SUPT20HL2P0C7V6 817 aa17.3■□□□□ 0.36
NPLOC4-207ENST00000572346 CYP2C9P11712 490 aa17.3■□□□□ 0.36
NPLOC4-207ENST00000572346 EDNRBP24530 442 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms