RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 GK5Q6ZS86 529 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 HS2ST1Q7LGA3 356 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 WAPLQ7Z5K2 1190 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 TMC3Q7Z5M5 1100 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 FBXO15Q8NCQ5 510 aaPredicted RBP6.91□□□□□ -1.3
KARSP3-201ENST00000571212 PDZD8Q8NEN9 1154 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 ZNF512BQ96KM6 892 aaPredicted RBP6.91□□□□□ -1.3
KARSP3-201ENST00000571212 STK26Q9P289 416 aa6.91□□□□□ -1.3
KARSP3-201ENST00000571212 SPATA31E1Q6ZUB1 1445 aa6.9□□□□□ -1.3
KARSP3-201ENST00000571212 ATE1O95260 518 aa6.9□□□□□ -1.31
KARSP3-201ENST00000571212 CHMP4BP1P59074 171 aa6.9□□□□□ -1.31
KARSP3-201ENST00000571212 SPOCD1Q6ZMY3 1216 aa6.9□□□□□ -1.31
KARSP3-201ENST00000571212 KRT28Q7Z3Y7 464 aa6.9□□□□□ -1.31
KARSP3-201ENST00000571212 MPHOSPH9Q99550 1183 aa6.9□□□□□ -1.31
KARSP3-201ENST00000571212 GMIPQ9P107 970 aa6.9□□□□□ -1.31
KARSP3-201ENST00000571212 SRCAPQ6ZRS2 3230 aa6.9□□□□□ -1.31
KARSP3-201ENST00000571212 PLCH1Q4KWH8 1693 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 PLEKHH1Q9ULM0 1364 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 PIK3C2GO75747 1445 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 TNS3Q68CZ2 1445 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 YTHDC2Q9H6S0 1430 aaKnown RBP6.89□□□□□ -1.31
KARSP3-201ENST00000571212 TSPAN15O95858 294 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 CFPP27918 469 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 MCM4P33991 863 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 NMIQ13287 307 aaPredicted RBP6.89□□□□□ -1.31
KARSP3-201ENST00000571212 VPS72Q15906 364 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 RGL3Q3MIN7 710 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 TMEM132EQ6IEE7 984 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 BHLHE22Q8NFJ8 381 aaPredicted RBP6.89□□□□□ -1.31
KARSP3-201ENST00000571212 ATG4CQ96DT6 458 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 PCGF6Q9BYE7 350 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 EPB41L4BQ9H329 900 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 EHMT1Q9H9B1 1298 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 MINPP1Q9UNW1 487 aa6.89□□□□□ -1.31
KARSP3-201ENST00000571212 ABCA3Q99758 1704 aa6.88□□□□□ -1.31
KARSP3-201ENST00000571212 APOBRQ0VD83 1088 aa6.88□□□□□ -1.31
KARSP3-201ENST00000571212 NBPF12Q5TAG4 269 aaPredicted RBP6.88□□□□□ -1.31
KARSP3-201ENST00000571212 OXR1Q8N573 874 aa6.88□□□□□ -1.31
KARSP3-201ENST00000571212 USHBP1Q8N6Y0 703 aa6.88□□□□□ -1.31
KARSP3-201ENST00000571212 TMEM87AQ8NBN3 555 aa6.88□□□□□ -1.31
KARSP3-201ENST00000571212 HDAC8Q9BY41 377 aa6.88□□□□□ -1.31
KARSP3-201ENST00000571212 SBNO1A3KN83 1393 aa6.88□□□□□ -1.31
KARSP3-201ENST00000571212 LRP5O75197 1615 aa6.87□□□□□ -1.31
KARSP3-201ENST00000571212 NRXN1Q9ULB1 1477 aa6.87□□□□□ -1.31
KARSP3-201ENST00000571212 PSPNO60542 156 aa6.87□□□□□ -1.31
KARSP3-201ENST00000571212 EFEMP2O95967 443 aa6.87□□□□□ -1.31
KARSP3-201ENST00000571212 ZNF16P17020 682 aaPredicted RBP6.87□□□□□ -1.31
KARSP3-201ENST00000571212 NBPF9Q3BBW0 867 aa6.87□□□□□ -1.31
KARSP3-201ENST00000571212 LCE4AQ5TA78 99 aa6.87□□□□□ -1.31
KARSP3-201ENST00000571212 CDCP2Q5VXM1 449 aa6.87□□□□□ -1.31
KARSP3-201ENST00000571212 DEFB132Q7Z7B7 95 aa6.87□□□□□ -1.31
KARSP3-201ENST00000571212 C1QL4Q86Z23 238 aa6.87□□□□□ -1.31
KARSP3-201ENST00000571212 EAF1Q96JC9 268 aaPredicted RBP6.87□□□□□ -1.31
KARSP3-201ENST00000571212 PPP1R16BQ96T49 567 aa6.87□□□□□ -1.31
KARSP3-201ENST00000571212 FOXP3Q9BZS1 431 aa6.87□□□□□ -1.31
KARSP3-201ENST00000571212 CNNM2Q9H8M5 875 aa6.87□□□□□ -1.31
KARSP3-201ENST00000571212 ARHGEF10O15013 1369 aa6.87□□□□□ -1.31
KARSP3-201ENST00000571212 DHX57Q6P158 1386 aaKnown RBP6.87□□□□□ -1.31
KARSP3-201ENST00000571212 ETV2O00321 342 aaPredicted RBP6.86□□□□□ -1.31
KARSP3-201ENST00000571212 RPL10P27635 214 aaKnown RBP6.86□□□□□ -1.31
KARSP3-201ENST00000571212 LCE1DQ5T752 114 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 KRT27Q7Z3Y8 459 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 SIRT2Q8IXJ6 389 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 LINC01599Q8WXQ3 324 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 DHX38Q92620 1227 aaKnown RBP6.86□□□□□ -1.31
KARSP3-201ENST00000571212 TCTN2Q96GX1 697 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 G6PC3Q9BUM1 346 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 ASCC2Q9H1I8 757 aaPredicted RBP6.86□□□□□ -1.31
KARSP3-201ENST00000571212 C14orf93Q9H972 538 aaKnown RBP6.86□□□□□ -1.31
KARSP3-201ENST00000571212 GPR160Q9UJ42 338 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 ZNF281Q9Y2X9 895 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 NRAPQ86VF7 1730 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 FITM1A5D6W6 292 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 NFIBO00712 420 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 TMEM253P0C7T8 217 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 ZPBP2Q6X784 338 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 ATG14Q6ZNE5 492 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 NLRC3Q7RTR2 1065 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 TMEM192Q8IY95 271 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 LRRC56Q8IYG6 542 aaPredicted RBP6.86□□□□□ -1.31
KARSP3-201ENST00000571212 SYTL5Q8TDW5 730 aaPredicted RBP6.86□□□□□ -1.31
KARSP3-201ENST00000571212 KCNN1Q92952 543 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 NKD1Q969G9 470 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 SYTL4Q96C24 671 aaPredicted RBP6.86□□□□□ -1.31
KARSP3-201ENST00000571212 PRDM14Q9GZV8 571 aa6.86□□□□□ -1.31
KARSP3-201ENST00000571212 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.86□□□□□ -1.31
KARSP3-201ENST00000571212 ANKARQ7Z5J8 1434 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 DLC1Q96QB1 1528 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 FAM83GA6ND36 823 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 FAM86C2PA6NEL3 165 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 NOTOA8MTQ0 251 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 NPIPB6E9PJ23 425 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 FKTNO75072 461 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 PRAMEF1O95521 474 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 RNF4P78317 190 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 NR0B2Q15466 257 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 FBLN7Q53RD9 439 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 TMCO4Q5TGY1 634 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 LCNL1Q6ZST4 164 aa6.85□□□□□ -1.31
KARSP3-201ENST00000571212 LILRA2Q8N149 483 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 1105.8 ms