RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 CNTN2Q02246 1040 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 ACVR2BQ13705 512 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 NBR1Q14596 966 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 SEC23AQ15436 765 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 ANO1Q5XXA6 986 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 TTBK2Q6IQ55 1244 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 ANKRD33Q7Z3H0 272 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 CCDC144CPQ8IYA2 1237 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 ENAHQ8N8S7 591 aaPredicted RBP8.07□□□□□ -1.12
SPG11-224ENST00000561268 CLEC4DQ8WXI8 215 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 DDX11Q96FC9 970 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 TBC1D32Q96NH3 1257 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 SENP6Q9GZR1 1112 aaPredicted RBP8.07□□□□□ -1.12
SPG11-224ENST00000561268 GNEQ9Y223 722 aaKnown RBP8.07□□□□□ -1.12
SPG11-224ENST00000561268 CDH23Q9H251 3354 aa8.07□□□□□ -1.12
SPG11-224ENST00000561268 ELP1O95163 1332 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 TNKSO95271 1327 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 COL6A3P12111 3177 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 RBM47A0AV96 593 aaKnown RBP8.06□□□□□ -1.12
SPG11-224ENST00000561268 ASB14A6NK59 587 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 B4E1Z4 1266 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 NFIBO00712 420 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 ZNF213O14771 459 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 KIAA0355O15063 1070 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 SGSM2O43147 1006 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 KDM4AO75164 1064 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 PGK1P00558 417 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 HOXB3P14651 431 aaPredicted RBP8.06□□□□□ -1.12
SPG11-224ENST00000561268 PTMSP20962 102 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 CHMLP26374 656 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 IMMTQ16891 758 aaKnown RBP8.06□□□□□ -1.12
SPG11-224ENST00000561268 CCDC96Q2M329 555 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 CCDC144BQ3MJ40 725 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 TRIM60Q495X7 471 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 ASPRV1Q53RT3 343 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 CCDC178Q5BJE1 867 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 RRP12Q5JTH9 1297 aaKnown RBP8.06□□□□□ -1.12
SPG11-224ENST00000561268 RNF180Q86T96 592 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 IQCA1Q86XH1 822 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 ZNF710Q8N1W2 664 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 ANKRD35Q8N283 1001 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 SLC43A3Q8NBI5 491 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 PNMA1Q8ND90 353 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 RNF166Q96A37 237 aaPredicted RBP8.06□□□□□ -1.12
SPG11-224ENST00000561268 MTMR8Q96EF0 704 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 TOX2Q96NM4 488 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 TRERF1Q96PN7 1200 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 CNNM2Q9H8M5 875 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 VTA1Q9NP79 307 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 HOMER2Q9NSB8 354 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 TBX21Q9UL17 535 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 FAM184BQ9ULE4 1060 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 CCPG1Q9ULG6 757 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 LAMA2P24043 3122 aaKnown RBP8.06□□□□□ -1.12
SPG11-224ENST00000561268 NLRC5Q86WI3 1866 aa8.06□□□□□ -1.12
SPG11-224ENST00000561268 FRMPD2Q68DX3 1309 aaPredicted RBP8.05□□□□□ -1.12
SPG11-224ENST00000561268 MYH9P35579 1960 aaKnown RBP8.05□□□□□ -1.12
SPG11-224ENST00000561268 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.05□□□□□ -1.12
SPG11-224ENST00000561268 CYP21A2P08686 494 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 ALAS1P13196 640 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 SLC16A2P36021 539 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 ADCYAP1R1P41586 468 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 CDK7P50613 346 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 ALDH5A1P51649 535 aaPredicted RBP8.05□□□□□ -1.12
SPG11-224ENST00000561268 ACLYP53396 1101 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 TAPT1Q6NXT6 567 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 SLC30A10Q6XR72 485 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 RGS22Q8NE09 1264 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 DNERQ8NFT8 737 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 LRCH3Q96II8 777 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 ZSCAN10Q96SZ4 725 aaPredicted RBP8.05□□□□□ -1.12
SPG11-224ENST00000561268 KRT23Q9C075 422 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 TOMM22Q9NS69 142 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 ZSWIM5Q9P217 1185 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 CTNNA3Q9UI47 895 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 ZHX1Q9UKY1 873 aaPredicted RBP8.05□□□□□ -1.12
SPG11-224ENST00000561268 Q9Y3F1 56 aa8.05□□□□□ -1.12
SPG11-224ENST00000561268 CTDP1Q9Y5B0 961 aaPredicted RBP8.05□□□□□ -1.12
SPG11-224ENST00000561268 FRMPD4Q14CM0 1322 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 MROH7Q68CQ1 1323 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 RALGAPA2Q2PPJ7 1873 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 TRIM43BA6NCK2 446 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 OPLAHO14841 1288 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 CLTBP09497 229 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 ITGB8P26012 769 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 SNAP25P60880 206 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 PTH1RQ03431 593 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 TLE2Q04725 743 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 FAAP100Q0VG06 881 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 IKQ13123 557 aaPredicted RBP8.04□□□□□ -1.12
SPG11-224ENST00000561268 CDC37Q16543 378 aaPredicted RBP8.04□□□□□ -1.12
SPG11-224ENST00000561268 SLC35G1Q2M3R5 365 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 CCDC174Q6PII3 467 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 STOX1Q6ZVD7 989 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 TLK2Q86UE8 772 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 FBXO16Q8IX29 292 aaPredicted RBP8.04□□□□□ -1.12
SPG11-224ENST00000561268 FAM126BQ8IXS8 530 aa8.04□□□□□ -1.12
SPG11-224ENST00000561268 MB21D2Q8IYB1 491 aaPredicted RBP8.04□□□□□ -1.12
SPG11-224ENST00000561268 PCSK9Q8NBP7 692 aaKnown RBP8.04□□□□□ -1.12
SPG11-224ENST00000561268 TRIM43Q96BQ3 446 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 235.6 ms