RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 TBCKQ8TEA7 893 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 AGBL1Q96MI9 1066 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 MBOAT7Q96N66 472 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 GBA2Q9HCG7 927 aaPredicted RBP12.88□□□□□ -0.35
SNX1-212ENST00000560861 HPSEQ9Y251 543 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 LCTP09848 1927 aa12.88□□□□□ -0.35
SNX1-212ENST00000560861 SPDYE16A6NNV3 312 aaPredicted RBP12.87□□□□□ -0.35
SNX1-212ENST00000560861 OAZ1P54368 228 aa12.87□□□□□ -0.35
SNX1-212ENST00000560861 PTGDRQ13258 359 aa12.87□□□□□ -0.35
SNX1-212ENST00000560861 SNW1Q13573 536 aaKnown RBP12.87□□□□□ -0.35
SNX1-212ENST00000560861 COG2Q14746 738 aa12.87□□□□□ -0.35
SNX1-212ENST00000560861 IL17AQ16552 155 aa12.87□□□□□ -0.35
SNX1-212ENST00000560861 LBX2Q6XYB7 198 aa12.87□□□□□ -0.35
SNX1-212ENST00000560861 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
SNX1-212ENST00000560861 MRPS27Q92552 414 aaKnown RBP12.87□□□□□ -0.35
SNX1-212ENST00000560861 TBC1D5Q92609 795 aa12.87□□□□□ -0.35
SNX1-212ENST00000560861 OPTNQ96CV9 577 aa12.87□□□□□ -0.35
SNX1-212ENST00000560861 CLIC6Q96NY7 704 aa12.87□□□□□ -0.35
SNX1-212ENST00000560861 ANO3Q9BYT9 981 aa12.87□□□□□ -0.35
SNX1-212ENST00000560861 TMEM60Q9H2L4 133 aa12.87□□□□□ -0.35
SNX1-212ENST00000560861 RAVER2Q9HCJ3 691 aaKnown RBP12.87□□□□□ -0.35
SNX1-212ENST00000560861 PNMA2Q9UL42 364 aa12.87□□□□□ -0.35
SNX1-212ENST00000560861 ZNF214Q9UL59 606 aaPredicted RBP12.87□□□□□ -0.35
SNX1-212ENST00000560861 MRPL11Q9Y3B7 192 aaKnown RBP12.87□□□□□ -0.35
SNX1-212ENST00000560861 GOLGA6L4A6NEF3 574 aa12.86□□□□□ -0.35
SNX1-212ENST00000560861 ZBED4O75132 1171 aa12.86□□□□□ -0.35
SNX1-212ENST00000560861 NR1I2O75469 434 aa12.86□□□□□ -0.35
SNX1-212ENST00000560861 FOSP01100 380 aaPredicted RBP12.86□□□□□ -0.35
SNX1-212ENST00000560861 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
SNX1-212ENST00000560861 SREBF1P36956 1147 aa12.86□□□□□ -0.35
SNX1-212ENST00000560861 HSD17B4P51659 736 aa12.86□□□□□ -0.35
SNX1-212ENST00000560861 ZNF445P59923 1031 aa12.86□□□□□ -0.35
SNX1-212ENST00000560861 FAM160A1Q05DH4 1040 aa12.86□□□□□ -0.35
SNX1-212ENST00000560861 CST9Q5W186 159 aa12.86□□□□□ -0.35
SNX1-212ENST00000560861 ARL6IP4Q66PJ3 421 aaKnown RBP12.86□□□□□ -0.35
SNX1-212ENST00000560861 GPAT2Q6NUI2 795 aa12.86□□□□□ -0.35
SNX1-212ENST00000560861 MOXD1Q6UVY6 613 aa12.86□□□□□ -0.35
SNX1-212ENST00000560861 FMR1NBQ8N0W7 255 aaPredicted RBP12.86□□□□□ -0.35
SNX1-212ENST00000560861 FERMT2Q96AC1 680 aa12.86□□□□□ -0.35
SNX1-212ENST00000560861 CCPG1Q9ULG6 757 aa12.86□□□□□ -0.35
SNX1-212ENST00000560861 PASKQ96RG2 1323 aa12.86□□□□□ -0.35
SNX1-212ENST00000560861 CYP3A7-CYP3A51PA0A087WV96 503 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 LAD1O00515 517 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 CELF2O95319 508 aaKnown RBP12.85□□□□□ -0.35
SNX1-212ENST00000560861 TDP2O95551 362 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 CYP3A7P24462 503 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 MCM7P33993 719 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 PRPHP41219 470 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 ZSCAN23Q3MJ62 389 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 MUM1L1Q5H9M0 696 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 CCDC183Q5T5S1 534 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 PPP4R3AQ6IN85 833 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 RBM43Q6ZSC3 357 aaKnown RBP12.85□□□□□ -0.35
SNX1-212ENST00000560861 SAMD3Q8N6K7 520 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 CLSTN2Q9H4D0 955 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 ZNF408Q9H9D4 720 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 DDX19AQ9NUU7 478 aaKnown RBP12.85□□□□□ -0.35
SNX1-212ENST00000560861 DACT1Q9NYF0 836 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 AGTPBP1Q9UPW5 1226 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 FRMPD4Q14CM0 1322 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 RPTORQ8N122 1335 aa12.85□□□□□ -0.35
SNX1-212ENST00000560861 A0A1B0GVL5 298 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 GCOM1H8Y6P7 765 aaPredicted RBP12.84□□□□□ -0.35
SNX1-212ENST00000560861 NFIBO00712 420 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 SLC37A4O43826 429 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 ABCB7O75027 752 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 CYP3A4P08684 503 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 POLR2MP0CAP2 368 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 PFKFB1P16118 471 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 GCFC2P16383 781 aaKnown RBP12.84□□□□□ -0.35
SNX1-212ENST00000560861 HOXA13P31271 388 aaPredicted RBP12.84□□□□□ -0.35
SNX1-212ENST00000560861 CIITAP33076 1130 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 USP11P51784 963 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 NDUFA8P51970 172 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 TMEM132BQ14DG7 1078 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 LETM2Q2VYF4 491 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 GADL1Q6ZQY3 521 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 USP49Q70CQ1 688 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 SYAP1Q96A49 352 aaPredicted RBP12.84□□□□□ -0.35
SNX1-212ENST00000560861 SLC10A4Q96EP9 437 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 MS4A4AQ96JQ5 239 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 MTMR9Q96QG7 549 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 MAF1Q9H063 256 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 GZF1Q9H116 711 aaPredicted RBP12.84□□□□□ -0.35
SNX1-212ENST00000560861 CSRNP2Q9H175 543 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 HOXC10Q9NYD6 342 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 COL20A1Q9P218 1284 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 RIPK3Q9Y572 518 aa12.84□□□□□ -0.35
SNX1-212ENST00000560861 CNMDO75829 334 aa12.83□□□□□ -0.36
SNX1-212ENST00000560861 OR52Z1P0C646 297 aa12.83□□□□□ -0.36
SNX1-212ENST00000560861 ALAS1P13196 640 aa12.83□□□□□ -0.36
SNX1-212ENST00000560861 ARHGAP4P98171 946 aa12.83□□□□□ -0.36
SNX1-212ENST00000560861 SNAPC2Q13487 334 aa12.83□□□□□ -0.36
SNX1-212ENST00000560861 TKFCQ3LXA3 575 aa12.83□□□□□ -0.36
SNX1-212ENST00000560861 TPRNQ4KMQ1 711 aa12.83□□□□□ -0.36
SNX1-212ENST00000560861 CCDC73Q6ZRK6 1079 aa12.83□□□□□ -0.36
SNX1-212ENST00000560861 CPXCR1Q8N123 301 aa12.83□□□□□ -0.36
SNX1-212ENST00000560861 C2orf69Q8N8R5 385 aa12.83□□□□□ -0.36
SNX1-212ENST00000560861 ASCC2Q9H1I8 757 aaPredicted RBP12.83□□□□□ -0.36
SNX1-212ENST00000560861 RNF146Q9NTX7 359 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms