RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 SMPD1P17405 629 aa20.99■□□□□ 0.95
TNFAIP2-206ENST00000560428 EDNRBP24530 442 aa20.99■□□□□ 0.95
TNFAIP2-206ENST00000560428 IRX5P78411 483 aaPredicted RBP20.99■□□□□ 0.95
TNFAIP2-206ENST00000560428 SART3Q15020 963 aaKnown RBP20.99■□□□□ 0.95
TNFAIP2-206ENST00000560428 QRICH1Q2TAL8 776 aa20.99■□□□□ 0.95
TNFAIP2-206ENST00000560428 NOL8Q76FK4 1167 aaKnown RBP20.99■□□□□ 0.95
TNFAIP2-206ENST00000560428 EEPD1Q7L9B9 569 aa20.99■□□□□ 0.95
TNFAIP2-206ENST00000560428 TRIM43Q96BQ3 446 aaPredicted RBP20.99■□□□□ 0.95
TNFAIP2-206ENST00000560428 AP5M1Q9H0R1 490 aa20.99■□□□□ 0.95
TNFAIP2-206ENST00000560428 JMJD4Q9H9V9 463 aa20.99■□□□□ 0.95
TNFAIP2-206ENST00000560428 PDGFCQ9NRA1 345 aa20.99■□□□□ 0.95
TNFAIP2-206ENST00000560428 RBM8AQ9Y5S9 174 aaKnown RBP20.99■□□□□ 0.95
TNFAIP2-206ENST00000560428 A0A0U1RQG5 324 aaPredicted RBP20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 RBM47A0AV96 593 aaKnown RBP20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 DCDC2CA8MYV0 355 aa20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 B4DLN1 442 aa20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 IFIT3O14879 490 aaKnown RBP20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 KIAA0355O15063 1070 aa20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 DHX16O60231 1041 aaKnown RBP20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 PQBP1O60828 265 aaKnown RBP20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 MRPL12P52815 198 aaKnown RBP20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 KIAA1211Q6ZU35 1233 aa20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 SH3RF1Q7Z6J0 888 aa20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 FBXO11Q86XK2 927 aa20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 LRCH3Q96II8 777 aa20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 TAF6LQ9Y6J9 622 aa20.98■□□□□ 0.95
TNFAIP2-206ENST00000560428 PALM3A6NDB9 673 aaPredicted RBP20.97■□□□□ 0.95
TNFAIP2-206ENST00000560428 KLRF2D3W0D1 207 aa20.97■□□□□ 0.95
TNFAIP2-206ENST00000560428 CABYRO75952 493 aa20.97■□□□□ 0.95
TNFAIP2-206ENST00000560428 CDK7P50613 346 aa20.97■□□□□ 0.95
TNFAIP2-206ENST00000560428 FSCN1Q16658 493 aaKnown RBP20.97■□□□□ 0.95
TNFAIP2-206ENST00000560428 DUSP28Q4G0W2 176 aa20.97■□□□□ 0.95
TNFAIP2-206ENST00000560428 BMP2KLQ5H9B9 411 aa20.97■□□□□ 0.95
TNFAIP2-206ENST00000560428 STOX1Q6ZVD7 989 aa20.97■□□□□ 0.95
TNFAIP2-206ENST00000560428 MCF2L2Q86YR7 1114 aa20.97■□□□□ 0.95
TNFAIP2-206ENST00000560428 STAG2Q8N3U4 1231 aa20.97■□□□□ 0.95
TNFAIP2-206ENST00000560428 BADQ92934 168 aa20.97■□□□□ 0.95
TNFAIP2-206ENST00000560428 MAD2L2Q9UI95 211 aa20.97■□□□□ 0.95
TNFAIP2-206ENST00000560428 MRPL11Q9Y3B7 192 aaKnown RBP20.97■□□□□ 0.95
TNFAIP2-206ENST00000560428 ZEB2O60315 1214 aa20.96■□□□□ 0.95
TNFAIP2-206ENST00000560428 BEX3Q00994 111 aa20.96■□□□□ 0.95
TNFAIP2-206ENST00000560428 PDE4DQ08499 809 aa20.96■□□□□ 0.95
TNFAIP2-206ENST00000560428 FAAP100Q0VG06 881 aa20.96■□□□□ 0.95
TNFAIP2-206ENST00000560428 GRM4Q14833 912 aa20.96■□□□□ 0.95
TNFAIP2-206ENST00000560428 WTAPQ15007 396 aa20.96■□□□□ 0.95
TNFAIP2-206ENST00000560428 MB21D2Q8IYB1 491 aaPredicted RBP20.96■□□□□ 0.95
TNFAIP2-206ENST00000560428 MTMR8Q96EF0 704 aa20.96■□□□□ 0.95
TNFAIP2-206ENST00000560428 ESYT1Q9BSJ8 1104 aa20.96■□□□□ 0.95
TNFAIP2-206ENST00000560428 SEZ6LQ9BYH1 1024 aa20.96■□□□□ 0.95
TNFAIP2-206ENST00000560428 LSG1Q9H089 658 aaKnown RBP20.96■□□□□ 0.95
TNFAIP2-206ENST00000560428 ARVCFO00192 962 aa20.95■□□□□ 0.94
TNFAIP2-206ENST00000560428 DYNC1LI2O43237 492 aaPredicted RBP20.95■□□□□ 0.94
TNFAIP2-206ENST00000560428 VTI1AQ96AJ9 217 aa20.95■□□□□ 0.94
TNFAIP2-206ENST00000560428 MTA3Q9BTC8 594 aa20.95■□□□□ 0.94
TNFAIP2-206ENST00000560428 AMNQ9BXJ7 453 aa20.95■□□□□ 0.94
TNFAIP2-206ENST00000560428 WDR11Q9BZH6 1224 aa20.95■□□□□ 0.94
TNFAIP2-206ENST00000560428 VAT1LQ9HCJ6 419 aa20.95■□□□□ 0.94
TNFAIP2-206ENST00000560428 TMEM39AQ9NV64 488 aa20.95■□□□□ 0.94
TNFAIP2-206ENST00000560428 ZBTB5O15062 677 aa20.94■□□□□ 0.94
TNFAIP2-206ENST00000560428 NKRFO15226 690 aaKnown RBP eCLIP20.94■□□□□ 0.94
TNFAIP2-206ENST00000560428 RAG1P15918 1043 aa20.94■□□□□ 0.94
TNFAIP2-206ENST00000560428 ANTXR2P58335 489 aa20.94■□□□□ 0.94
TNFAIP2-206ENST00000560428 TROAPQ12815 778 aa20.94■□□□□ 0.94
TNFAIP2-206ENST00000560428 SYTL5Q8TDW5 730 aaPredicted RBP20.94■□□□□ 0.94
TNFAIP2-206ENST00000560428 SCFD2Q8WU76 684 aa20.94■□□□□ 0.94
TNFAIP2-206ENST00000560428 ITGB8P26012 769 aa20.93■□□□□ 0.94
TNFAIP2-206ENST00000560428 GHRHRQ02643 423 aa20.93■□□□□ 0.94
TNFAIP2-206ENST00000560428 TRAF1Q13077 416 aa20.93■□□□□ 0.94
TNFAIP2-206ENST00000560428 TMEM67Q5HYA8 995 aa20.93■□□□□ 0.94
TNFAIP2-206ENST00000560428 TMEM63BQ5T3F8 832 aa20.93■□□□□ 0.94
TNFAIP2-206ENST00000560428 CXCL17Q6UXB2 119 aa20.93■□□□□ 0.94
TNFAIP2-206ENST00000560428 SLC43A3Q8NBI5 491 aa20.93■□□□□ 0.94
TNFAIP2-206ENST00000560428 IGDCC4Q8TDY8 1250 aa20.93■□□□□ 0.94
TNFAIP2-206ENST00000560428 NSUN6Q8TEA1 469 aaKnown RBP20.93■□□□□ 0.94
TNFAIP2-206ENST00000560428 TBX21Q9UL17 535 aa20.93■□□□□ 0.94
TNFAIP2-206ENST00000560428 TLR3O15455 904 aaKnown RBP20.92■□□□□ 0.94
TNFAIP2-206ENST00000560428 CPT1AP50416 773 aa20.92■□□□□ 0.94
TNFAIP2-206ENST00000560428 PPP2R5BQ15173 497 aa20.92■□□□□ 0.94
TNFAIP2-206ENST00000560428 CHST3Q7LGC8 479 aa20.92■□□□□ 0.94
TNFAIP2-206ENST00000560428 CATIPQ7Z7H3 387 aa20.92■□□□□ 0.94
TNFAIP2-206ENST00000560428 FAM126BQ8IXS8 530 aa20.92■□□□□ 0.94
TNFAIP2-206ENST00000560428 TBC1D5Q92609 795 aa20.92■□□□□ 0.94
TNFAIP2-206ENST00000560428 IWS1Q96ST2 819 aa20.92■□□□□ 0.94
TNFAIP2-206ENST00000560428 RIOX1Q9H6W3 641 aa20.92■□□□□ 0.94
TNFAIP2-206ENST00000560428 SENP2Q9HC62 589 aa20.92■□□□□ 0.94
TNFAIP2-206ENST00000560428 MAP3K20Q9NYL2 800 aaKnown RBP20.92■□□□□ 0.94
TNFAIP2-206ENST00000560428 PTGS1P23219 599 aa20.91■□□□□ 0.94
TNFAIP2-206ENST00000560428 HSD17B4P51659 736 aa20.91■□□□□ 0.94
TNFAIP2-206ENST00000560428 SAMD3Q8N6K7 520 aa20.91■□□□□ 0.94
TNFAIP2-206ENST00000560428 MAP3K14Q99558 947 aa20.91■□□□□ 0.94
TNFAIP2-206ENST00000560428 POLR3EQ9NVU0 708 aa20.91■□□□□ 0.94
TNFAIP2-206ENST00000560428 COL20A1Q9P218 1284 aa20.91■□□□□ 0.94
TNFAIP2-206ENST00000560428 OPLAHO14841 1288 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 SLC27A2O14975 620 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 PPP1R11O60927 126 aaPredicted RBP20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 TIMP1P01033 207 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 MCM5P33992 734 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 FPGSQ05932 587 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 ITGA7Q13683 1181 aa20.9■□□□□ 0.94
TNFAIP2-206ENST00000560428 TTLL4Q14679 1199 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms