RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 MYSM1Q5VVJ2 828 aa18.95■□□□□ 0.62
TPM1-219ENST00000559397 SHCBP1Q8NEM2 672 aa18.95■□□□□ 0.62
TPM1-219ENST00000559397 SPATA32Q96LK8 384 aa18.95■□□□□ 0.62
TPM1-219ENST00000559397 USP28Q96RU2 1077 aa18.95■□□□□ 0.62
TPM1-219ENST00000559397 PORCNQ9H237 461 aa18.95■□□□□ 0.62
TPM1-219ENST00000559397 HOMER2Q9NSB8 354 aa18.95■□□□□ 0.62
TPM1-219ENST00000559397 RNF146Q9NTX7 359 aa18.95■□□□□ 0.62
TPM1-219ENST00000559397 ERCC3P19447 782 aa18.94■□□□□ 0.62
TPM1-219ENST00000559397 COPB2P35606 906 aa18.94■□□□□ 0.62
TPM1-219ENST00000559397 CCNA1P78396 465 aa18.94■□□□□ 0.62
TPM1-219ENST00000559397 CAVIN1Q6NZI2 390 aaKnown RBP18.94■□□□□ 0.62
TPM1-219ENST00000559397 FAM177A1Q8N128 213 aaPredicted RBP18.94■□□□□ 0.62
TPM1-219ENST00000559397 CHST13Q8NET6 341 aa18.94■□□□□ 0.62
TPM1-219ENST00000559397 ZMYND12Q9H0C1 365 aa18.94■□□□□ 0.62
TPM1-219ENST00000559397 ESYT2A0FGR8 921 aa18.93■□□□□ 0.62
TPM1-219ENST00000559397 NFIBO00712 420 aa18.93■□□□□ 0.62
TPM1-219ENST00000559397 NPY5RQ15761 445 aa18.93■□□□□ 0.62
TPM1-219ENST00000559397 NCAPG2Q86XI2 1143 aa18.93■□□□□ 0.62
TPM1-219ENST00000559397 CCDC148Q8NFR7 591 aa18.93■□□□□ 0.62
TPM1-219ENST00000559397 CCDC12Q8WUD4 166 aaPredicted RBP18.93■□□□□ 0.62
TPM1-219ENST00000559397 PHF20Q9BVI0 1012 aa18.93■□□□□ 0.62
TPM1-219ENST00000559397 EFCC1Q9HA90 598 aa18.93■□□□□ 0.62
TPM1-219ENST00000559397 WBP1LQ9NX94 342 aa18.93■□□□□ 0.62
TPM1-219ENST00000559397 RTEL1Q9NZ71 1219 aa18.93■□□□□ 0.62
TPM1-219ENST00000559397 KCNJ14Q9UNX9 436 aa18.93■□□□□ 0.62
TPM1-219ENST00000559397 SMCO2A6NFE2 343 aa18.92■□□□□ 0.62
TPM1-219ENST00000559397 XBP1P17861 261 aa18.92■□□□□ 0.62
TPM1-219ENST00000559397 GHRHRQ02643 423 aa18.92■□□□□ 0.62
TPM1-219ENST00000559397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.92■□□□□ 0.62
TPM1-219ENST00000559397 TBC1D5Q92609 795 aa18.92■□□□□ 0.62
TPM1-219ENST00000559397 FOXP1Q9H334 677 aaPredicted RBP18.92■□□□□ 0.62
TPM1-219ENST00000559397 MROH8Q9H579 483 aa18.92■□□□□ 0.62
TPM1-219ENST00000559397 ACAD9Q9H845 621 aa18.92■□□□□ 0.62
TPM1-219ENST00000559397 TMEM63CQ9P1W3 806 aa18.92■□□□□ 0.62
TPM1-219ENST00000559397 RBBP6Q7Z6E9 1792 aaKnown RBP18.92■□□□□ 0.62
TPM1-219ENST00000559397 ADAMTS3O15072 1205 aa18.92■□□□□ 0.62
TPM1-219ENST00000559397 SAFBQ15424 915 aaKnown RBP eCLIP18.92■□□□□ 0.62
TPM1-219ENST00000559397 RIC8AQ9NPQ8 531 aa18.92■□□□□ 0.62
TPM1-219ENST00000559397 POLR3EQ9NVU0 708 aa18.92■□□□□ 0.62
TPM1-219ENST00000559397 FBXO40Q9UH90 709 aa18.92■□□□□ 0.62
TPM1-219ENST00000559397 NASPP49321 788 aaPredicted RBP18.91■□□□□ 0.62
TPM1-219ENST00000559397 NLRP5P59047 1200 aa18.91■□□□□ 0.62
TPM1-219ENST00000559397 DIS3L2Q8IYB7 885 aaKnown RBP18.91■□□□□ 0.62
TPM1-219ENST00000559397 JMYQ8N9B5 988 aa18.91■□□□□ 0.62
TPM1-219ENST00000559397 PGBD1Q96JS3 809 aa18.91■□□□□ 0.62
TPM1-219ENST00000559397 FTOQ9C0B1 505 aaKnown RBP eCLIP18.91■□□□□ 0.62
TPM1-219ENST00000559397 PSTPIP2Q9H939 334 aa18.91■□□□□ 0.62
TPM1-219ENST00000559397 BTBD18B2RXH4 712 aa18.9■□□□□ 0.62
TPM1-219ENST00000559397 MEIS2O14770 477 aa18.9■□□□□ 0.62
TPM1-219ENST00000559397 GNA11P29992 359 aa18.9■□□□□ 0.62
TPM1-219ENST00000559397 MAPK4P31152 587 aa18.9■□□□□ 0.62
TPM1-219ENST00000559397 MCF2L2Q86YR7 1114 aa18.9■□□□□ 0.62
TPM1-219ENST00000559397 NOSTRINQ8IVI9 506 aa18.9■□□□□ 0.62
TPM1-219ENST00000559397 CUL5Q93034 780 aa18.9■□□□□ 0.62
TPM1-219ENST00000559397 MAF1Q9H063 256 aa18.9■□□□□ 0.62
TPM1-219ENST00000559397 C6orf50Q9HD87 102 aa18.9■□□□□ 0.62
TPM1-219ENST00000559397 A1CFQ9NQ94 594 aaKnown RBP18.9■□□□□ 0.62
TPM1-219ENST00000559397 PCDHA4Q9UN74 947 aa18.9■□□□□ 0.62
TPM1-219ENST00000559397 MGAMO43451 1857 aa18.9■□□□□ 0.62
TPM1-219ENST00000559397 M0R2N6 131 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 GPR25O00155 361 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 PIK3CDO00329 1044 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 YEATS4O95619 227 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 CTGFP29279 349 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 CLK2P49760 499 aaKnown RBP18.89■□□□□ 0.61
TPM1-219ENST00000559397 ADCY7P51828 1080 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 MRPL12P52815 198 aaKnown RBP18.89■□□□□ 0.61
TPM1-219ENST00000559397 ZNF445P59923 1031 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 ZSCAN23Q3MJ62 389 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 NOM1Q5C9Z4 860 aaKnown RBP18.89■□□□□ 0.61
TPM1-219ENST00000559397 GALNT17Q6IS24 598 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 SAMD3Q8N6K7 520 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 DAGLBQ8NCG7 672 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 BEGAINQ9BUH8 593 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 PLXNB2O15031 1838 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 ZNFX1Q9P2E3 1918 aaKnown RBP18.89■□□□□ 0.61
TPM1-219ENST00000559397 FSD2A1L4K1 749 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 CFBP00751 764 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 CALML3P27482 149 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 HSD17B4P51659 736 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 RPS6P62753 249 aaKnown RBP18.89■□□□□ 0.61
TPM1-219ENST00000559397 SP3Q02447 781 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 USP17L6PQ6QN14 398 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 GPR142Q7Z601 462 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 TEX2Q8IWB9 1127 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 LINC00301Q8NCQ3 95 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 SYAP1Q96A49 352 aaPredicted RBP18.89■□□□□ 0.61
TPM1-219ENST00000559397 GLT8D2Q9H1C3 349 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 CLIC4Q9Y696 253 aa18.89■□□□□ 0.61
TPM1-219ENST00000559397 ZSWIM8A7E2V4 1837 aa18.88■□□□□ 0.61
TPM1-219ENST00000559397 GCOM1H8Y6P7 765 aaPredicted RBP18.88■□□□□ 0.61
TPM1-219ENST00000559397 POLR2MP0CAP2 368 aa18.88■□□□□ 0.61
TPM1-219ENST00000559397 LACTBP83111 547 aaPredicted RBP18.88■□□□□ 0.61
TPM1-219ENST00000559397 CEBPZQ03701 1054 aaKnown RBP18.88■□□□□ 0.61
TPM1-219ENST00000559397 GNL2Q13823 731 aaKnown RBP18.88■□□□□ 0.61
TPM1-219ENST00000559397 BAATQ14032 418 aaPredicted RBP18.88■□□□□ 0.61
TPM1-219ENST00000559397 UBE2SQ16763 222 aa18.88■□□□□ 0.61
TPM1-219ENST00000559397 WDR78Q5VTH9 848 aa18.88■□□□□ 0.61
TPM1-219ENST00000559397 ANO1Q5XXA6 986 aa18.88■□□□□ 0.61
TPM1-219ENST00000559397 NSMFQ6X4W1 530 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms