RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 PCGF5Q86SE9 256 aa4.7□□□□□ -1.66
ZEB1-212ENST00000558655 GMCL1P1Q8NEA9 526 aa4.7□□□□□ -1.66
ZEB1-212ENST00000558655 SHISA4Q96DD7 197 aa4.7□□□□□ -1.66
ZEB1-212ENST00000558655 TRIM44Q96DX7 344 aaPredicted RBP4.7□□□□□ -1.66
ZEB1-212ENST00000558655 DYNLL2Q96FJ2 89 aa4.7□□□□□ -1.66
ZEB1-212ENST00000558655 ZNF274Q96GC6 653 aaPredicted RBP4.7□□□□□ -1.66
ZEB1-212ENST00000558655 C12orf42Q96LP6 360 aa4.7□□□□□ -1.66
ZEB1-212ENST00000558655 EPAS1Q99814 870 aa4.7□□□□□ -1.66
ZEB1-212ENST00000558655 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.7□□□□□ -1.66
ZEB1-212ENST00000558655 LY9Q9HBG7 655 aa4.7□□□□□ -1.66
ZEB1-212ENST00000558655 IL17RBQ9NRM6 502 aa4.7□□□□□ -1.66
ZEB1-212ENST00000558655 ZSWIM5Q9P217 1185 aa4.7□□□□□ -1.66
ZEB1-212ENST00000558655 FEZ2Q9UHY8 353 aaPredicted RBP4.7□□□□□ -1.66
ZEB1-212ENST00000558655 ZNF236Q9UL36 1845 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 ADM5C9JUS6 153 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 PLA2G6O60733 806 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 DDAH1O94760 285 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 SNHG28P0DPA3 235 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 TGFB3P10600 412 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 AKR1B1P15121 316 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 CASTP20810 708 aaKnown RBP4.69□□□□□ -1.66
ZEB1-212ENST00000558655 SCNN1AP37088 669 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 TCP10Q12799 353 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 DSG2Q14126 1118 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 LONRF1Q17RB8 773 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 CERKLQ49MI3 558 aaPredicted RBP4.69□□□□□ -1.66
ZEB1-212ENST00000558655 CDAN1Q8IWY9 1227 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 SCYL3Q8IZE3 742 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 ZNF444Q8N0Y2 327 aaPredicted RBP4.69□□□□□ -1.66
ZEB1-212ENST00000558655 CHMP4CQ96CF2 233 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 ZSCAN31Q96LW9 406 aaPredicted RBP4.69□□□□□ -1.66
ZEB1-212ENST00000558655 ZSCAN10Q96SZ4 725 aaPredicted RBP4.69□□□□□ -1.66
ZEB1-212ENST00000558655 KANSL2Q9H9L4 492 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 MTMR4Q9NYA4 1195 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 ZBTB21Q9ULJ3 1066 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 ANGEL1Q9UNK9 670 aaKnown RBP4.69□□□□□ -1.66
ZEB1-212ENST00000558655 PALM3A6NDB9 673 aaPredicted RBP4.69□□□□□ -1.66
ZEB1-212ENST00000558655 B4E1Z4 1266 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 ASNSP08243 561 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 CALM1P0DP23 149 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 CALM2P0DP24 149 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 CALM3P0DP25 149 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 TOP1P11387 765 aaKnown RBP4.69□□□□□ -1.66
ZEB1-212ENST00000558655 NF2P35240 595 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 DDIT3P35638 169 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 RIPPLY3P57055 190 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 MAP3K9P80192 1104 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 TFAP4Q01664 338 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 CUL4AQ13619 759 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 SART3Q15020 963 aaKnown RBP4.69□□□□□ -1.66
ZEB1-212ENST00000558655 ABCB5Q2M3G0 1257 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 C1QTNF12Q5T7M4 302 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 ZNF746Q6NUN9 644 aaPredicted RBP4.69□□□□□ -1.66
ZEB1-212ENST00000558655 USP48Q86UV5 1035 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 SIAH1Q8IUQ4 282 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 ENAHQ8N8S7 591 aaPredicted RBP4.69□□□□□ -1.66
ZEB1-212ENST00000558655 SLC44A5Q8NCS7 719 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 CDX2Q99626 313 aaPredicted RBP4.69□□□□□ -1.66
ZEB1-212ENST00000558655 MKNK2Q9HBH9 465 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 SH2B1Q9NRF2 756 aaPredicted RBP4.69□□□□□ -1.66
ZEB1-212ENST00000558655 PDRG1Q9NUG6 133 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 SNCAIPQ9Y6H5 919 aa4.69□□□□□ -1.66
ZEB1-212ENST00000558655 MGAMO43451 1857 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 TNKSO95271 1327 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 PFKFB2O60825 505 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 ATP2B1P20020 1258 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 IREB2P48200 963 aaKnown RBP4.68□□□□□ -1.66
ZEB1-212ENST00000558655 JAG1P78504 1218 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 CBLBQ13191 982 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 COL9A3Q14050 684 aaPredicted RBP4.68□□□□□ -1.66
ZEB1-212ENST00000558655 GRM4Q14833 912 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 CC2D1AQ6P1N0 951 aaPredicted RBP4.68□□□□□ -1.66
ZEB1-212ENST00000558655 IQCA1Q86XH1 822 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 CRACR2BQ8N4Y2 399 aaPredicted RBP4.68□□□□□ -1.66
ZEB1-212ENST00000558655 C2orf69Q8N8R5 385 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 RSPH1Q8WYR4 309 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 GMCL1Q96IK5 515 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 MFSD14AQ96MC6 490 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 GLIS2Q9BZE0 524 aaPredicted RBP4.68□□□□□ -1.66
ZEB1-212ENST00000558655 KIAA1683Q9H0B3 1180 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 KCNH4Q9UQ05 1017 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 TMX2Q9Y320 296 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 COL4A3Q01955 1670 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 DYTNA2CJ06 578 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 SOWAHDA6NJG2 315 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 TRPA1O75762 1119 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 TTLL1O95922 423 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 TSPY3P0CV98 308 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 TSPY8P0CW00 308 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 VDRP11473 427 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 ALADP13716 330 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 RRM1P23921 792 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 NEK4P51957 841 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 AK2P54819 239 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 AMPD3Q01432 767 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 PPIL2Q13356 520 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 RAB3GAP1Q15042 981 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 ODR4Q5SWX8 454 aa4.68□□□□□ -1.66
ZEB1-212ENST00000558655 RNF187Q5TA31 235 aaPredicted RBP4.68□□□□□ -1.66
ZEB1-212ENST00000558655 KANK3Q6NY19 840 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms