RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 MAMDC4Q6UXC1 1216 aa18.35■□□□□ 0.53
RABGGTA-206ENST00000558649 MCF2L2Q86YR7 1114 aa18.35■□□□□ 0.53
RABGGTA-206ENST00000558649 MSL3Q8N5Y2 521 aaKnown RBP18.35■□□□□ 0.53
RABGGTA-206ENST00000558649 DDX20Q9UHI6 824 aaKnown RBP18.35■□□□□ 0.53
RABGGTA-206ENST00000558649 KIAA0100Q14667 2235 aaKnown RBP18.34■□□□□ 0.53
RABGGTA-206ENST00000558649 CNTNAP5Q8WYK1 1306 aa18.34■□□□□ 0.53
RABGGTA-206ENST00000558649 ASB14A6NK59 587 aa18.34■□□□□ 0.53
RABGGTA-206ENST00000558649 MYCNP04198 464 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-206ENST00000558649 CDC27P30260 824 aa18.34■□□□□ 0.53
RABGGTA-206ENST00000558649 RGS19P49795 217 aa18.34■□□□□ 0.53
RABGGTA-206ENST00000558649 ALDH5A1P51649 535 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-206ENST00000558649 MLLT1Q03111 559 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-206ENST00000558649 AGXT2Q9BYV1 514 aa18.34■□□□□ 0.53
RABGGTA-206ENST00000558649 ADD3Q9UEY8 706 aaKnown RBP18.34■□□□□ 0.53
RABGGTA-206ENST00000558649 OPLAHO14841 1288 aa18.33■□□□□ 0.52
RABGGTA-206ENST00000558649 SEPT4O43236 478 aa18.33■□□□□ 0.52
RABGGTA-206ENST00000558649 FARP2O94887 1054 aaPredicted RBP18.33■□□□□ 0.52
RABGGTA-206ENST00000558649 ZNF865P0CJ78 1059 aaPredicted RBP18.33■□□□□ 0.52
RABGGTA-206ENST00000558649 SMARCA1P28370 1054 aa18.33■□□□□ 0.52
RABGGTA-206ENST00000558649 TRAF1Q13077 416 aa18.33■□□□□ 0.52
RABGGTA-206ENST00000558649 LHX8Q68G74 356 aa18.33■□□□□ 0.52
RABGGTA-206ENST00000558649 EEPD1Q7L9B9 569 aa18.33■□□□□ 0.52
RABGGTA-206ENST00000558649 FBXL16Q8N461 479 aa18.33■□□□□ 0.52
RABGGTA-206ENST00000558649 LENG1Q96BZ8 264 aaPredicted RBP18.33■□□□□ 0.52
RABGGTA-206ENST00000558649 CRISPLD2Q9H0B8 497 aa18.33■□□□□ 0.52
RABGGTA-206ENST00000558649 MSCO60682 206 aa18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 HOXA13P31271 388 aaPredicted RBP18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 ADD1P35611 737 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 RCAN1P53805 252 aa18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 CCT2P78371 535 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 STK3Q13188 491 aa18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 ACVR2BQ13705 512 aa18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 NOL8Q76FK4 1167 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 HEATR3Q7Z4Q2 680 aa18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 FBXO16Q8IX29 292 aaPredicted RBP18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 RGS22Q8NE09 1264 aa18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 SYTL5Q8TDW5 730 aaPredicted RBP18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 DIS3LQ8TF46 1054 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 GPKOWQ92917 476 aaPredicted RBP eCLIP18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 ABHD16BQ9H3Z7 469 aa18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 FAM217BQ9NTX9 383 aaPredicted RBP18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 COL20A1Q9P218 1284 aa18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 NRBP1Q9UHY1 535 aa18.32■□□□□ 0.52
RABGGTA-206ENST00000558649 CCDC196A0A1B0GTZ2 297 aa18.31■□□□□ 0.52
RABGGTA-206ENST00000558649 PPFIA3O75145 1194 aa18.31■□□□□ 0.52
RABGGTA-206ENST00000558649 AKR1A1P14550 325 aa18.31■□□□□ 0.52
RABGGTA-206ENST00000558649 PDIA3P30101 505 aaKnown RBP18.31■□□□□ 0.52
RABGGTA-206ENST00000558649 PDE4DQ08499 809 aa18.31■□□□□ 0.52
RABGGTA-206ENST00000558649 TAAR1Q96RJ0 339 aa18.31■□□□□ 0.52
RABGGTA-206ENST00000558649 MPHOSPH6Q99547 160 aaKnown RBP18.31■□□□□ 0.52
RABGGTA-206ENST00000558649 NCOA5Q9HCD5 579 aaKnown RBP18.31■□□□□ 0.52
RABGGTA-206ENST00000558649 OGDHLQ9ULD0 1010 aa18.31■□□□□ 0.52
RABGGTA-206ENST00000558649 RARBP10826 455 aa18.3■□□□□ 0.52
RABGGTA-206ENST00000558649 HSD17B4P51659 736 aa18.3■□□□□ 0.52
RABGGTA-206ENST00000558649 CCDC144BQ3MJ40 725 aa18.3■□□□□ 0.52
RABGGTA-206ENST00000558649 DNERQ8NFT8 737 aa18.3■□□□□ 0.52
RABGGTA-206ENST00000558649 RMDN3Q96TC7 470 aa18.3■□□□□ 0.52
RABGGTA-206ENST00000558649 FAM184BQ9ULE4 1060 aa18.3■□□□□ 0.52
RABGGTA-206ENST00000558649 V9GY48 417 aaPredicted RBP18.3■□□□□ 0.52
RABGGTA-206ENST00000558649 NID2Q14112 1375 aa18.3■□□□□ 0.52
RABGGTA-206ENST00000558649 GCOM1H8Y6P7 765 aaPredicted RBP18.29■□□□□ 0.52
RABGGTA-206ENST00000558649 POLR2MP0CAP2 368 aa18.29■□□□□ 0.52
RABGGTA-206ENST00000558649 EIF2AK2P19525 551 aaKnown RBP18.29■□□□□ 0.52
RABGGTA-206ENST00000558649 FUT2Q10981 343 aa18.29■□□□□ 0.52
RABGGTA-206ENST00000558649 ARHGEF16Q5VV41 709 aa18.29■□□□□ 0.52
RABGGTA-206ENST00000558649 FCHSD1Q86WN1 690 aa18.29■□□□□ 0.52
RABGGTA-206ENST00000558649 PAWRQ96IZ0 340 aaKnown RBP18.29■□□□□ 0.52
RABGGTA-206ENST00000558649 KATNBL1Q9H079 304 aa18.29■□□□□ 0.52
RABGGTA-206ENST00000558649 XPNPEP3Q9NQH7 507 aa18.29■□□□□ 0.52
RABGGTA-206ENST00000558649 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 ADCY6O43306 1168 aa18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 ADCYAP1R1P41586 468 aa18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 NEK4P51957 841 aa18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 AK2P54819 239 aa18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 PPP2R5BQ15173 497 aa18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 GJC2Q5T442 439 aaPredicted RBP18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 WWC2Q6AWC2 1192 aa18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 ANKLE1Q8NAG6 615 aa18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 NSUN6Q8TEA1 469 aaKnown RBP18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 CUL5Q93034 780 aa18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 PHKBQ93100 1093 aa18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 C22orf23Q9BZE7 217 aa18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 PDGFCQ9NRA1 345 aa18.28■□□□□ 0.52
RABGGTA-206ENST00000558649 B4DLN1 442 aa18.27■□□□□ 0.52
RABGGTA-206ENST00000558649 PGK1P00558 417 aa18.27■□□□□ 0.52
RABGGTA-206ENST00000558649 MRPL12P52815 198 aaKnown RBP18.27■□□□□ 0.52
RABGGTA-206ENST00000558649 NAPAP54920 295 aa18.27■□□□□ 0.52
RABGGTA-206ENST00000558649 EVCP57679 992 aa18.27■□□□□ 0.52
RABGGTA-206ENST00000558649 SMARCC2Q8TAQ2 1214 aa18.27■□□□□ 0.52
RABGGTA-206ENST00000558649 MORC4Q8TE76 937 aa18.27■□□□□ 0.52
RABGGTA-206ENST00000558649 ZNF274Q96GC6 653 aaPredicted RBP18.27■□□□□ 0.52
RABGGTA-206ENST00000558649 MAF1Q9H063 256 aa18.27■□□□□ 0.52
RABGGTA-206ENST00000558649 UPF2Q9HAU5 1272 aaKnown RBP18.27■□□□□ 0.52
RABGGTA-206ENST00000558649 VTA1Q9NP79 307 aa18.27■□□□□ 0.52
RABGGTA-206ENST00000558649 PXMP2Q9NR77 195 aa18.27■□□□□ 0.52
RABGGTA-206ENST00000558649 SYNRGQ9UMZ2 1314 aa18.26■□□□□ 0.51
RABGGTA-206ENST00000558649 KBTBD13C9JR72 458 aa18.26■□□□□ 0.51
RABGGTA-206ENST00000558649 CPLX1O14810 134 aa18.26■□□□□ 0.51
RABGGTA-206ENST00000558649 CAPN2P17655 700 aa18.26■□□□□ 0.51
RABGGTA-206ENST00000558649 MNX1P50219 401 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms