RNA–Protein interactions for RNA: ENST00000555394.5

NUMB-216, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-216ENST00000555394 NUDT12Q9BQG2 462 aa16.28■□□□□ 0.2
NUMB-216ENST00000555394 ATF5Q9Y2D1 282 aaPredicted RBP16.28■□□□□ 0.2
NUMB-216ENST00000555394 GMCL1P1Q8NEA9 526 aa16.27■□□□□ 0.2
NUMB-216ENST00000555394 TSC1Q92574 1164 aa16.27■□□□□ 0.2
NUMB-216ENST00000555394 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.27■□□□□ 0.2
NUMB-216ENST00000555394 HDAC9Q9UKV0 1011 aa16.27■□□□□ 0.2
NUMB-216ENST00000555394 SCAF8Q9UPN6 1271 aaKnown RBP16.27■□□□□ 0.2
NUMB-216ENST00000555394 TRIM49BA6NDI0 452 aa16.27■□□□□ 0.2
NUMB-216ENST00000555394 PMS1P54277 932 aaKnown RBP16.27■□□□□ 0.2
NUMB-216ENST00000555394 ADKP55263 362 aaKnown RBP16.27■□□□□ 0.2
NUMB-216ENST00000555394 PPP4R3AQ6IN85 833 aa16.27■□□□□ 0.2
NUMB-216ENST00000555394 HAS1Q92839 578 aa16.27■□□□□ 0.2
NUMB-216ENST00000555394 P2RX7Q99572 595 aaKnown RBP16.27■□□□□ 0.2
NUMB-216ENST00000555394 TRIM9Q9C026 710 aa16.27■□□□□ 0.2
NUMB-216ENST00000555394 TMEM39BQ9GZU3 492 aa16.27■□□□□ 0.2
NUMB-216ENST00000555394 TMX1Q9H3N1 280 aa16.27■□□□□ 0.2
NUMB-216ENST00000555394 ADD3Q9UEY8 706 aaKnown RBP16.27■□□□□ 0.2
NUMB-216ENST00000555394 DDX25Q9UHL0 483 aaKnown RBP16.27■□□□□ 0.2
NUMB-216ENST00000555394 FXR2P51116 673 aaKnown RBP eCLIP16.27■□□□□ 0.19
NUMB-216ENST00000555394 GRB10Q13322 594 aa16.27■□□□□ 0.19
NUMB-216ENST00000555394 KIAA1755Q5JYT7 1200 aa16.27■□□□□ 0.19
NUMB-216ENST00000555394 MIGA2Q7L4E1 593 aa16.27■□□□□ 0.19
NUMB-216ENST00000555394 CREBRFQ8IUR6 639 aa16.27■□□□□ 0.19
NUMB-216ENST00000555394 ADSSL1Q8N142 457 aa16.27■□□□□ 0.19
NUMB-216ENST00000555394 ACER1Q8TDN7 264 aa16.27■□□□□ 0.19
NUMB-216ENST00000555394 FAM151AQ8WW52 585 aa16.27■□□□□ 0.19
NUMB-216ENST00000555394 GMCL1Q96IK5 515 aa16.27■□□□□ 0.19
NUMB-216ENST00000555394 ZNRF3Q9ULT6 936 aa16.27■□□□□ 0.19
NUMB-216ENST00000555394 MYH4Q9Y623 1939 aa16.26■□□□□ 0.19
NUMB-216ENST00000555394 CNTNAP1P78357 1384 aa16.26■□□□□ 0.19
NUMB-216ENST00000555394 RIOK3O14730 519 aaKnown RBP16.26■□□□□ 0.19
NUMB-216ENST00000555394 BMP3P12645 472 aa16.26■□□□□ 0.19
NUMB-216ENST00000555394 KCNB1Q14721 858 aa16.26■□□□□ 0.19
NUMB-216ENST00000555394 USH1GQ495M9 461 aa16.26■□□□□ 0.19
NUMB-216ENST00000555394 NYAP1Q6ZVC0 841 aa16.26■□□□□ 0.19
NUMB-216ENST00000555394 PNMA5Q96PV4 448 aa16.26■□□□□ 0.19
NUMB-216ENST00000555394 CUEDC2Q9H467 287 aa16.26■□□□□ 0.19
NUMB-216ENST00000555394 HERC5Q9UII4 1024 aaKnown RBP16.26■□□□□ 0.19
NUMB-216ENST00000555394 RHOBTB3O94955 611 aa16.26■□□□□ 0.19
NUMB-216ENST00000555394 CCT6AP40227 531 aaKnown RBP16.26■□□□□ 0.19
NUMB-216ENST00000555394 CXCL9Q07325 125 aa16.26■□□□□ 0.19
NUMB-216ENST00000555394 SLC16A10Q8TF71 515 aa16.26■□□□□ 0.19
NUMB-216ENST00000555394 ZNF592Q92610 1267 aa16.26■□□□□ 0.19
NUMB-216ENST00000555394 CALML4Q96GE6 196 aa16.26■□□□□ 0.19
NUMB-216ENST00000555394 SHTN1A0MZ66 631 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 MEIS2O14770 477 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 MYL1P05976 194 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 PTPN14Q15678 1187 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 SPDYE2Q495Y8 402 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 NIM1KQ8IY84 436 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 TC2NQ8N9U0 490 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 BLOC1S4Q9NUP1 217 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 TMEM266Q2M3C6 531 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 SYDE2Q5VT97 1194 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 TMEM139Q8IV31 216 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 GIMAP8Q8ND71 665 aaPredicted RBP16.25■□□□□ 0.19
NUMB-216ENST00000555394 HPS3Q969F9 1004 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 AMNQ9BXJ7 453 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 KCND1Q9NSA2 647 aa16.25■□□□□ 0.19
NUMB-216ENST00000555394 MCM6Q14566 821 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 KRT31Q15323 416 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 CEP135Q66GS9 1140 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 C7orf25Q9BPX7 421 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 FCER1AP12319 257 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 ASIC1P78348 528 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 STK4Q13043 487 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 PDIA5Q14554 519 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 ECM1Q16610 540 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 NBPF9Q3BBW0 867 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 SNX29Q8TEQ0 813 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 PPP1R13BQ96KQ4 1090 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 ANO3Q9BYT9 981 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 MAGEF1Q9HAY2 307 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 PIM2Q9P1W9 311 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 NRDCO43847 1150 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 PDE4DQ08499 809 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 KCNK18Q7Z418 384 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 FBXO11Q86XK2 927 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 EEF2KMTQ96G04 330 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 VPS16Q9H269 839 aa16.24■□□□□ 0.19
NUMB-216ENST00000555394 MARCH6O60337 910 aa16.23■□□□□ 0.19
NUMB-216ENST00000555394 PBX1P40424 430 aa16.23■□□□□ 0.19
NUMB-216ENST00000555394 IRF2BP1Q8IU81 584 aa16.23■□□□□ 0.19
NUMB-216ENST00000555394 CPLX3Q8WVH0 158 aa16.23■□□□□ 0.19
NUMB-216ENST00000555394 CTAGE1Q96RT6 745 aa16.23■□□□□ 0.19
NUMB-216ENST00000555394 TAB2Q9NYJ8 693 aa16.23■□□□□ 0.19
NUMB-216ENST00000555394 PPP1R1BQ9UD71 204 aaPredicted RBP16.23■□□□□ 0.19
NUMB-216ENST00000555394 MYMKA6NI61 221 aa16.23■□□□□ 0.19
NUMB-216ENST00000555394 LRRC10BA6NIK2 292 aa16.23■□□□□ 0.19
NUMB-216ENST00000555394 RBM10P98175 930 aaKnown RBP16.23■□□□□ 0.19
NUMB-216ENST00000555394 TCP11X2Q5H9J9 407 aa16.23■□□□□ 0.19
NUMB-216ENST00000555394 CCDC112Q8NEF3 446 aa16.23■□□□□ 0.19
NUMB-216ENST00000555394 CDK5RAP3Q96JB5 506 aa16.23■□□□□ 0.19
NUMB-216ENST00000555394 LIMA1Q9UHB6 759 aaKnown RBP16.23■□□□□ 0.19
NUMB-216ENST00000555394 PRR12Q9ULL5 1215 aa16.23■□□□□ 0.19
NUMB-216ENST00000555394 PCDHA12Q9UN75 941 aa16.23■□□□□ 0.19
NUMB-216ENST00000555394 COL2A1P02458 1487 aaPredicted RBP16.22■□□□□ 0.19
NUMB-216ENST00000555394 KCNJ18B7U540 433 aa16.22■□□□□ 0.19
NUMB-216ENST00000555394 KCNJ12Q14500 433 aa16.22■□□□□ 0.19
NUMB-216ENST00000555394 KRT79Q5XKE5 535 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms