RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 CIITAP33076 1130 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 GRB14Q14449 540 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 MYSM1Q5VVJ2 828 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 FAM173BQ6P4H8 233 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 B3GNT9Q6UX72 402 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 PIBF1Q8WXW3 757 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 OSBPP22059 807 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 ADCY7P51828 1080 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 NUCB2P80303 420 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 ZNF792Q3KQV3 632 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 USH1GQ495M9 461 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 SNRNP48Q6IEG0 339 aaKnown RBP7.76□□□□□ -1.17
LINC00517-202ENST00000554257 CPLX2Q6PUV4 134 aaKnown RBP7.76□□□□□ -1.17
LINC00517-202ENST00000554257 USP17L6PQ6QN14 398 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 BRAPQ7Z569 592 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 REM2Q8IYK8 340 aaPredicted RBP7.76□□□□□ -1.17
LINC00517-202ENST00000554257 CCDC148Q8NFR7 591 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 IL31RAQ8NI17 732 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 TRERF1Q96PN7 1200 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 ZSCAN16Q9H4T2 348 aaPredicted RBP7.76□□□□□ -1.17
LINC00517-202ENST00000554257 GJD2Q9UKL4 321 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 CCPG1Q9ULG6 757 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 SOWAHBA6NEL2 793 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 MAP2K2P36507 400 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 GCLCP48506 637 aaPredicted RBP7.76□□□□□ -1.17
LINC00517-202ENST00000554257 NAPAP54920 295 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 C1QTNF8P60827 252 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 MRPS9P82933 396 aaKnown RBP7.76□□□□□ -1.17
LINC00517-202ENST00000554257 SEMA3FQ13275 785 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 CHST13Q8NET6 341 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 MTMR9Q96QG7 549 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 POLR3EQ9NVU0 708 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 SEC63Q9UGP8 760 aaKnown RBP7.76□□□□□ -1.17
LINC00517-202ENST00000554257 CLIC4Q9Y696 253 aa7.76□□□□□ -1.17
LINC00517-202ENST00000554257 MYH11P35749 1972 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 CA12O43570 354 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 HSPA6P17066 643 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 FOSBP53539 338 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 SREBF2Q12772 1141 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 NOGQ13253 232 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 AP3B2Q13367 1082 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 NBR1Q14596 966 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 MAMDC4Q6UXC1 1216 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 ABRAQ8N0Z2 381 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 CUL5Q93034 780 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 PARK7Q99497 189 aaKnown RBP7.75□□□□□ -1.17
LINC00517-202ENST00000554257 SAGE1Q9NXZ1 904 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 RTEL1Q9NZ71 1219 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 PNMA3Q9UL41 463 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 ABT1Q9ULW3 272 aaKnown RBP7.75□□□□□ -1.17
LINC00517-202ENST00000554257 PCDHB6Q9Y5E3 794 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 ALPK3Q96L96 1907 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 POTEFA5A3E0 1075 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 ZBED4O75132 1171 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 BAG4O95429 457 aaKnown RBP7.75□□□□□ -1.17
LINC00517-202ENST00000554257 CALML3P27482 149 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 STAT3P40763 770 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 SPIRE1Q08AE8 756 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 PABPC4Q13310 644 aaKnown RBP eCLIP7.75□□□□□ -1.17
LINC00517-202ENST00000554257 MOXD1Q6UVY6 613 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 ETNPPLQ8TBG4 499 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 USP28Q96RU2 1077 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 PSTPIP2Q9H939 334 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 RNF146Q9NTX7 359 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 PNMA2Q9UL42 364 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 MRPL11Q9Y3B7 192 aaKnown RBP7.75□□□□□ -1.17
LINC00517-202ENST00000554257 ELP1O95163 1332 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 FAM237AA0A1B0GTK4 181 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 SLC37A4O43826 429 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 COBLO75128 1261 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 ERCC3P19447 782 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 RPS6P62753 249 aaKnown RBP7.75□□□□□ -1.17
LINC00517-202ENST00000554257 Q4G0T1 1027 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 AXDND1Q5T1B0 1012 aaPredicted RBP7.75□□□□□ -1.17
LINC00517-202ENST00000554257 PPP4R3AQ6IN85 833 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 FAM184AQ8NB25 1140 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 HAS1Q92839 578 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 PGBD1Q96JS3 809 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 KCNMB3Q9NPA1 279 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 PXMP2Q9NR77 195 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 RNF186Q9NXI6 227 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 BIN2Q9UBW5 565 aaPredicted RBP7.75□□□□□ -1.17
LINC00517-202ENST00000554257 RCOR1Q9UKL0 485 aa7.75□□□□□ -1.17
LINC00517-202ENST00000554257 FAM86B1E9PN63 330 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 SLC25A27O95847 323 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 FAM86B2P0C5J1 330 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 HOXA13P31271 388 aaPredicted RBP7.74□□□□□ -1.17
LINC00517-202ENST00000554257 TRAPPC10P48553 1259 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 DNM1Q05193 864 aaKnown RBP7.74□□□□□ -1.17
LINC00517-202ENST00000554257 PGM5Q15124 567 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 ANKRD13CQ8N6S4 541 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 LINC00301Q8NCQ3 95 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 ANO3Q9BYT9 981 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 ACAD9Q9H845 621 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 UBIAD1Q9Y5Z9 338 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 FERMT3Q86UX7 667 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 REXO1Q8N1G1 1221 aaKnown RBP7.74□□□□□ -1.17
LINC00517-202ENST00000554257 LRRC15Q8TF66 581 aa7.74□□□□□ -1.17
LINC00517-202ENST00000554257 CCDC12Q8WUD4 166 aaPredicted RBP7.74□□□□□ -1.17
LINC00517-202ENST00000554257 TAAR1Q96RJ0 339 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms