RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 AGTPBP1Q9UPW5 1226 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 STK24Q9Y6E0 443 aa12.38□□□□□ -0.43
PABPN1-203ENST00000553960 FAM205CA6NFA0 338 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 GCOM1H8Y6P7 765 aaPredicted RBP12.37□□□□□ -0.43
PABPN1-203ENST00000553960 FLOT1O75955 427 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 MYL1P05976 194 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 POLR2MP0CAP2 368 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 LIG1P18858 919 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 FOSBP53539 338 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 HMGCS2P54868 508 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 SNAPC2Q13487 334 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 GSE1Q14687 1217 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 INF2Q27J81 1249 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 CCAR1Q8IX12 1150 aaKnown RBP12.37□□□□□ -0.43
PABPN1-203ENST00000553960 CHST13Q8NET6 341 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 FAM20AQ96MK3 541 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 TEX13BQ9BXU2 312 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 ANO3Q9BYT9 981 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 CUEDC2Q9H467 287 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 DACT1Q9NYF0 836 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.37□□□□□ -0.43
PABPN1-203ENST00000553960 SCAF8Q9UPN6 1271 aaKnown RBP12.37□□□□□ -0.43
PABPN1-203ENST00000553960 MTMR7Q9Y216 660 aa12.37□□□□□ -0.43
PABPN1-203ENST00000553960 SPDYE16A6NNV3 312 aaPredicted RBP12.36□□□□□ -0.43
PABPN1-203ENST00000553960 WNT7AO00755 349 aa12.36□□□□□ -0.43
PABPN1-203ENST00000553960 NEMFO60524 1076 aa12.36□□□□□ -0.43
PABPN1-203ENST00000553960 NR1I2O75469 434 aa12.36□□□□□ -0.43
PABPN1-203ENST00000553960 IKQ13123 557 aaPredicted RBP12.36□□□□□ -0.43
PABPN1-203ENST00000553960 FOXD4L6Q3SYB3 417 aaPredicted RBP12.36□□□□□ -0.43
PABPN1-203ENST00000553960 EAPPQ56P03 285 aaPredicted RBP12.36□□□□□ -0.43
PABPN1-203ENST00000553960 NOM1Q5C9Z4 860 aaKnown RBP12.36□□□□□ -0.43
PABPN1-203ENST00000553960 NT5DC1Q5TFE4 455 aa12.36□□□□□ -0.43
PABPN1-203ENST00000553960 CAVIN1Q6NZI2 390 aaKnown RBP12.36□□□□□ -0.43
PABPN1-203ENST00000553960 LRSAM1Q6UWE0 723 aa12.36□□□□□ -0.43
PABPN1-203ENST00000553960 FOXD4L3Q6VB84 417 aaPredicted RBP12.36□□□□□ -0.43
PABPN1-203ENST00000553960 RIOX2Q8IUF8 465 aa12.36□□□□□ -0.43
PABPN1-203ENST00000553960 SPATA20Q8TB22 786 aa12.36□□□□□ -0.43
PABPN1-203ENST00000553960 KIFC2Q96AC6 838 aa12.36□□□□□ -0.43
PABPN1-203ENST00000553960 FUCA2Q9BTY2 467 aa12.36□□□□□ -0.43
PABPN1-203ENST00000553960 MAGEF1Q9HAY2 307 aa12.36□□□□□ -0.43
PABPN1-203ENST00000553960 RRAGCQ9HB90 399 aa12.36□□□□□ -0.43
PABPN1-203ENST00000553960 GBA2Q9HCG7 927 aaPredicted RBP12.36□□□□□ -0.43
PABPN1-203ENST00000553960 BIN2Q9UBW5 565 aaPredicted RBP12.36□□□□□ -0.43
PABPN1-203ENST00000553960 FBXO40Q9UH90 709 aa12.36□□□□□ -0.43
PABPN1-203ENST00000553960 COL11A1P12107 1806 aaPredicted RBP12.36□□□□□ -0.43
PABPN1-203ENST00000553960 PASKQ96RG2 1323 aa12.36□□□□□ -0.43
PABPN1-203ENST00000553960 SPDYE3A6NKU9 549 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 MAFGO15525 162 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 KINO60870 393 aaKnown RBP12.35□□□□□ -0.43
PABPN1-203ENST00000553960 STAM2O75886 525 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 ZNF202O95125 648 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 OR52Z1P0C646 297 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 PFKFB1P16118 471 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 MUTP22033 750 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 GTF2A2P52657 109 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 ARHGAP4P98171 946 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 CT47A1Q5JQC4 288 aaPredicted RBP12.35□□□□□ -0.43
PABPN1-203ENST00000553960 HYIQ5T013 277 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 DTHD1Q6ZMT9 781 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 CCDC84Q86UT8 332 aaPredicted RBP12.35□□□□□ -0.43
PABPN1-203ENST00000553960 SLFN12Q8IYM2 578 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 C2orf69Q8N8R5 385 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 FSIP1Q8NA03 581 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 SHCBP1Q8NEM2 672 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 RASGRP4Q8TDF6 673 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 PIBF1Q8WXW3 757 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 LENG9Q96B70 501 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 SLC10A4Q96EP9 437 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 CCDC34Q96HJ3 373 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 MS4A4AQ96JQ5 239 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 RAB34Q9BZG1 259 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 TANGO6Q9C0B7 1094 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 NUP62CLQ9H1M0 184 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 GOLPH3LQ9H4A5 285 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 FAM13BQ9NYF5 915 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 KCNH3Q9ULD8 1083 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 CCPG1Q9ULG6 757 aa12.35□□□□□ -0.43
PABPN1-203ENST00000553960 MEIS1O00470 390 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 SLC25A27O95847 323 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 CETPP11597 493 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 MARCKSP29966 332 aaPredicted RBP12.34□□□□□ -0.43
PABPN1-203ENST00000553960 SYKP43405 635 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 NDUFA8P51970 172 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 MDM2Q00987 491 aaPredicted RBP12.34□□□□□ -0.43
PABPN1-203ENST00000553960 CEBPZQ03701 1054 aaKnown RBP12.34□□□□□ -0.43
PABPN1-203ENST00000553960 E2F4Q16254 413 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 JAKMIP3Q5VZ66 844 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 GPAT2Q6NUI2 795 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 CNNM4Q6P4Q7 775 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 USP17L6PQ6QN14 398 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 SH3RF1Q7Z6J0 888 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 ANKRD23Q86SG2 305 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 OPTNQ96CV9 577 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 ATG4CQ96DT6 458 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 P2RX7Q99572 595 aaKnown RBP12.34□□□□□ -0.43
PABPN1-203ENST00000553960 GTPBP4Q9BZE4 634 aaKnown RBP12.34□□□□□ -0.43
PABPN1-203ENST00000553960 TUBE1Q9UJT0 475 aa12.34□□□□□ -0.43
PABPN1-203ENST00000553960 IGLV3-22A0A075B6J6 115 aa12.33□□□□□ -0.44
PABPN1-203ENST00000553960 SLFN14P0C7P3 912 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms