RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 FOSL2P15408 326 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 CSF2RAP15509 400 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 MCCP23508 829 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 TDO2P48775 406 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 PSMC6P62333 389 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 CCDC144BQ3MJ40 725 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 MUM1L1Q5H9M0 696 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 VPS53Q5VIR6 699 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 CCSAPQ6IQ19 270 aaPredicted RBP8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 KCTD1Q719H9 257 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 NOL8Q76FK4 1167 aaKnown RBP8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 RNF180Q86T96 592 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 STARD7Q9NQZ5 370 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 ECHDC1Q9NTX5 307 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 CNPY2Q9Y2B0 182 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 PCDHB15Q9Y5E8 787 aa8.17□□□□□ -1.1
PRPF40B-214ENST00000551320 BDP1A6H8Y1 2624 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 XIRP2A4UGR9 3374 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 DNAJC25-GNG10A0A024R161 153 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 KIAA0355O15063 1070 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 CTAGE5O15320 804 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 ASGR1P07306 291 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 MYH7P12883 1935 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 AKR1A1P14550 325 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 SLC16A2P36021 539 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 RABGGTBP53611 331 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 CCL23P55773 120 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 FPGSQ05932 587 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 IKQ13123 557 aaPredicted RBP8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 ACVR2BQ13705 512 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 MYSM1Q5VVJ2 828 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 SLFN13Q68D06 897 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 TTBK2Q6IQ55 1244 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 CXCL17Q6UXB2 119 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 ARMCX2Q7L311 632 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 AMOTL1Q8IY63 956 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 CCDC144CPQ8IYA2 1237 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 IFNL3Q8IZI9 196 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 ABRAQ8N0Z2 381 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 ANKRD35Q8N283 1001 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 KBTBD3Q8NAB2 608 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 KLHDC9Q8NEP7 349 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 SPIRE2Q8WWL2 714 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 TEX13BQ9BXU2 312 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 PRDM12Q9H4Q4 367 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 SH2D4AQ9H788 454 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 SLC5A4Q9NY91 659 aa8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 CXXC1Q9P0U4 656 aaPredicted RBP8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 CTDP1Q9Y5B0 961 aaPredicted RBP8.16□□□□□ -1.1
PRPF40B-214ENST00000551320 GRIN2DO15399 1336 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 ZBED4O75132 1171 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 ALAS1P13196 640 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 GCGRP47871 477 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 TFAP4Q01664 338 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 ADGRE1Q14246 886 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 GNASQ5JWF2 1037 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 ZNF365Q70YC5 407 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 SPRED2Q7Z698 418 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 FBXO16Q8IX29 292 aaPredicted RBP8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 ZNF444Q8N0Y2 327 aaPredicted RBP8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 PRPF38AQ8NAV1 312 aaKnown RBP8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 ANKK1Q8NFD2 765 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 APPBP2Q92624 585 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 KATNBL1Q9H079 304 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 TRPV6Q9H1D0 765 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 CPVLQ9H3G5 476 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 SLC38A10Q9HBR0 1119 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 POLR3EQ9NVU0 708 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 MTMR4Q9NYA4 1195 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 NYAP2Q9P242 653 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 ARPP21Q9UBL0 812 aaPredicted RBP8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 FAM184BQ9ULE4 1060 aa8.15□□□□□ -1.1
PRPF40B-214ENST00000551320 GREB1LQ9C091 1923 aaPredicted RBP8.15□□□□□ -1.11
PRPF40B-214ENST00000551320 MYH4Q9Y623 1939 aa8.15□□□□□ -1.11
PRPF40B-214ENST00000551320 ZNF536O15090 1300 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 FRMPD2Q68DX3 1309 aaPredicted RBP8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 DCDC2CA8MYV0 355 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 RFXAPO00287 272 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 DYNC1LI2O43237 492 aaPredicted RBP8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 TSPY3P0CV98 308 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 TSPY8P0CW00 308 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 SMPD1P17405 629 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 CDK7P50613 346 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 CHMP4BP1P59074 171 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 SMAD3P84022 425 aaKnown RBP8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 PPARAQ07869 468 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 SKIV2LQ15477 1246 aaKnown RBP8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 SBK1Q52WX2 424 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 TMEM240Q5SV17 173 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 KRT40Q6A162 431 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 NSMFQ6X4W1 530 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 OTOP2Q7RTS6 562 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 MICALL1Q8N3F8 863 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 WNT2BQ93097 391 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 VWCEQ96DN2 955 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 SCLYQ96I15 445 aa8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 PCMTD1Q96MG8 357 aaPredicted RBP8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 NECAB3Q96P71 396 aaPredicted RBP8.14□□□□□ -1.11
PRPF40B-214ENST00000551320 PBX4Q9BYU1 374 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms