RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 RAD50Q92878 1312 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 PLIN4Q96Q06 1357 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 KPNA6O60684 536 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 CYP2C9P11712 490 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 TMEM31Q5JXX7 168 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 RCSD1Q6JBY9 416 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 KCTD1Q719H9 257 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 IFNL3Q8IZI9 196 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 ARNTL2Q8WYA1 636 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 HLA-CQ95604 372 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 CHMP4CQ96CF2 233 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 MTG1Q9BT17 334 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-212ENST00000550880 WDR11Q9BZH6 1224 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 NAPBQ9H115 298 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 EPB41L4AQ9HCS5 686 aaPredicted RBP13.13□□□□□ -0.31
PFDN5-212ENST00000550880 STX8Q9UNK0 236 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 CHD9Q3L8U1 2897 aa13.13□□□□□ -0.31
PFDN5-212ENST00000550880 MYH7P12883 1935 aa13.12□□□□□ -0.31
PFDN5-212ENST00000550880 LOC102724159A0A0B4J2E5 919 aa13.12□□□□□ -0.31
PFDN5-212ENST00000550880 RFXAPO00287 272 aa13.12□□□□□ -0.31
PFDN5-212ENST00000550880 HOXD11P31277 338 aaPredicted RBP13.12□□□□□ -0.31
PFDN5-212ENST00000550880 PURAQ00577 322 aaKnown RBP13.12□□□□□ -0.31
PFDN5-212ENST00000550880 BFSP2Q13515 415 aa13.12□□□□□ -0.31
PFDN5-212ENST00000550880 PWP2Q15269 919 aaKnown RBP13.12□□□□□ -0.31
PFDN5-212ENST00000550880 MUM1L1Q5H9M0 696 aa13.12□□□□□ -0.31
PFDN5-212ENST00000550880 OR6J1Q8NGC5 347 aa13.12□□□□□ -0.31
PFDN5-212ENST00000550880 MORC4Q8TE76 937 aa13.12□□□□□ -0.31
PFDN5-212ENST00000550880 LRFN3Q9BTN0 628 aa13.12□□□□□ -0.31
PFDN5-212ENST00000550880 PRR12Q9ULL5 1215 aa13.12□□□□□ -0.31
PFDN5-212ENST00000550880 NOD1Q9Y239 953 aa13.12□□□□□ -0.31
PFDN5-212ENST00000550880 MYH4Q9Y623 1939 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 TSPY2A6NKD2 308 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 B4DLN1 442 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 PITPNM1O00562 1244 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
PFDN5-212ENST00000550880 SMARCA5O60264 1052 aaPredicted RBP13.11□□□□□ -0.31
PFDN5-212ENST00000550880 ICAM1P05362 532 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 PTGS1P23219 599 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 KCNJ6P48051 423 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 MRPL12P52815 198 aaKnown RBP13.11□□□□□ -0.31
PFDN5-212ENST00000550880 SNAP25P60880 206 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 PTPN11Q06124 597 aaPredicted RBP13.11□□□□□ -0.31
PFDN5-212ENST00000550880 PPARAQ07869 468 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 NFRKBQ6P4R8 1299 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 HERC6Q8IVU3 1022 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 CCDC155Q8N6L0 562 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 EPHX3Q9H6B9 360 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 PNMA2Q9UL42 364 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 DDX49Q9Y6V7 483 aaKnown RBP13.11□□□□□ -0.31
PFDN5-212ENST00000550880 BDP1A6H8Y1 2624 aa13.11□□□□□ -0.31
PFDN5-212ENST00000550880 TCF20Q9UGU0 1960 aaKnown RBP13.11□□□□□ -0.31
PFDN5-212ENST00000550880 GBF1Q92538 1859 aa13.1□□□□□ -0.31
PFDN5-212ENST00000550880 PTPDC1A2A3K4 754 aa13.1□□□□□ -0.31
PFDN5-212ENST00000550880 M0R2C6 588 aa13.1□□□□□ -0.31
PFDN5-212ENST00000550880 TLL1O43897 1013 aa13.1□□□□□ -0.31
PFDN5-212ENST00000550880 BAIAP3O94812 1187 aa13.1□□□□□ -0.31
PFDN5-212ENST00000550880 IQCF3P0C7M6 154 aa13.1□□□□□ -0.31
PFDN5-212ENST00000550880 ALDH5A1P51649 535 aaPredicted RBP13.1□□□□□ -0.31
PFDN5-212ENST00000550880 TAP1Q03518 808 aa13.1□□□□□ -0.31
PFDN5-212ENST00000550880 BAATQ14032 418 aaPredicted RBP13.1□□□□□ -0.31
PFDN5-212ENST00000550880 PPP2R5BQ15173 497 aa13.1□□□□□ -0.31
PFDN5-212ENST00000550880 CCDC96Q2M329 555 aa13.1□□□□□ -0.31
PFDN5-212ENST00000550880 NBPF20Q3BBV1 942 aa13.1□□□□□ -0.31
PFDN5-212ENST00000550880 VWCEQ96DN2 955 aa13.1□□□□□ -0.31
PFDN5-212ENST00000550880 ZBED2Q9BTP6 218 aa13.1□□□□□ -0.31
PFDN5-212ENST00000550880 MTMR7Q9Y216 660 aa13.1□□□□□ -0.31
PFDN5-212ENST00000550880 PDE4DQ08499 809 aa13.09□□□□□ -0.31
PFDN5-212ENST00000550880 TMEM63BQ5T3F8 832 aa13.09□□□□□ -0.31
PFDN5-212ENST00000550880 DCAF4Q8WV16 495 aa13.09□□□□□ -0.31
PFDN5-212ENST00000550880 PURBQ96QR8 312 aaKnown RBP13.09□□□□□ -0.31
PFDN5-212ENST00000550880 RBM47A0AV96 593 aaKnown RBP13.08□□□□□ -0.32
PFDN5-212ENST00000550880 EPOPA6NHQ4 379 aa13.08□□□□□ -0.32
PFDN5-212ENST00000550880 RANBP6O60518 1105 aaKnown RBP13.08□□□□□ -0.32
PFDN5-212ENST00000550880 GPR37L1O60883 481 aa13.08□□□□□ -0.32
PFDN5-212ENST00000550880 CALML3P27482 149 aa13.08□□□□□ -0.32
PFDN5-212ENST00000550880 CHMP4BP1P59074 171 aa13.08□□□□□ -0.32
PFDN5-212ENST00000550880 GRB10Q13322 594 aa13.08□□□□□ -0.32
PFDN5-212ENST00000550880 KRT40Q6A162 431 aa13.08□□□□□ -0.32
PFDN5-212ENST00000550880 SCFD2Q8WU76 684 aa13.08□□□□□ -0.32
PFDN5-212ENST00000550880 RANBP17Q9H2T7 1088 aaKnown RBP13.08□□□□□ -0.32
PFDN5-212ENST00000550880 LMCD1Q9NZU5 365 aa13.08□□□□□ -0.32
PFDN5-212ENST00000550880 XIRP2A4UGR9 3374 aa13.08□□□□□ -0.32
PFDN5-212ENST00000550880 CHD7Q9P2D1 2997 aa13.08□□□□□ -0.32
PFDN5-212ENST00000550880 PARNO95453 639 aaKnown RBP13.07□□□□□ -0.32
PFDN5-212ENST00000550880 SYDE2Q5VT97 1194 aa13.07□□□□□ -0.32
PFDN5-212ENST00000550880 RNF207Q6ZRF8 634 aa13.07□□□□□ -0.32
PFDN5-212ENST00000550880 CAGE1Q8TC20 777 aa13.07□□□□□ -0.32
PFDN5-212ENST00000550880 FSD1Q9BTV5 496 aa13.07□□□□□ -0.32
PFDN5-212ENST00000550880 PRRC2BQ5JSZ5 2229 aaKnown RBP13.07□□□□□ -0.32
PFDN5-212ENST00000550880 A6NJR5 290 aa13.06□□□□□ -0.32
PFDN5-212ENST00000550880 NFIBO00712 420 aa13.06□□□□□ -0.32
PFDN5-212ENST00000550880 TXNP10599 105 aaKnown RBP13.06□□□□□ -0.32
PFDN5-212ENST00000550880 SLC16A2P36021 539 aa13.06□□□□□ -0.32
PFDN5-212ENST00000550880 PTGISQ16647 500 aa13.06□□□□□ -0.32
PFDN5-212ENST00000550880 TSHZ3Q63HK5 1081 aa13.06□□□□□ -0.32
PFDN5-212ENST00000550880 DNERQ8NFT8 737 aa13.06□□□□□ -0.32
PFDN5-212ENST00000550880 AFAP1L1Q8TED9 768 aa13.06□□□□□ -0.32
PFDN5-212ENST00000550880 CRBNQ96SW2 442 aa13.06□□□□□ -0.32
PFDN5-212ENST00000550880 IL17RBQ9NRM6 502 aa13.06□□□□□ -0.32
PFDN5-212ENST00000550880 LRRC37A2A6NM11 1700 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms