RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 FAM177A1Q8N128 213 aaPredicted RBP24.7■■□□□ 1.54
NEK3-202ENST00000550841 APBA2Q99767 749 aa24.7■■□□□ 1.54
NEK3-202ENST00000550841 SH3GLB2Q9NR46 395 aa24.7■■□□□ 1.54
NEK3-202ENST00000550841 ORC3Q9UBD5 711 aaPredicted RBP24.7■■□□□ 1.54
NEK3-202ENST00000550841 DNAJC25-GNG10A0A024R161 153 aa24.69■■□□□ 1.54
NEK3-202ENST00000550841 GCOM1H8Y6P7 765 aaPredicted RBP24.69■■□□□ 1.54
NEK3-202ENST00000550841 POLR2MP0CAP2 368 aa24.69■■□□□ 1.54
NEK3-202ENST00000550841 XBP1P17861 261 aa24.69■■□□□ 1.54
NEK3-202ENST00000550841 NAPAP54920 295 aa24.69■■□□□ 1.54
NEK3-202ENST00000550841 NSUN7Q8NE18 718 aaKnown RBP24.69■■□□□ 1.54
NEK3-202ENST00000550841 GPKOWQ92917 476 aaPredicted RBP eCLIP24.69■■□□□ 1.54
NEK3-202ENST00000550841 CUL5Q93034 780 aa24.69■■□□□ 1.54
NEK3-202ENST00000550841 PSTPIP2Q9H939 334 aa24.69■■□□□ 1.54
NEK3-202ENST00000550841 PLXNB2O15031 1838 aa24.69■■□□□ 1.54
NEK3-202ENST00000550841 STXBP3O00186 592 aa24.68■■□□□ 1.54
NEK3-202ENST00000550841 COBLO75128 1261 aa24.68■■□□□ 1.54
NEK3-202ENST00000550841 PPFIA3O75145 1194 aa24.68■■□□□ 1.54
NEK3-202ENST00000550841 CFBP00751 764 aa24.68■■□□□ 1.54
NEK3-202ENST00000550841 MRPL12P52815 198 aaKnown RBP24.68■■□□□ 1.54
NEK3-202ENST00000550841 HMGN5P82970 282 aaKnown RBP24.68■■□□□ 1.54
NEK3-202ENST00000550841 GHRHRQ02643 423 aa24.68■■□□□ 1.54
NEK3-202ENST00000550841 ZNF792Q3KQV3 632 aa24.68■■□□□ 1.54
NEK3-202ENST00000550841 CCDC148Q8NFR7 591 aa24.68■■□□□ 1.54
NEK3-202ENST00000550841 PXYLP1Q8TE99 480 aa24.68■■□□□ 1.54
NEK3-202ENST00000550841 PGK2P07205 417 aa24.67■■□□□ 1.54
NEK3-202ENST00000550841 CALML3P27482 149 aa24.67■■□□□ 1.54
NEK3-202ENST00000550841 RPS6P62753 249 aaKnown RBP24.67■■□□□ 1.54
NEK3-202ENST00000550841 HSCBQ8IWL3 235 aa24.67■■□□□ 1.54
NEK3-202ENST00000550841 SLAIN1Q8ND83 568 aa24.67■■□□□ 1.54
NEK3-202ENST00000550841 ADD3Q9UEY8 706 aaKnown RBP24.67■■□□□ 1.54
NEK3-202ENST00000550841 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.67■■□□□ 1.54
NEK3-202ENST00000550841 ZSWIM8A7E2V4 1837 aa24.67■■□□□ 1.54
NEK3-202ENST00000550841 ZNF236Q9UL36 1845 aa24.66■■□□□ 1.54
NEK3-202ENST00000550841 SMCO2A6NFE2 343 aa24.66■■□□□ 1.54
NEK3-202ENST00000550841 B4DLN1 442 aa24.66■■□□□ 1.54
NEK3-202ENST00000550841 ADCY3O60266 1144 aa24.66■■□□□ 1.54
NEK3-202ENST00000550841 GNA11P29992 359 aa24.66■■□□□ 1.54
NEK3-202ENST00000550841 HSD17B4P51659 736 aa24.66■■□□□ 1.54
NEK3-202ENST00000550841 ST3GAL1Q11201 340 aa24.66■■□□□ 1.54
NEK3-202ENST00000550841 ZNF467Q7Z7K2 595 aaPredicted RBP24.66■■□□□ 1.54
NEK3-202ENST00000550841 MSL3Q8N5Y2 521 aaKnown RBP24.66■■□□□ 1.54
NEK3-202ENST00000550841 FAM133AQ8N9E0 248 aa24.66■■□□□ 1.54
NEK3-202ENST00000550841 SMARCC2Q8TAQ2 1214 aa24.66■■□□□ 1.54
NEK3-202ENST00000550841 MPHOSPH6Q99547 160 aaKnown RBP24.66■■□□□ 1.54
NEK3-202ENST00000550841 C6orf50Q9HD87 102 aa24.66■■□□□ 1.54
NEK3-202ENST00000550841 PTCH2Q9Y6C5 1203 aa24.66■■□□□ 1.54
NEK3-202ENST00000550841 LOC102724159A0A0B4J2E5 919 aa24.65■■□□□ 1.54
NEK3-202ENST00000550841 ESYT2A0FGR8 921 aa24.65■■□□□ 1.54
NEK3-202ENST00000550841 K7ELQ4 463 aaPredicted RBP24.65■■□□□ 1.54
NEK3-202ENST00000550841 PIK3CDO00329 1044 aa24.65■■□□□ 1.54
NEK3-202ENST00000550841 OPLAHO14841 1288 aa24.65■■□□□ 1.54
NEK3-202ENST00000550841 PWP2Q15269 919 aaKnown RBP24.65■■□□□ 1.54
NEK3-202ENST00000550841 DNERQ8NFT8 737 aa24.65■■□□□ 1.54
NEK3-202ENST00000550841 NPLOC4Q8TAT6 608 aa24.65■■□□□ 1.54
NEK3-202ENST00000550841 TBC1D5Q92609 795 aa24.65■■□□□ 1.54
NEK3-202ENST00000550841 RIC8AQ9NPQ8 531 aa24.65■■□□□ 1.54
NEK3-202ENST00000550841 KIF3AQ9Y496 699 aa24.65■■□□□ 1.54
NEK3-202ENST00000550841 GRK4P32298 578 aa24.64■■□□□ 1.54
NEK3-202ENST00000550841 ADCY7P51828 1080 aa24.64■■□□□ 1.54
NEK3-202ENST00000550841 PRPF38BQ5VTL8 546 aaKnown RBP24.64■■□□□ 1.54
NEK3-202ENST00000550841 OLFML2BQ68BL8 750 aa24.64■■□□□ 1.54
NEK3-202ENST00000550841 FAM184AQ8NB25 1140 aa24.64■■□□□ 1.54
NEK3-202ENST00000550841 BICD2Q8TD16 824 aa24.64■■□□□ 1.54
NEK3-202ENST00000550841 SYTL5Q8TDW5 730 aaPredicted RBP24.64■■□□□ 1.54
NEK3-202ENST00000550841 MAML3Q96JK9 1138 aa24.64■■□□□ 1.54
NEK3-202ENST00000550841 ASB14A6NK59 587 aa24.63■■□□□ 1.53
NEK3-202ENST00000550841 JAK2O60674 1132 aa24.63■■□□□ 1.53
NEK3-202ENST00000550841 FDPSP14324 419 aaKnown RBP24.63■■□□□ 1.53
NEK3-202ENST00000550841 NLRP5P59047 1200 aa24.63■■□□□ 1.53
NEK3-202ENST00000550841 CNTN2Q02246 1040 aa24.63■■□□□ 1.53
NEK3-202ENST00000550841 CUL4AQ13619 759 aa24.63■■□□□ 1.53
NEK3-202ENST00000550841 MFSD14CQ5VZR4 134 aa24.63■■□□□ 1.53
NEK3-202ENST00000550841 MCTP2Q6DN12 878 aa24.63■■□□□ 1.53
NEK3-202ENST00000550841 GALNT17Q6IS24 598 aa24.63■■□□□ 1.53
NEK3-202ENST00000550841 SLC30A10Q6XR72 485 aa24.63■■□□□ 1.53
NEK3-202ENST00000550841 ALG1Q9BT22 464 aa24.63■■□□□ 1.53
NEK3-202ENST00000550841 ZMYND12Q9H0C1 365 aa24.63■■□□□ 1.53
NEK3-202ENST00000550841 VPS54Q9P1Q0 977 aa24.63■■□□□ 1.53
NEK3-202ENST00000550841 TRIM29Q14134 588 aa24.62■■□□□ 1.53
NEK3-202ENST00000550841 TYW1BQ6NUM6 668 aa24.62■■□□□ 1.53
NEK3-202ENST00000550841 NSUN6Q8TEA1 469 aaKnown RBP24.62■■□□□ 1.53
NEK3-202ENST00000550841 SOWAHBA6NEL2 793 aa24.61■■□□□ 1.53
NEK3-202ENST00000550841 MEIS2O14770 477 aa24.61■■□□□ 1.53
NEK3-202ENST00000550841 FOSP01100 380 aaPredicted RBP24.61■■□□□ 1.53
NEK3-202ENST00000550841 HOXA13P31271 388 aaPredicted RBP24.61■■□□□ 1.53
NEK3-202ENST00000550841 SLC9C1Q4G0N8 1177 aa24.61■■□□□ 1.53
NEK3-202ENST00000550841 MAMDC4Q6UXC1 1216 aa24.61■■□□□ 1.53
NEK3-202ENST00000550841 BIN2Q9UBW5 565 aaPredicted RBP24.61■■□□□ 1.53
NEK3-202ENST00000550841 SMC3Q9UQE7 1217 aa24.61■■□□□ 1.53
NEK3-202ENST00000550841 HMGCRP04035 888 aa24.6■■□□□ 1.53
NEK3-202ENST00000550841 CCL14Q16627 93 aa24.6■■□□□ 1.53
NEK3-202ENST00000550841 ARHGEF16Q5VV41 709 aa24.6■■□□□ 1.53
NEK3-202ENST00000550841 USP17L6PQ6QN14 398 aa24.6■■□□□ 1.53
NEK3-202ENST00000550841 FCHSD1Q86WN1 690 aa24.6■■□□□ 1.53
NEK3-202ENST00000550841 INTS4Q96HW7 963 aaKnown RBP24.6■■□□□ 1.53
NEK3-202ENST00000550841 TAAR1Q96RJ0 339 aa24.6■■□□□ 1.53
NEK3-202ENST00000550841 IWS1Q96ST2 819 aa24.6■■□□□ 1.53
NEK3-202ENST00000550841 RMDN3Q96TC7 470 aa24.6■■□□□ 1.53
NEK3-202ENST00000550841 TINF2Q9BSI4 451 aa24.6■■□□□ 1.53
NEK3-202ENST00000550841 EHMT1Q9H9B1 1298 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms