RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 ZNF219Q9P2Y4 722 aaPredicted RBP11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 FRMPD2Q68DX3 1309 aaPredicted RBP11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 SPOPO43791 374 aa11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 CTNNA2P26232 953 aa11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 MTMR3Q13615 1198 aa11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 NAP1L3Q99457 506 aaPredicted RBP11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 LZTS2Q9BRK4 669 aa11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 HPSEQ9Y251 543 aa11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 ATP6V0A2Q9Y487 856 aa11.27□□□□□ -0.61
SMARCC2-209ENST00000550164 H3BQF6 201 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 BUB1BO60566 1050 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 GKAP1Q5VSY0 366 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 NFRKBQ6P4R8 1299 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 GPBP1Q86WP2 473 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 FOXP4Q8IVH2 680 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 CCDC77Q9BR77 488 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 NYXQ9GZU5 481 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 DNAJC5Q9H3Z4 198 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 MTUS1Q9ULD2 1270 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 CHMP2AO43633 222 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 SASH3O75995 380 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 NR1D1P20393 614 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 MGARPQ8TDB4 240 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 LARP4BQ92615 738 aaKnown RBP11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 JPH2Q9BR39 696 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 ISCA1Q9BUE6 129 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 CTTNBP2NLQ9P2B4 639 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 PCDHA12Q9UN75 941 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 NCK2O43639 380 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 ADAM9Q13443 819 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 ALX1Q15699 326 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 BEND6Q5SZJ8 279 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 SEL1L2Q5TEA6 688 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 MEX3CQ5U5Q3 659 aaKnown RBP11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 ARL6IP4Q66PJ3 421 aaKnown RBP11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 CCDC174Q6PII3 467 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 FBF1Q8TES7 1133 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 PANK4Q9NVE7 773 aa11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 ARMCX3Q9UH62 379 aaPredicted RBP11.26□□□□□ -0.61
SMARCC2-209ENST00000550164 GCNT3O95395 438 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 USP17L8P0C7I0 530 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 APBA1Q02410 837 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 ARHGAP44Q17R89 818 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 EMBQ6PCB8 327 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 WDR66Q8TBY9 1149 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 PIGBQ92521 554 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 AGXT2Q9BYV1 514 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 ADAMTS1Q9UHI8 967 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 AMFRQ9UKV5 643 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 RIPOR2Q9Y4F9 1068 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 TFRCP02786 760 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 XRCC5P13010 732 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 CCDC6Q16204 474 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 MUM1L1Q5H9M0 696 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 MMS22LQ6ZRQ5 1243 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 GSTA5Q7RTV2 222 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 SPATS2Q86XZ4 545 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 CCDC50Q8IVM0 306 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 RDH13Q8NBN7 331 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 TBCKQ8TEA7 893 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 DYNLL2Q96FJ2 89 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 CPVLQ9H3G5 476 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 CUEDC2Q9H467 287 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.25□□□□□ -0.612e-6■■■■■ 51.7
SMARCC2-209ENST00000550164 ATP8A2Q9NTI2 1148 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 FRMD4BQ9Y2L6 1034 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 RIMBP2O15034 1052 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 RGS16O15492 202 aaPredicted RBP11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 H2AFZP0C0S5 128 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 PCP11498 1178 aaKnown RBP11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 E2F5Q15329 346 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 ALS2CLQ60I27 953 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 HAUS3Q68CZ6 603 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 DENND2CQ68D51 928 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 H2AFVQ71UI9 128 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 FAM133AQ8N9E0 248 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 TMOD2Q9NZR1 351 aa11.25□□□□□ -0.61
SMARCC2-209ENST00000550164 ANO9A1A5B4 782 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 CYP2D6P10635 497 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 GALNT17Q6IS24 598 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 ADAMTS13Q76LX8 1427 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 AGPAT5Q9NUQ2 364 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 DNM3Q9UQ16 869 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 CLTAP09496 248 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 EEF2P13639 858 aaKnown RBP11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 FKBP3Q00688 224 aaKnown RBP11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 DPYDQ12882 1025 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 CCDC105Q8IYK2 499 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 SYCE1Q8N0S2 351 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 LRRC47Q8N1G4 583 aaKnown RBP11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 MAP3K14Q99558 947 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 LIMA1Q9UHB6 759 aaKnown RBP11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 USP17L3A6NCW0 530 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 USP17L4A6NCW7 530 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 CALUO43852 315 aaPredicted RBP11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 STAT1P42224 750 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 IFNAR2P48551 515 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 LACTBP83111 547 aaPredicted RBP11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 CCDC93Q567U6 631 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms