RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 TMEM47Q9BQJ4 181 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 DNAJC18Q9H819 358 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 JRKLQ9Y4A0 524 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 SIPA1L1O43166 1804 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 NPM3O75607 178 aaKnown RBP16.86■□□□□ 0.29
CHFR-223ENST00000544268 GOLGA8HP0CJ92 632 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 SCG2P13521 617 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 DLGAP5Q15398 846 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 CC2D1AQ6P1N0 951 aaPredicted RBP16.86■□□□□ 0.29
CHFR-223ENST00000544268 WDR24Q96S15 920 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 PLIN2Q99541 437 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 SWAP70Q9UH65 585 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 HOOK1Q9UJC3 728 aaKnown RBP16.86■□□□□ 0.29
CHFR-223ENST00000544268 ADAM21Q9UKJ8 722 aa16.86■□□□□ 0.29
CHFR-223ENST00000544268 CLRN2A0PK11 232 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 FAM196BA6NMK8 535 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 CUL4BQ13620 913 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 SH3RF1Q7Z6J0 888 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 BANK1Q8NDB2 785 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 BAG1Q99933 345 aaPredicted RBP16.85■□□□□ 0.29
CHFR-223ENST00000544268 EHD4Q9H223 541 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 DHX36Q9H2U1 1008 aaKnown RBP16.85■□□□□ 0.29
CHFR-223ENST00000544268 PPP2R2CQ9Y2T4 447 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 LTBP3Q9NS15 1303 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 SHTN1A0MZ66 631 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 SOWAHDA6NJG2 315 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 CCP110O43303 1012 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 NRDCO43847 1150 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 IVLP07476 585 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 MAGEA9P43362 315 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 SPECC1LQ69YQ0 1117 aa16.85■□□□□ 0.29
CHFR-223ENST00000544268 ARFGEF1Q9Y6D6 1849 aa16.84■□□□□ 0.29
CHFR-223ENST00000544268 PPP1R3GB7ZBB8 358 aa16.84■□□□□ 0.29
CHFR-223ENST00000544268 ATP2C1P98194 919 aaPredicted RBP16.84■□□□□ 0.29
CHFR-223ENST00000544268 NR1I3Q14994 352 aa16.84■□□□□ 0.29
CHFR-223ENST00000544268 KARSQ15046 597 aaKnown RBP16.84■□□□□ 0.29
CHFR-223ENST00000544268 PI4KBQ9UBF8 816 aa16.84■□□□□ 0.29
CHFR-223ENST00000544268 CTNND2Q9UQB3 1225 aa16.84■□□□□ 0.29
CHFR-223ENST00000544268 PLIN4Q96Q06 1357 aa16.84■□□□□ 0.29
CHFR-223ENST00000544268 TCP10L2B9ZVM9 353 aa16.84■□□□□ 0.29
CHFR-223ENST00000544268 CCT6AP40227 531 aaKnown RBP16.84■□□□□ 0.29
CHFR-223ENST00000544268 LMAN1P49257 510 aa16.84■□□□□ 0.29
CHFR-223ENST00000544268 TTC31Q49AM3 519 aaPredicted RBP16.84■□□□□ 0.29
CHFR-223ENST00000544268 CLEC10AQ8IUN9 316 aa16.84■□□□□ 0.29
CHFR-223ENST00000544268 ELOA2Q8IYF1 753 aaPredicted RBP16.84■□□□□ 0.29
CHFR-223ENST00000544268 ZNF70Q9UC06 446 aaPredicted RBP16.84■□□□□ 0.29
CHFR-223ENST00000544268 SYNRGQ9UMZ2 1314 aa16.83■□□□□ 0.29
CHFR-223ENST00000544268 CYTH3O43739 400 aa16.83■□□□□ 0.28
CHFR-223ENST00000544268 ENTPD3O75355 529 aa16.83■□□□□ 0.28
CHFR-223ENST00000544268 NOVP48745 357 aa16.83■□□□□ 0.28
CHFR-223ENST00000544268 E2F4Q16254 413 aa16.83■□□□□ 0.28
CHFR-223ENST00000544268 PFKFB3Q16875 520 aaPredicted RBP16.83■□□□□ 0.28
CHFR-223ENST00000544268 URI1O94763 535 aaPredicted RBP16.82■□□□□ 0.28
CHFR-223ENST00000544268 RBL2Q08999 1139 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 TNIP1Q15025 636 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 GPR161Q8N6U8 529 aaKnown RBP16.82■□□□□ 0.28
CHFR-223ENST00000544268 EEF2KMTQ96G04 330 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 FHDC1Q9C0D6 1143 aaPredicted RBP16.82■□□□□ 0.28
CHFR-223ENST00000544268 MRPL44Q9H9J2 332 aaKnown RBP16.82■□□□□ 0.28
CHFR-223ENST00000544268 MTMR4Q9NYA4 1195 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 TMOD2Q9NZR1 351 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 ATRNL1Q5VV63 1379 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 IGKV6D-41A0A0C4DH26 115 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 RNF225M0QZC1 329 aaPredicted RBP16.82■□□□□ 0.28
CHFR-223ENST00000544268 KIF5BP33176 963 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 EIF6P56537 245 aaKnown RBP16.82■□□□□ 0.28
CHFR-223ENST00000544268 GRM4Q14833 912 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 SPDYE2Q495Y8 402 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 LRRC15Q8TF66 581 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 TMEM60Q9H2L4 133 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 ARFGAP3Q9NP61 516 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 MAD2L2Q9UI95 211 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 GDAQ9Y2T3 454 aa16.82■□□□□ 0.28
CHFR-223ENST00000544268 A0A1B0GTH6 734 aa16.81■□□□□ 0.28
CHFR-223ENST00000544268 SHROOM1Q2M3G4 852 aaPredicted RBP16.81■□□□□ 0.28
CHFR-223ENST00000544268 PDXDC2PQ6P474 469 aa16.81■□□□□ 0.28
CHFR-223ENST00000544268 LEKR1Q6ZMV7 388 aa16.81■□□□□ 0.28
CHFR-223ENST00000544268 CEP120Q8N960 986 aa16.81■□□□□ 0.28
CHFR-223ENST00000544268 CARD6Q9BX69 1037 aa16.81■□□□□ 0.28
CHFR-223ENST00000544268 MPHOSPH10O00566 681 aaKnown RBP16.81■□□□□ 0.28
CHFR-223ENST00000544268 ABL1P00519 1130 aa16.81■□□□□ 0.28
CHFR-223ENST00000544268 PACS2Q86VP3 889 aa16.81■□□□□ 0.28
CHFR-223ENST00000544268 MTMR14Q8NCE2 650 aa16.81■□□□□ 0.28
CHFR-223ENST00000544268 FERMT2Q96AC1 680 aa16.81■□□□□ 0.28
CHFR-223ENST00000544268 CCDC34Q96HJ3 373 aa16.81■□□□□ 0.28
CHFR-223ENST00000544268 FUT8Q9BYC5 575 aa16.81■□□□□ 0.28
CHFR-223ENST00000544268 ARHGAP6O43182 974 aa16.8■□□□□ 0.28
CHFR-223ENST00000544268 TFRCP02786 760 aaKnown RBP16.8■□□□□ 0.28
CHFR-223ENST00000544268 NBPF9Q3BBW0 867 aa16.8■□□□□ 0.28
CHFR-223ENST00000544268 CT47A1Q5JQC4 288 aaPredicted RBP16.8■□□□□ 0.28
CHFR-223ENST00000544268 KANK3Q6NY19 840 aa16.8■□□□□ 0.28
CHFR-223ENST00000544268 RAD9BQ6WBX8 426 aa16.8■□□□□ 0.28
CHFR-223ENST00000544268 C4orf32Q8N8J7 132 aa16.8■□□□□ 0.28
CHFR-223ENST00000544268 TRIML1Q8N9V2 468 aa16.8■□□□□ 0.28
CHFR-223ENST00000544268 CSRNP1Q96S65 589 aa16.8■□□□□ 0.28
CHFR-223ENST00000544268 VEZTQ9HBM0 779 aa16.8■□□□□ 0.28
CHFR-223ENST00000544268 MYOZ2Q9NPC6 264 aa16.8■□□□□ 0.28
CHFR-223ENST00000544268 FZD9O00144 591 aa16.8■□□□□ 0.28
CHFR-223ENST00000544268 WNT10BO00744 389 aa16.8■□□□□ 0.28
CHFR-223ENST00000544268 RPS6KA5O75582 802 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms