RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CLEC4DQ8WXI8 215 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 MTA3Q9BTC8 594 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 MFRPQ9BY79 579 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 MAF1Q9H063 256 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 JMJD4Q9H9V9 463 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ANO2Q9NQ90 1003 aa11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ADD3Q9UEY8 706 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-214ENST00000543048 TRIOBPQ9H2D6 2365 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 LOC102724159A0A0B4J2E5 919 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 PTPDC1A2A3K4 754 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 KLRF2D3W0D1 207 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 NFIBO00712 420 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 DHX16O60231 1041 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CDC45O75419 566 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 PGK1P00558 417 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 MCM5P33992 734 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ADCYAP1R1P41586 468 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 PWP2Q15269 919 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CDC37Q16543 378 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CCDC144BQ3MJ40 725 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 USH1GQ495M9 461 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 TMEM67Q5HYA8 995 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 HABP4Q5JVS0 413 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CREB3L3Q68CJ9 461 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 IQSEC1Q6DN90 963 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 SLC39A5Q6ZMH5 540 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 RNF207Q6ZRF8 634 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CATIPQ7Z7H3 387 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 MB21D2Q8IYB1 491 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 TMTC2Q8N394 836 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 STAG2Q8N3U4 1231 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 TSEN34Q9BSV6 310 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 KATNBL1Q9H079 304 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 MAD2L2Q9UI95 211 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 KIAA1217Q5T5P2 1943 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 ABCB11O95342 1321 aa11.34□□□□□ -0.59
TNFRSF1A-214ENST00000543048 CALML3P27482 149 aa11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 ANTXR2P58335 489 aa11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 TNFAIP2Q03169 654 aa11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 GRM4Q14833 912 aa11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 QRICH1Q2TAL8 776 aa11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 RNF20Q5VTR2 975 aa11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 FBXO11Q86XK2 927 aa11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 KLHDC9Q8NEP7 349 aa11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 MORC4Q8TE76 937 aa11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 FERMT2Q96AC1 680 aa11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 PURBQ96QR8 312 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 SPC25Q9HBM1 224 aa11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 SENP2Q9HC62 589 aa11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 PHF24Q9UPV7 400 aa11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 MRPL11Q9Y3B7 192 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-214ENST00000543048 B4DLN1 442 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 PRC1O43663 620 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 ADAMTS4O75173 837 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 ALDH5A1P51649 535 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 MRPL12P52815 198 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 GJA9P57773 515 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 RPS6P62753 249 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 TROAPQ12815 778 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 KCNA10Q16322 511 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 TAPT1Q6NXT6 567 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 NOL8Q76FK4 1167 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 MCF2L2Q86YR7 1114 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 FBXO22Q8NEZ5 403 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 DNERQ8NFT8 737 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 TBC1D5Q92609 795 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 MTMR8Q96EF0 704 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 TMEM87BQ96K49 555 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 MPHOSPH6Q99547 160 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 MAP3K14Q99558 947 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 AMNQ9BXJ7 453 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 RIOX1Q9H6W3 641 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 VTA1Q9NP79 307 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 ZMYND8Q9ULU4 1186 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 ASTN1O14525 1302 aa11.32□□□□□ -0.6
TNFRSF1A-214ENST00000543048 ZBTB5O15062 677 aa11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 C6orf222P0C671 652 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 RTP1P59025 263 aa11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 TRAF1Q13077 416 aa11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 TSGA10IPQ3SY00 556 aa11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 GNASQ5JWF2 1037 aa11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 SLC30A10Q6XR72 485 aa11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 PCSK9Q8NBP7 692 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 LENG1Q96BZ8 264 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 AP5M1Q9H0R1 490 aa11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 UPF3AQ9H1J1 476 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 LY9Q9HBG7 655 aa11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 PDGFCQ9NRA1 345 aa11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 Q9Y3F1 56 aa11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 SYNRGQ9UMZ2 1314 aa11.31□□□□□ -0.6
TNFRSF1A-214ENST00000543048 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF1A-214ENST00000543048 RBM47A0AV96 593 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-214ENST00000543048 MOXD2PA6NHM9 499 aa11.3□□□□□ -0.6
TNFRSF1A-214ENST00000543048 CCDC69A6NI79 296 aa11.3□□□□□ -0.6
TNFRSF1A-214ENST00000543048 ADCY6O43306 1168 aa11.3□□□□□ -0.6
TNFRSF1A-214ENST00000543048 SMPD1P17405 629 aa11.3□□□□□ -0.6
TNFRSF1A-214ENST00000543048 SYN1P17600 705 aa11.3□□□□□ -0.6
TNFRSF1A-214ENST00000543048 CST5P28325 142 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF1A-214ENST00000543048 SMARCA1P28370 1054 aa11.3□□□□□ -0.6
TNFRSF1A-214ENST00000543048 BMP8BP34820 402 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms