RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 CCNL1Q9UK58 526 aaPredicted RBP9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 PNPLA7Q6ZV29 1317 aa9.06□□□□□ -0.96
PRKAB1-207ENST00000542698 DCAF8L1A6NGE4 600 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 E7EVH7 732 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 MYO1CO00159 1063 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 H2AFXP16104 143 aaPredicted RBP9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 EPHB4P54760 987 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 ATP2C1P98194 919 aaPredicted RBP9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 KRT71Q3SY84 523 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 MSL1Q68DK7 614 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 RAD9BQ6WBX8 426 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 SYCE1Q8N0S2 351 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 FBXL16Q8N461 479 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 RIC8AQ9NPQ8 531 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 PPANQ9NQ55 473 aaKnown RBP9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 BSDC1Q9NW68 430 aaPredicted RBP9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 FRMPD2Q68DX3 1309 aaPredicted RBP9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 DIP2AQ14689 1571 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 FAM205CA6NFA0 338 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 GCNT3O95395 438 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 NF2P35240 595 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 STAT1P42224 750 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 LIG3P49916 1009 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 C2orf54Q08AI8 447 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 ERFEQ4G0M1 354 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 RASGRP2Q7LDG7 609 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 PLCD3Q8N3E9 789 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 DYNLL2Q96FJ2 89 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 EPB41L5Q9HCM4 733 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 SAMD15Q9P1V8 674 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 STK17AQ9UEE5 414 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 FAM184BQ9ULE4 1060 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 KDM3AQ9Y4C1 1321 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 NMT2O60551 498 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 CTNNA2P26232 953 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 CTNNA1P35221 906 aaKnown RBP9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 KIF11P52732 1056 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 LRRC41Q15345 812 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 GRIPAP1Q4V328 841 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 USP17L2Q6R6M4 530 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 HOOK3Q86VS8 718 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 ELOA2Q8IYF1 753 aaPredicted RBP9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 CHP1Q99653 195 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 RNF14Q9UBS8 474 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 PCDHA13Q9Y5I0 950 aa9.05□□□□□ -0.96
PRKAB1-207ENST00000542698 TCHHQ07283 1943 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 A0A1W2PRG0 241 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 USP17L3A6NCW0 530 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 USP17L4A6NCW7 530 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 MOCS3O95396 460 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 VIMP08670 466 aaKnown RBP9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 H2AFZP0C0S5 128 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 VSNL1P62760 191 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 MTMR3Q13615 1198 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 H2AFVQ71UI9 128 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 USP17L1Q7RTZ2 530 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 SH3GLB2Q9NR46 395 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 ATP6V0A2Q9Y487 856 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 KRIT1O00522 736 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 PRDX5P30044 214 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 BTDP43251 543 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 APBA1Q02410 837 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 ZRSR2Q15696 482 aaKnown RBP9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 PTPROQ16827 1216 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 TTC19Q6DKK2 380 aaPredicted RBP9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 BRINP3Q76B58 766 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 LRRC47Q8N1G4 583 aaKnown RBP9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 RBM17Q96I25 401 aaKnown RBP9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 C8orf37Q96NL8 207 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 KRT12Q99456 494 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 DCP1AQ9NPI6 582 aaPredicted RBP9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 SWAP70Q9UH65 585 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 DDX25Q9UHL0 483 aaKnown RBP9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 ANO9A1A5B4 782 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 SPOPO43791 374 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 PPFIA4O75335 1185 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 HEXIM1O94992 359 aaKnown RBP9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 SLC7A5Q01650 507 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 PPP1R7Q15435 360 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 CCDC91Q7Z6B0 441 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 MYCT1Q8N699 235 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 SMCR8Q8TEV9 937 aaPredicted RBP9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 SCLT1Q96NL6 688 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 LIMA1Q9UHB6 759 aaKnown RBP9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 AMFRQ9UKV5 643 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 KIAA1024Q9UPX6 916 aa9.04□□□□□ -0.96
PRKAB1-207ENST00000542698 UBE2Q2LH0YL09 131 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 CHMP2AO43633 222 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 CYP2D6P10635 497 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 CASP7P55210 303 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 GTF2IP78347 998 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 DPYDQ12882 1025 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 SEL1L2Q5TEA6 688 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 U2AF1L4Q8WU68 220 aaKnown RBP9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 PAIP2Q9BPZ3 127 aaKnown RBP9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 PHF20Q9BVI0 1012 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 EPB41L4AQ9HCS5 686 aaPredicted RBP9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 KCNK9Q9NPC2 374 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 CTTNBP2NLQ9P2B4 639 aa9.03□□□□□ -0.96
PRKAB1-207ENST00000542698 HDAC6Q9UBN7 1215 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms