RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 LCORLQ8N3X6 602 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 YY1AP1Q9H869 796 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 RIC8AQ9NPQ8 531 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 RAB21Q9UL25 225 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 SLIT1O75093 1534 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 FAM13AO94988 1023 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 PRCPP42785 496 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 FXR1P51114 621 aaKnown RBP eCLIP14.33□□□□□ -0.126e-7■■■■□ 19.4
DNMT1-203ENST00000540357 SARNPP82979 210 aaKnown RBP14.33□□□□□ -0.12
DNMT1-203ENST00000540357 DPYDQ12882 1025 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 SMCO2A6NFE2 343 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 SASH3O75995 380 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 GRIPAP1Q4V328 841 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 C10orf76Q5T2E6 689 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 LRRC31Q6UY01 552 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 ZSCAN29Q8IWY8 852 aaPredicted RBP14.33□□□□□ -0.12
DNMT1-203ENST00000540357 HOMER3Q9NSC5 361 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 NFU1Q9UMS0 254 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 KDM3AQ9Y4C1 1321 aa14.33□□□□□ -0.12
DNMT1-203ENST00000540357 BCAMP50895 628 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 NLRP3Q96P20 1036 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.32□□□□□ -0.12
DNMT1-203ENST00000540357 PRKAB2O43741 272 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 GYPCP04921 128 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 GUCY2CP25092 1073 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 GPKOWQ92917 476 aaPredicted RBP eCLIP14.32□□□□□ -0.122e-7■■□□□ 12.3
DNMT1-203ENST00000540357 OSBPL9Q96SU4 736 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 NDST4Q9H3R1 872 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 SOS2Q07890 1332 aaPredicted RBP14.32□□□□□ -0.12
DNMT1-203ENST00000540357 SERPING1P05155 500 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 ERCC3P19447 782 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 HIBADHP31937 336 aaKnown RBP14.32□□□□□ -0.12
DNMT1-203ENST00000540357 CCDC63Q8NA47 563 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 GLT8D2Q9H1C3 349 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 CPSF2Q9P2I0 782 aaKnown RBP14.32□□□□□ -0.12
DNMT1-203ENST00000540357 SALL1Q9NSC2 1324 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 PNMA1Q8ND90 353 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 KAZALD1Q96I82 304 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 MAP3K14Q99558 947 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 ANKZF1Q9H8Y5 726 aa14.32□□□□□ -0.12
DNMT1-203ENST00000540357 HLA-DOAP06340 250 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 TBX2Q13207 712 aaPredicted RBP14.31□□□□□ -0.12
DNMT1-203ENST00000540357 DRP2Q13474 957 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 RNF10Q8N5U6 811 aaKnown RBP14.31□□□□□ -0.12
DNMT1-203ENST00000540357 HDAC9Q9UKV0 1011 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 PGRMC1O00264 195 aaKnown RBP14.31□□□□□ -0.12
DNMT1-203ENST00000540357 ATP2A1O14983 1001 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 ZNF804AQ7Z570 1209 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 NELFCDQ8IXH7 590 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 NOA1Q8NC60 698 aaKnown RBP14.31□□□□□ -0.12
DNMT1-203ENST00000540357 SH3GLB2Q9NR46 395 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 FRMD4BQ9Y2L6 1034 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 GRID2IPA4D2P6 1211 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 KIF1CO43896 1103 aaKnown RBP14.31□□□□□ -0.12
DNMT1-203ENST00000540357 BIRC3Q13489 604 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 IGDCC4Q8TDY8 1250 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 KIFC2Q96AC6 838 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 PCK1P35558 622 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 EIF3BP55884 814 aaKnown RBP14.31□□□□□ -0.12
DNMT1-203ENST00000540357 ILDR1Q86SU0 546 aaPredicted RBP14.31□□□□□ -0.12
DNMT1-203ENST00000540357 RAB3IPQ96QF0 476 aaPredicted RBP14.31□□□□□ -0.12
DNMT1-203ENST00000540357 STK17AQ9UEE5 414 aa14.31□□□□□ -0.12
DNMT1-203ENST00000540357 ATP2C1P98194 919 aaPredicted RBP14.3□□□□□ -0.12
DNMT1-203ENST00000540357 TSNAXIP1Q2TAA8 658 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 EEF2KMTQ96G04 330 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 NYXQ9GZU5 481 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 SNX12Q9UMY4 172 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 PLAAQ9Y263 795 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 TRIM49BA6NDI0 452 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 MEFVO15553 781 aaPredicted RBP14.3□□□□□ -0.12
DNMT1-203ENST00000540357 LUC7L3O95232 432 aaKnown RBP14.3□□□□□ -0.12
DNMT1-203ENST00000540357 H2AFZP0C0S5 128 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 TMTC3Q6ZXV5 915 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 H2AFVQ71UI9 128 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 USP37Q86T82 979 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 N4BP2L2Q92802 583 aaPredicted RBP14.3□□□□□ -0.12
DNMT1-203ENST00000540357 SUGCTQ9HAC7 445 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 MAP2K7O14733 419 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 PPARDQ03181 441 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 LRRC63Q05C16 580 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 TRAF1Q13077 416 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 NLRP14Q86W24 1093 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 MSL3Q8N5Y2 521 aaKnown RBP14.3□□□□□ -0.12
DNMT1-203ENST00000540357 SPATA4Q8NEY3 305 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 ATP6V0A2Q9Y487 856 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 CDC25AP30304 524 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 IRAK1P51617 712 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 NBPF9Q3BBW0 867 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 LRCH2Q5VUJ6 765 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 LARP4BQ92615 738 aaKnown RBP14.3□□□□□ -0.12
DNMT1-203ENST00000540357 DPH5Q9H2P9 285 aa14.3□□□□□ -0.12
DNMT1-203ENST00000540357 WDR17Q8IZU2 1322 aa14.29□□□□□ -0.12
DNMT1-203ENST00000540357 ZNF18P17022 549 aa14.29□□□□□ -0.12
DNMT1-203ENST00000540357 NBPF5PQ86XG9 351 aaPredicted RBP14.29□□□□□ -0.12
DNMT1-203ENST00000540357 PPFIBP2Q8ND30 876 aa14.29□□□□□ -0.12
DNMT1-203ENST00000540357 P3H4Q92791 437 aa14.29□□□□□ -0.12
DNMT1-203ENST00000540357 ATP6V1G3Q96LB4 118 aa14.29□□□□□ -0.12
DNMT1-203ENST00000540357 PANK4Q9NVE7 773 aa14.29□□□□□ -0.12
DNMT1-203ENST00000540357 FTCDO95954 541 aa14.29□□□□□ -0.12
DNMT1-203ENST00000540357 XRCC5P13010 732 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms